cluster # 7721

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7721 cluster # 7721 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7721#0 length = 760 sequences # 6

consensus_7721#1 length = 551 sequences # 1
consensus_7721#2 length = 446 sequences # 1

consensusID : consensus_7721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 760
fasta sequence

                              [CCGCCCACGCGTCCGGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAACTCTTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCCAGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCACTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACGCGCAAGATCTTAAACTGAAAGTGAAACAAACCCAAGAGGAGTCCCGTTACTAGAGTTACATGTGTATGCTAGTTTGTTTTTGTTTGCTTTTGGCATCATTACACATGTGCCCTGTACAGACGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGGTAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCACGTGG-AAATGTTGAAGGGAATTCAAACATTTTCGCATTGTGGTCATGAATTAGGAATAAACTTCTGGCTTTTTCAGGATCGT]

[+] EMBL BM606375             [CCGCCCACGCGTCCGGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAACTCTTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCCAGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCACTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACGCGCAAGATCTTAAACTGAAAGTGAAACAAACCCAAGAGGAGTCCCGTTACTAGAGTTACATGTGTATGCTAGTTTGTTTTTGTTTGCTTTTGGCATCATTACACATGTGCCCTGTACAGGCGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGGTAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCACGTGGCAAATGTTGAAGGGAATTCA                                                          ]
[+] EMBL BX621709             [                                 GAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAACTCTTCGTCCGGATTCGAGGAAAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCCAGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCACTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACGCGCAAGATCTTAAACTGAAAGTGAAACAAACCCAAGAGGAGTCCCGTTACTAGAGTTACATGTGTGTGCTAGTTTGTTTTTGTTTGCTTTTGGCATCATTACACATGTGCCCTGTACAGACGGTTACTCCCCCACACACCTGCACATGCGCTTTCTAAGGGTAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCATGTGG AAATGTTAAAGGAAATTCAAACATTTTCGCATTGTGGTCATGAATTAng                            ]
[+] EMBL BM640824             [                                                                                                                                      ccgCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAACTCGTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCCAGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCACTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACGCGCAAGATCTTAAACTGAAAGTGAAACAAACCCAAGAAGAGTCCCGTTACTAGAGTTACATGTGTATGCTAGTTTGTTTTTGTTTGCTTTTGGCATCATTACACATGTGCCCTGTACAGACGGTTACTCCTCCCCACACCTGCACATGCGCTTTCTAAGGGTAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCACGTGG AAATGTTGAAGGGAATTCAAACATTTTCGC                                               ]
[+] EMBL AGA280819            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ttTTTTGTCATCTTTACACATGTGCCCTGTACAGACGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGATAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCACGTGG AAATGTTGAAGGGAATTCAAACATTTTCGCATTGTGGTCATGAATTAGGAATAAACTTCTGGCTTTTTCAGGATCGT]
[-] EMBL AGA282441            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ttTTTTGTCATCTTTACACATGTGCCCTGTACAGACGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGATAGCCAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCCTATCCACGTGG AAATGTTGAAGGGAATTCAAACATTTTCGCATTGTGGTCATGAATTAGGAATAAACTTCTGGCTTTTT         ]
[+] EMBL BX614928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CACGTGCACATGCGCTTTCAAAGGATAGCTAATAAGTAAAGTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTTGTTTTATATTCTTATCAATGTGG AAATGTTGAAGGGAAATCAAACATTTTCGCATTGTGGTCATGAATTAGGAATAAACTTCTGGCTTTT          ]




>consensus_7721#0
CCGCCCACGCGTCCGGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACG
AGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGAT
GATGATGACGATAGTATCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAAC
TCTTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTT
ATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCC
AGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCA
CTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACG
CGCAAGATCTTAAACTGAAAGTGAAACAAACCCAAGAGGAGTCCCGTTACTAGAGTTACA
TGTGTATGCTAGTTTGTTTTTGTTTGCTTTTGGCATCATTACACATGTGCCCTGTACAGA
CGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGGTAGCCAATAAGTAAAGTTT
CTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAGTTTT
GTTTTATATTCCTATCCACGTGGAAATGTTGAAGGGAATTCAAACATTTTCGCATTGTGG
TCATGAATTAGGAATAAACTTCTGGCTTTTTCAGGATCGT

consensusID : consensus_7721#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 551
fasta sequence

                              [CCGCCCACGCGTCCGAACGGGTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTTGCGCCCGATTCGGTGGACAGGATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACCTAGCAACCACAATGAATATGTAGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCCAGCCCTGCGCGACGACGTCCTCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTGCACCACCAGCATTCAGACGATAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTACGACGCCCTGAACGATGATTCCAATTCGTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGC]

[+] EMBL BM621470             [CCGCCCACGCGTCCGAACGGGTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTTGCGCCCGATTCGGTGGACAGGATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACCTAGCAACCACAATGAATATGTAGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCCAGCCCTGCGCGACGACGTCCTCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTGCACCACCAGCATTCAGACGATAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTACGACGCCCTGAACGATGATTCCAATTCGTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGC]




>consensus_7721#1
CCGCCCACGCGTCCGAACGGGTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTT
GCGCCCGATTCGGTGGACAGGATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACCT
AGCAACCACAATGAATATGTAGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCC
AGCCCTGCGCGACGACGTCCTCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTG
CACCACCAGCATTCAGACGATAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAG
AGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTT
GAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATTACGACGCCCTGAAC
GATGATTCCAATTCGTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCG
GTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGG
GAGATGGCAGC

consensusID : consensus_7721#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 446
fasta sequence

                              [CCGGCACCTTCATGCGTCTTCCGACAGTATGACCGCAGCACCTGCGTTGTCGGTCAACGGGTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTTGCGCCCGATTCGGTGGACAGGATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACATAACAACCACAATGAATATGTAGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCCAGCCCTGCGCGACGACGTCCTCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTGCACCACCAGCATTCAGACGATAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATT]

[+] EMBL BM605027             [CCGGCACCTTCATGCGTCTTCCGACAGTATGACCGCAGCACCTGCGTTGTCGGTCAACGGGTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTTGCGCCCGATTCGGTGGACAGGATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACATAACAACCACAATGAATATGTAGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCCAGCCCTGCGCGACGACGTCCTCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTGCACCACCAGCATTCAGACGATAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTGCGAAGATT]




>consensus_7721#2
CCGGCACCTTCATGCGTCTTCCGACAGTATGACCGCAGCACCTGCGTTGTCGGTCAACGG
GTGGTACCAAAATGTCCCTGCCAAACAAGCGCTTACTGTTGCGCCCGATTCGGTGGACAG
GATCGGCGAACAAAGCAAGCTGAAATGTGATATCGAACATAACAACCACAATGAATATGT
AGTGTTCAGCGACTACGACGTGTTTACTACTCCATCTGCCAGCCCTGCGCGACGACGTCC
TCCTCGTCGTAATTTTTGTCCAGCTTTGAGTTTTGTTTTGCACCACCAGCATTCAGACGA
TAGCCAAGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGA
CATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGATGATGATGA
CGATAGTATCGTTTTCTGCGAAGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7721#1      ------------------------------------------------------------
consensus_7721#2      ----------------------------------------------------------CC 2
consensus_7721#0      CCGCCCACGCGTCCGGAGGAAAATAATGACGAGGAGGAAGACGGCAAGAGTGATTACACG 60
                                                                                  

consensus_7721#1      ------------------------------------CCGCCCACGCGTCCG---AACG-- 19
consensus_7721#2      GGCACCTTCATG-CGTCTTCCGACAGTATGACCGCAGCACCTGCGTTGTCGGTCAACG-- 59
consensus_7721#0      AGCGAGGACATTTCGGATGACGAGGGTACGGATGGCGCAGATGGGCTTGAATATGACGAT 120
                                                           *      *          ***  

consensus_7721#1      GGTGGTACCAA-AATGTC----CCTGCCAAAC-----AAGCGCTTACTGTTGCGCCCGAT 69
consensus_7721#2      GGTGGTACCAA-AATGTC----CCTGCCAAAC-----AAGCGCTTACTGTTGCGCCCGAT 109
consensus_7721#0      GATGATGACGATAGTATCGTTTTCTGCGAAGATTATGACGCCCTGAACGATGATTCCAAC 180
                      * ** *  * * * * **     **** **       * ** ** *  * **   ** * 

consensus_7721#1      TCGGTGGACAGGATCGGCGAACAAAGCA--------AGCTGAAATGTGATATCGAACCTA 121
consensus_7721#2      TCGGTGGACAGGATCGGCGAACAAAGCA--------AGCTGAAATGTGATATCGAACATA 161
consensus_7721#0      TCTTCGTCCGGATTCGAGGAGAAGAAGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTT 240
                      **   *  * *  ***  **  * *           * ** ***   * *   * ** * 

consensus_7721#1      GCAACCACAATGAA---TATGTAGTGTTCAGCG-ACTACGACGTGTTTACTACTCCATCT 177
consensus_7721#2      ACAACCACAATGAA---TATGTAGTGTTCAGCG-ACTACGACGTGTTTACTACTCCATCT 217
consensus_7721#0      ATGAGAGCATGGGACTTTGCCTACCGCCAAGCACGCAAAGGCGAATGGGAGATGGCAGCC 300
                         *   **  * *   *   **  *   ***   * * * **  *     *   ** * 

consensus_7721#1      GCCAGCCCTGCGCGACGACGTC--CTCCTCGTCGTA-----ATTTTTG-----TCCAGCT 225
consensus_7721#2      GCCAGCCCTGCGCGACGACGTC--CTCCTCGTCGTA-----ATTTTTG-----TCCAGCT 265
consensus_7721#0      AGAGATAGAGAGCGATTCCGGAAGCGCATCGCCGAACTAGAACCTTTGCTAGGTCCAGCA 360
                               * ****   **    * * *** ** *     *  ****     ****** 

consensus_7721#1      TTGAGTTTTGTTTTGCACCACCA---GCATTCAGA-CGAT--AGCCAAGAGGAAAATAAT 279
consensus_7721#2      TTGAGTTTTGTTTTGCACCACCA---GCATTCAGA-CGAT--AGCCAAGAGGAAAATAAT 319
consensus_7721#0      CTACAGCCAGCGTTACGTGATAAAGTGTACTCCGAGCGGTTCAGCGGGGAGGAAAGTACG 420
                       *       *  ** *   *  *   * * ** ** ** *  ***   ******* **  

consensus_7721#1      GACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGT 339
consensus_7721#2      GACGAGGAGGAAGACGGCAAGAGTGATTACACGAGCGAGGACATTTCGGATGACGAGGGT 379
consensus_7721#0      CGCAAGATCTTAAACTG--AAAGTGAA-ACAAACCCAAGAGGAGTCCCGTTACTAGAGTT 477
                        * **     * ** *  * *****  ***    * **   * * * * *      * *

consensus_7721#1      ACGGATG-GCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTG 398
consensus_7721#2      ACGGATG-GCGCAGATGGGCTTGAATATGACGATGATGATGACGATAGTATCGTTTTCTG 438
consensus_7721#0      ACATGTGTATGCTAGTTTGTTTTTGTTTGCTTTTGGC-ATCATTACACATGTGCCCTGTA 536
                      **   **   **   *  * **   * **    **   ** *  * *     *   * * 

consensus_7721#1      CGAA-GATTACGACGCCCTGAACGATGATTCCAATTCGTCGTCCGGATTCGAGGAGAAGA 457
consensus_7721#2      CGAA-GATT--------------------------------------------------- 446
consensus_7721#0      CAGACGGTTACTCCCCCACACACCTGCACATGCGCTTTCAAAGGGTAGCCAATAAGTAAA 596
                      *  * * **                                                   

consensus_7721#1      AGGTTCGGTTCAACTCAAAACCGGTGGTGCACGTTATGAGAGCATGGGACTTTGCCTACC 517
consensus_7721#2      ------------------------------------------------------------
consensus_7721#0      GTTTCTGCATTATATTTATACGGTAAAAACAGTTTTTGCTTTAATTTAAACATTACAAAG 656
                                                                                  

consensus_7721#1      GCCAAGCACGCAAAGGCGAATGGGAGATGGCAGC-------------------------- 551
consensus_7721#2      ------------------------------------------------------------
consensus_7721#0      TTTTGTTTTATATTCCTATCCACGTGGAAATGTTGAAGGGAATTCAAACATTTTCGCATT 716
                                                                                  

consensus_7721#1      --------------------------------------------
consensus_7721#2      --------------------------------------------
consensus_7721#0      GTGGTCATGAATTAGGAATAAACTTCTGGCTTTTTCAGGATCGT 760