cluster # 7742

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Anopheles gambiae
cluster # 7742 cluster # 7742 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7742#0 length = 1583 sequences # 4
consensus_7742#1 length = 1006 sequences # 2

consensus_7742#2 length = 805 sequences # 1
consensus_7742#3 length = 660 sequences # 1

consensusID : consensus_7742#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1583
fasta sequence

                              [CCGCCCACGCGTCCGTGAAAGCTTATTTTTAATCGAATAAAAACACGGCACCACAAACAAACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATACATATATATTTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAGGACAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTCAGAAAAGATTTCGAGAACAAGGATAAGAGGATGATCTGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATTGAAAAACAATTTAAAAATGAAGAAACACAGTACAGAACAAGCTATTTAATGTATATGAGTAGATGTGGTGTGTTCTATCTAGGGCGCAAAGGTGTGCAGAACTCTTTGCTACAGCAAACGATCACCGTGCCTTAAAATTGAGTTACACGATACACACATTTTGGTAGGATGTTTTGGCCACACAGGCACACGATACACCTCAGTGATTGCACAATTTGAAGAGAGTTGTCATATACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTGTGAGTAAATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGAAGAGGGAACACAACAAAACGGCAAACACACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGATATGGATTTCAATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACTTTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACAGTGGGGGCGAGCAACAGCAAACCAACTCCATGTGTTAGAAACATGTTTTCGATCCGCAAAGACACATACCAACACATACTTTCTCTTGTACGAGCAACTTTGTACAAGACAACATTTGAACGTTTCACTATCCTGGGGTTAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACTGTTGGAACACGTTTAGTGGTGTA]

[+] EMBL BM649288             [CCGCCCACGCGTCCGTGAAAGCTTATTTTTAATCGAATAAAAACACGGCACCACAAACAAACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATACATATATATTTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAGGACAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTT AACGAT AAATAGTAGAACTAACGTTACCAAGTAAATGT AAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX606112             [                                                                                                                                                                           TTCTCCAACACGATTCCATTCCCGACTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAACAGGTGTGACTAGTGAGAAAAGAGAGAACAAAAACACATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCTCCTTAAAAGTCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCCAACAGGAATCCCAACAGGACAGGACAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGCGCAATCGATATTATCCCTTCAGCGACCCAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCGTGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTCAGAAAAGATTTCGAGAACAAGGATAAGAGGATGATCTGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATTGAAAAACAATTTAAAAATGAAGAAACACAGTACAGAACAAGCTATTTAATGTATATGAGTAGATGTGGTGTGTTCTATCTAGGGCGCAAAGGTGTGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM640188             [                                                                                                                                                                                                                                                                                                                                                                                        ccGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAGGACAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTAAGAAAAGATTTCGAGAACAAGGATAAGAGGATGAACCGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATTGAAAAACAATTTAAAATTGAATAAACACAGTACAGAACAAGCTATATAATGTATATGAGTAGATGTGGTGTGTTCTATCTAGGGCGCAAAGGTGTGCAGAACTCTTTGCTACAGCAAACGATCACCGTGCCTTAAAATTGAGTTACACGATACACACATTTTGGTAGGATGTTTTGGCCACACAGGCACACGATACACCTCAGTGATTGCACAATTTGAAGAGAGTTGTCATATACACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM643386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgACACGATACACACATTTTGGTAGGATGTTTTGGCCACACAGGCACACGATACACCTCAGTGATTGCACAATTTGAAGAGAGTTGTCATATACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTGTGAGTAAATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGAAGAGGGAACACAACAAAACGGCAAACACACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGATATGGATTTCAATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACTTTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACAGTGGGGGCGAGCAACAGCAAACCAACTCCATGTGTTAGAAACATGTTTTCGATCCGCAAAGACACATACCAACACATACTTTCTCTTGTACGAGCAACTTTGTACAAGACAACATTTGAACGTTTCACTATCCTGGGGTTAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACTGTTGGAACACGTTTAGTGGTGTA]




>consensus_7742#0
CCGCCCACGCGTCCGTGAAAGCTTATTTTTAATCGAATAAAAACACGGCACCACAAACAA
ACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTT
AAAGCATACATATATATTTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAAC
ACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCT
ATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCA
ACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCT
CCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTAC
CTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAGGACAGGAAAAATGGAAGTA
AAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGAC
ACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGA
AAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGT
AAAATGGCAAGCAATTTGTTGCAAATTCAGAAAAGATTTCGAGAACAAGGATAAGAGGAT
GATCTGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATT
GAAAAACAATTTAAAAATGAAGAAACACAGTACAGAACAAGCTATTTAATGTATATGAGT
AGATGTGGTGTGTTCTATCTAGGGCGCAAAGGTGTGCAGAACTCTTTGCTACAGCAAACG
ATCACCGTGCCTTAAAATTGAGTTACACGATACACACATTTTGGTAGGATGTTTTGGCCA
CACAGGCACACGATACACCTCAGTGATTGCACAATTTGAAGAGAGTTGTCATATACACAC
ACACACACACACACACACCTAAAACTACCTTTGAGTGCTGTGAGTAAATACATTGCCAGA
AATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGAAGAGGGAACACAACAAAAC
GGCAAACACACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGATATGGATTT
CAATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAAAGGCA
TTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACTTTACA
CTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACAGTGGG
GGCGAGCAACAGCAAACCAACTCCATGTGTTAGAAACATGTTTTCGATCCGCAAAGACAC
ATACCAACACATACTTTCTCTTGTACGAGCAACTTTGTACAAGACAACATTTGAACGTTT
CACTATCCTGGGGTTAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACT
GTTGGAACACGTTTAGTGGTGTA

consensusID : consensus_7742#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1006
fasta sequence

                              [CCGGCGATATAAAATGTTGGTTGGTCTTTCTCCCCACTTGCCCGAGCTCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTTATGATGCGCGCTAGATTAGTTAATGTAGTAGCTACGCTCTTTCCAAGCCATAGGGGTTTGCATGAAAGCTTATTTTTAATCGAATAAAAACACGGCACCACAAACAAACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATACATATATATTTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAAGACAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTAAGAAAAGATTTCGAGAACAAGGATAAGAGGATGAACCGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATTGAAAAACAATTTAAAATTGAATAAACACAGTACAGAACAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACCACACATAA]

[+] EMBL BM621025             [CCGGCGATATAAAATGTTGGTTGGTCTTTCTCCCCACTTGCCCGAGCTCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTTATGATGCGCGCTAGATTAGTTAATGTAGTAGCTACGCTCTTTCCAAGCCATAGGGGTTTGCATGAAAGCTTATTTTTAATCGAATAAAAACACGGCACCACAAACAAACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATACATATATATTTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09RDF             [                                                                                                                                                                                                                          aaACAAACACACCTCTACGGGAA CTGCAATACGTTGTTAAAGCATACATATATA TTAAATATATTCATATTGTGACAGTCATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTGTTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTCTAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAAGACAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTAAGAAAAGATTTCGAGAACAAGGATAAGAGGATGAACCGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAATGAGTTTAGGAGATTGAAAAACAATTTAAAATTGAATAAACACAGTACAGAACAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACCACACATAA]




>consensus_7742#1
CCGGCGATATAAAATGTTGGTTGGTCTTTCTCCCCACTTGCCCGAGCTCTCAAGCTGGAC
GACTGTGGCGTTCGTGGGTTACAAATTGTTATGATGCGCGCTAGATTAGTTAATGTAGTA
GCTACGCTCTTTCCAAGCCATAGGGGTTTGCATGAAAGCTTATTTTTAATCGAATAAAAA
CACGGCACCACAAACAAACAAACACGTACCAGATTGTATCACAAACACACCTCTACGGGA
ACCTGCAATACGTTGTTAAAGCATACATATATATTTAAATATATTCATATTGTGACAGTC
ATTCCTTTTTCTCCAACACGATTCCATTCCCGGCTCTGGAGCAGACTGGAGGATCAATTG
TTGGATTAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAA
AAACGCATAGCTCTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCAT
TTCTAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGT
ACGTTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAAGA
CAGGAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGAT
ATTATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATT
TGTTGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAA
CGTTACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTAAGAAAAGATTTCGAG
AACAAGGATAAGAGGATGAACCGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGAT
AATGAGTTTAGGAGATTGAAAAACAATTTAAAATTGAATAAACACAGTACAGAACAAGCT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACCACACATAA

consensusID : consensus_7742#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 805
fasta sequence

                              [GTGTGTGTGTTTGTGTGCGTATCTTAGCTGAGTTTTTGGAGATGTGTGGGTTAAAAGCTACTTGTAATCCTTGTAATCTAGTTTGTACCGTCAGGTGGAGAAGAAACAGGGCAACTAAGGGGGGAGATGCAAGTGTAAAAGAATATGGAAAAATATGAAACGATGGGTCCGACTGAACACAACACGTTTGATGATTTAAAAAAAAGATGCAATGACACACACACTCACACACACACACACACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTCTGAGTAAATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGGAGAGGGAACATAACAAAAAGGCAAACAAACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGGTATGGATTTCATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACTTTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACAGTGGGGGCGAGCAACGGCAAACCAACCCCATGGAACATGTTCTCGTTCCGCATACACATAACCAACACACACACTTTCTCTTGTACGAGCAACTTTGTACAAGAAAACTTTTGAACGTTTCACTATCCTGGGGTAAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACTGTTGGAACACGTTTAGTGGTGTAGC]

[+] EMBL BX612814             [GTGTGTGTGTTTGTGTGCGTATCTTAGCTGAGTTTTTGGAGATGTGTGGGTTAAAAGCTACTTGTAATCCTTGTAATCTAGTTTGTACCGTCAGGTGGAGAAGAAACAGGGCAACTAAGGGGGGAGATGCAAGTGTAAAAGAATATGGAAAAATATGAAACGATGGGTCCGACTGAACACAACACGTTTGATGATTTAAAAAAAAGATGCAATGACACACACACTCACACACACACACACACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTCTGAGTAAATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGGAGAGGGAACATAACAAAAAGGCAAACAAACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGGTATGGATTTCATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACTTTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACAGTGGGGGCGAGCAACGGCAAACCAACCCCATGGAACATGTTCTCGTTCCGCATACACATAACCAACACACACACTTTCTCTTGTACGAGCAACTTTGTACAAGAAAACTTTTGAACGTTTCACTATCCTGGGGTAAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACTGTTGGAACACGTTTAGTGGTGTAGC]




>consensus_7742#2
GTGTGTGTGTTTGTGTGCGTATCTTAGCTGAGTTTTTGGAGATGTGTGGGTTAAAAGCTA
CTTGTAATCCTTGTAATCTAGTTTGTACCGTCAGGTGGAGAAGAAACAGGGCAACTAAGG
GGGGAGATGCAAGTGTAAAAGAATATGGAAAAATATGAAACGATGGGTCCGACTGAACAC
AACACGTTTGATGATTTAAAAAAAAGATGCAATGACACACACACTCACACACACACACAC
ACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTCTGAGTAAATACATT
GCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGGAGAGGGAACATAA
CAAAAAGGCAAACAAACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTCATGGTAT
GGATTTCATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAAGCCGGTCAA
AGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAACTTTGCAACT
TTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTCGATTGGACA
GTGGGGGCGAGCAACGGCAAACCAACCCCATGGAACATGTTCTCGTTCCGCATACACATA
ACCAACACACACACTTTCTCTTGTACGAGCAACTTTGTACAAGAAAACTTTTGAACGTTT
CACTATCCTGGGGTAAAATGGGGCTGAAGAGAGTTGTTTTTAACGCGACACTTATTTACT
GTTGGAACACGTTTAGTGGTGTAGC

consensusID : consensus_7742#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence

                              [AGCAGATCGCCCCGACGGTNCATTTTACAAGGGTGCTGTTACGGATCATCGCACAGATTGTNTGTGTGTGTGTTAGTGAGTGTATTTTGTGTGCAAAGTAGTAGTGCAACGTTTGTCAGTAGATGAAGACAGTTTTTACCGGTAAAACCACATTTCAATACATAAAACACATACATAAACGACGGACATTTGTTGTTTGCGCCCCAGAAACGTGCAATTGTATGGTGGTGTAGATAGGCAATAGGGAGCTTAAAGTCTAGCAGGTGCGATATACAAATGTTGGTTGGTCTTTCTCCCCACTTGCCCGAGGCTCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTTATGATGCGCGCTAGATTACGTTAATGTAGTAGCTACACTCTTTCCAAGCATAGGGGTTTGCNTGAAAGCTCTATTCTTNAATCGACATAAAAACACGGACCACAAACAAACAAACACGTACCAGATTGGATCACAAAACACCTCTACGGGAACCTGCAATACGTTGTTCAAGTATACATATATTCTNTAACATATATTNCATATTGTGACAGTCATTCCTTTNTCTCCAAACANNCGATTCCATATCCCGACTACTNGGAGCAGACTGGACGGATCACACATAGTGGCATTAATAGNTCTATAGAC]

[+] EMBL AL696813             [AGCAGATCGCCCCGACGGTNCATTTTACAAGGGTGCTGTTACGGATCATCGCACAGATTGTNTGTGTGTGTGTTAGTGAGTGTATTTTGTGTGCAAAGTAGTAGTGCAACGTTTGTCAGTAGATGAAGACAGTTTTTACCGGTAAAACCACATTTCAATACATAAAACACATACATAAACGACGGACATTTGTTGTTTGCGCCCCAGAAACGTGCAATTGTATGGTGGTGTAGATAGGCAATAGGGAGCTTAAAGTCTAGCAGGTGCGATATACAAATGTTGGTTGGTCTTTCTCCCCACTTGCCCGAGGCTCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTTATGATGCGCGCTAGATTACGTTAATGTAGTAGCTACACTCTTTCCAAGCATAGGGGTTTGCNTGAAAGCTCTATTCTTNAATCGACATAAAAACACGGACCACAAACAAACAAACACGTACCAGATTGGATCACAAAACACCTCTACGGGAACCTGCAATACGTTGTTCAAGTATACATATATTCTNTAACATATATTNCATATTGTGACAGTCATTCCTTTNTCTCCAAACANNCGATTCCATATCCCGACTACTNGGAGCAGACTGGACGGATCACACATAGTGGCATTAATAGNTCTATAGAC]




>consensus_7742#3
AGCAGATCGCCCCGACGGTNCATTTTACAAGGGTGCTGTTACGGATCATCGCACAGATTG
TNTGTGTGTGTGTTAGTGAGTGTATTTTGTGTGCAAAGTAGTAGTGCAACGTTTGTCAGT
AGATGAAGACAGTTTTTACCGGTAAAACCACATTTCAATACATAAAACACATACATAAAC
GACGGACATTTGTTGTTTGCGCCCCAGAAACGTGCAATTGTATGGTGGTGTAGATAGGCA
ATAGGGAGCTTAAAGTCTAGCAGGTGCGATATACAAATGTTGGTTGGTCTTTCTCCCCAC
TTGCCCGAGGCTCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTTATGATG
CGCGCTAGATTACGTTAATGTAGTAGCTACACTCTTTCCAAGCATAGGGGTTTGCNTGAA
AGCTCTATTCTTNAATCGACATAAAAACACGGACCACAAACAAACAAACACGTACCAGAT
TGGATCACAAAACACCTCTACGGGAACCTGCAATACGTTGTTCAAGTATACATATATTCT
NTAACATATATTNCATATTGTGACAGTCATTCCTTTNTCTCCAAACANNCGATTCCATAT
CCCGACTACTNGGAGCAGACTGGACGGATCACACATAGTGGCATTAATAGNTCTATAGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      AGCAGATCGCCCCGACGGTNCATTTTACAAGGGTGCTGTTACGGATCATCGCACAGATTG 60
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      -GTGTGTGTGTTTGTGTGCGTATCTTAGCTGAGT--TTTTGGAGATGTGTGGGTTAAAAG 57
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      TNTGTGTGTGTGTTAGTGAGTGTATTTTGTGTGCAAAGTAGTAGTGCAACGTTTGTCAGT 120
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      -CTACTTGTAATCCTTGTAATCTAGTTTGTACCGTCAGGTGGAGAAGAAACAGGGCAACT 116
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      AGATGAAGACAGTTTTTACCGGTAAAACCACATTTCAATACATAAAAC-ACATACATAAA 179
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      AAGGGGGGAGA---TGCAAGTGTAAAAGAATATGGAAAAATATGAAACGATGGGTCCGAC 173
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      CGACGGACATTTGTTGTTTGCGCCCCAGAAACG-TGCAATTGTATGGTGGTGTAGATAGG 238
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      TGAACACAACACGTTTGATGATTTAAAAAAAAGATGCAATGACACACACACTCACACACA 233
                                                                                  

consensus_7742#1      ------------------------CCGGCGAT--ATA-AAATGTTGGTTGGTCTTTCTCC 33
consensus_7742#3      CAATAGGGAGCTTAAAGTCTAGCAGGTGCGAT--ATACAAATGTTGGTTGGTCTTTCTCC 296
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      CACACACACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTCTGAGTAA 293
                                                                                  

consensus_7742#1      CCAC-TTGCCCGAG-C-TCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTT 90
consensus_7742#3      CCAC-TTGCCCGAGGC-TCTCAAGCTGGACGACTGTGGCGTTCGTGGGTTACAAATTGTT 354
consensus_7742#0      ------------------------------------------------------------
consensus_7742#2      ATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGGAGAGGG 353
                                                                                  

consensus_7742#1      ATGATGCGCGCTAGATTA-GTTAATGTAGTAGCTACGCTCTTTCCAAGCCATAGGGGTTT 149
consensus_7742#3      ATGATGCGCGCTAGATTACGTTAATGTAGTAGCTACACTCTTTCCAAGC-ATAGGGGTTT 413
consensus_7742#0      ------------------------------------------------CCGCCCACGCGT 12
consensus_7742#2      AACATAACAAAAAGGCAAACAAACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTTC 413
                                                                                  

consensus_7742#1      GCATGAAAGCT-TATT-TTTAATCGA-ATAAAAACACGGCACCACAAACAAACAAACACG 206
consensus_7742#3      GCNTGAAAGCTCTATTCTTNAATCGACATAAAAACACGG-ACCACAAACAAACAAACACG 472
consensus_7742#0      CCGTGAAAGCT-TATT-TTTAATCGA-ATAAAAACACGGCACCACAAACAAACAAACACG 69
consensus_7742#2      ATGGTATGGAT---TTCATTACTCTG-GTTTGAGCAAAGCAATACTTG-GTACAG---TG 465
                           *  * *   **  * * **    *   * **  * *  **      ***     *

consensus_7742#1      TACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATAC 266
consensus_7742#3      TACCAGATTGGATCACAAA-ACACCTCTACGGGAACCTGCAATACGTTGTTCAAGTATAC 531
consensus_7742#0      TACCAGATTGTATCACAAACACACCTCTACGGGAACCTGCAATACGTTGTTAAAGCATAC 129
consensus_7742#2      TATGAAGCCGG-TCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATAT 524
                      **  *    *  *** *   *  ** **    * *  ***** *   *  *  *  *** 

consensus_7742#1      A-TATATATTTAAATATA---TTCATATTGTGACAGTCATTCCTTTTTCTCCAA---CAC 319
consensus_7742#3      A-TATATTCTNTAACATATATTNCATATTGTGACAGTCATTCCTTTNTCTCCAAACANNC 590
consensus_7742#0      A-TATATATTTAAATATA---TTCATATTGTGACAGTCATTCCTTTTTCTCCAA---CAC 182
consensus_7742#2      GCTAAACTTTGCAAC------TTTACACTCCTACATTGCACTGCTGCTGCACGATGAGAT 578
                        ** *   *  **       *  * * *   *** *       *  *   * *      

consensus_7742#1      GATTCCAT-TCCCGGCT------CTGGAGCAGACTG-GA-GGATCA---ATT-GTTGGAT 366
consensus_7742#3      GATTCCATATCCCGACTAC----TNGGAGCAGACTG-GACGGATCACACATA-GTGGCAT 644
consensus_7742#0      GATTCCAT-TCCCGGCT------CTGGAGCAGACTG-GA-GGATCA---ATT-GTTGGAT 229
consensus_7742#2      GATGCATTCCTTCGATTGGACAGTGGGGGCGAGCAACGGCAAACCAACCCCATGGAACAT 638
                      *** *  *    **  *        ** **   *   *    * **       *    **

consensus_7742#1      TAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGC 426
consensus_7742#3      TAATAGNT-CTATAGAC------------------------------------------- 660
consensus_7742#0      TAATAGTTTCTATAGACAGAGAAGCGGTGTGGCTAGTGAGAAAAGAGAGAACAAAAACGC 289
consensus_7742#2      GTTCTCGTTCCGCATACACATAACCAACACACACACTTTCTCTTGTACGAGCAACTTTGT 698
                             * *   * **                                           

consensus_7742#1      ATAGCT---CTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTC 483
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      ATAGCT---CTCCAACATATTCACCCATAACAACAACTAAGCGCACCAAAAAGGCATTTC 346
consensus_7742#2      ACAAGAAAACTTTTGAACGTTTCACTATCCTGGGGTAAAATGGGGCTGAAGAGAGTTGTT 758
                                                                                  

consensus_7742#1      TAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACG 543
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TAACCCATAAAGCTCCTTAAAAGCCCACAAAAGCACATGTAAACCATTGAGCAGCGTACG 406
consensus_7742#2      TTTAACGCGACACTTATTTACTGTTGGAACACGTTTAGTGGTGTAGC------------- 805
                                                                                  

consensus_7742#1      TTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAAGACAG 603
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TTACAATTTTGTACCTTCTTCCAATTAGCAAAAGCCCAAACAGGAATCCCAACAGGACAG 466
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      GAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATT 663
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GAAAAATGGAAGTAAAACGATTTAAATTTGCCCCGCACCCAGTGCGGTGCGATCGATATT 526
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGT 723
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      ATCCCTTCAGCGACACAAAGGGGGGGAAAGGGAAGCGTCTTGTGATATTGATGGATTTGT 586
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      TGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGT 783
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TGTGTAGAGTGTGAAAGTTCATGTGAGAGCGTTTAAACGATAAAATAGTAGAACTAACGT 646
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      TACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTAAGAAAAGATTTCGAGAAC 843
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TACCAAGTAAATGTAAAATGGCAAGCAATTTGTTGCAAATTCAGAAAAGATTTCGAGAAC 706
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      AAGGATAAGAGGATGAACCGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAAT 903
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      AAGGATAAGAGGATGATCTGCTGTTTGTTGTTTGTGTGTATCCGTATACGGTGCGATAAT 766
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      GAGTTTAGGAGATTGAAAAACAATTTAAAATTGAATAAACACAGTACAGAACAAGCTAAA 963
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GAGTTTAGGAGATTGAAAAACAATTTAAAAATGAAGAAACACAGTACAGAACAAGCTATT 826
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAACCACACATAA----------------- 1006
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TAATGTATATGAGTAGATGTGGTGTGTTCTATCTAGGGCGCAAAGGTGTGCAGAACTCTT 886
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TGCTACAGCAAACGATCACCGTGCCTTAAAATTGAGTTACACGATACACACATTTTGGTA 946
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GGATGTTTTGGCCACACAGGCACACGATACACCTCAGTGATTGCACAATTTGAAGAGAGT 1006
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TGTCATATACACACACACACACACACACACACCTAAAACTACCTTTGAGTGCTGTGAGTA 1066
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      AATACATTGCCAGAAATGTGATAGTCCGCCCCACTGCAACACACTTTAGTTTAGAAGAGG 1126
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GAACACAACAAAACGGCAAACACACAGCAATAATGAATTACTCTTTTAAAAATAAGCTTT 1186
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      CATGATATGGATTTCAATTACTCTGGTTTGAGCAAAGCAATACTTGGTACAGTGTATGAA 1246
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GCCGGTCAAAGGCATTCCACTGTTTGCAAATGCAAAAAAATAGTCTAAAATATGCTAAAC 1306
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      TTTGCAACTTTACACTCCTACATTGCACTGCTGCTGCACGATGAGATGATGCATTCCTTC 1366
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      GATTGGACAGTGGGGGCGAGCAACAGCAAACCAACTCCATGTGTTAGAAACATGTTTTCG 1426
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      ATCCGCAAAGACACATACCAACACATACTTTCTCTTGTACGAGCAACTTTGTACAAGACA 1486
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      ------------------------------------------------------------
consensus_7742#3      ------------------------------------------------------------
consensus_7742#0      ACATTTGAACGTTTCACTATCCTGGGGTTAAATGGGGCTGAAGAGAGTTGTTTTTAACGC 1546
consensus_7742#2      ------------------------------------------------------------
                                                                                  

consensus_7742#1      -------------------------------------
consensus_7742#3      -------------------------------------
consensus_7742#0      GACACTTATTTACTGTTGGAACACGTTTAGTGGTGTA 1583
consensus_7742#2      -------------------------------------