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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7881#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 746 fasta sequence
[CCGAATCAGCGGCGGTGAGATTAAATTCATATCTCAATAAATTTCCCGCCGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCTAGAAGGGGAAAAAAACGTTCTGCTGAAAATTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCTGTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACAGAAGGAAACACAAATATATCAGCTTCCGGTGAGAAACAGACACACACACACGCGTATACACGCAAGGCTGACCGAGAACGCGGAACCAACAGCAGTAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTGGCAGTGAATCGCTGCTGCACGCCTCGCAGCAC]
[+] EMBL BM602330 [CCGAATCAGCGGCGGTGAGATTAAATTCATATCTCAATAAATTTCCAACCGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAA GGAAAAAAACGTTCTGCTGAAAATTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTGCTGTGAAACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGCAACCTGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACCGAAGGAAAC ]
[+] EMBL BM591561 [ CCGCCGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCTAGAAGGGGAAAAAAACGTTCTGCTGAAAATTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCTGTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACAGAAGGAAACACAAATATATCAGCTTCCGGTGAGAAACAGACACACACACACGCGTATACACGCAAGGCTGACCGAGAACGCGGAACCAACAGCAGTAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTGGCAGTGAATCGCTGCTGCACGCCTCGCAGCAC]
[+] EMBL BM653148 [ CCG CGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAAGGAAAAAAAAACGTTCTGCTGAAAATTGCATTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCTGTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGCAACCTGCCCGGAACAACTTTCATCTTGTGCGCCCGGGTCCAAGTGACCACACGCAGTCGGAGAAGACCGCGTACGCGATCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGTCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACAGAAGGGAACACAAATATATCAGCTTCCGGTGAGAA ACACACACACGCGCGTATACACGCAAGGCTGGCCGAGAACGCGGAATCAACAGC AGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGACCGGTCACGGCGGACGGTGGCATTG ]
[+] EMBL BM650456 [ ccgGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCTAGAAGGGGAAAAAAACGTTCTGCTGAAAATTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCTGTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACAGAAGGAAACACAAATATATCAGCTTCCGGTGAGAAACAGACACACACACACGCGTATACACGCAAGGCTGACCGAGAACGCGGAACCAACAGCAGTAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTGGCAGTGAATCGCTGCTGCACGC ]
[+] EMBL BM581721 [ ccgATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCTAGAAGGGGAAAAAAACGTTCTGCTGAAAATTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCTGTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGCCGGCTGGTGTCGGAAGTTATTTGCCCGCTACAGAAGGAAACACAAATATATCAGCTTCCGGTGAGAAACAGACACACACACACGCGTATACACGCAAGGCTGACCGAGAACGCGGAACCAACAGCAGTAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTGGCAGTGAATCGCTGCTG ]
consensusID : consensus_7881#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 678 fasta sequence
[CCGCCGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAAGGAAAAAAACGTTCTGCTGAAAATTGCATTCGTGGTGACAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTGCTGTGATACAAAGTGCAAAAAAACACGTGCCGTAAATGCAACCTTTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTGTGCGCCCGGGTCCAAGTGACCACACGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCCGTGGTAGTGTACAGTTCACAGCACCACAGCGCGGTAGTGCCGGCTGTTGTCGGAAGTTATTTGCCCGCTACCGAAGGGAACACAAATATATCAGCTTCCGGTGAGAAACACACACACGCGCGTATACACGCAAGGCTGGCCGAGAACGCGGAATCAACAGCAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGTAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTG]
[+] EMBL BM575501 [CCGCCGAGAAACATCGTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAAGGAAAAAAACGTTCTGCTGAAAATTGCATTCGTGGTGACAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTGCTGTGATACAAAGTGCAAAAAAACACGTGCCGTAAATGCAACCTTTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTGTGCGCCCGGGTCCAAGTGACCACACGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCCGTGGTAGTGTACAGTTCACAGCACCACAGCGCGGTAGTGCCGGCTGTTGTCGGAAGTTATTTGCCCGCTACCGAAGGGAACACAAATATATCAGCTTCCGGTGAGAAACACACACACGCGCGTATACACGCAAGGCTGGCCGAGAACGCGGAATCAACAGCAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGTAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGCATTG]
[+] EMBL BM585212 [ ccgGTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAAGGAAAAAAACGTTCTGCTGAAAATTGCATTCGTGGTGACAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTGCTGTGATACAAAGTGCAAAAAAACACGTGCCGTAAATGCAACCTTTTGCATCCGAAGAAACCTGCCCGGAACAACTTTCATCTTGTGCGCCCGGGTCCAAGTGACCACACGCAGTCGGAGAAGACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGCAAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAATCGTTTGCTAGCCGTGGTAGTGTACAGTTCACAGCACCACAGCGCGGTAGTGCCGGCTGTTGTCGGAAGTTATTTGCCCGCTACCGAAGGCAACACAAATATATCAGCTTCCGGTGAGAAACACACACACGCGCGTATACACGCAAGGCTGGCCGAGAACGCGGAATCAACAGCAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAACATGAAGAAGCGCGGCGGTAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGGACGGTGGg ]
[+] EMBL CNS09C9R [ ACACGCACGCGCGTATACACACAAGGCTGGCCGAGAACGCGGAATCAGCAGCATCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7881#0 CCGAATCAGCGGCGGTGAGATTAAATTCATATCTCAATAAATTTCCCGCCGAGAAACATC 60
consensus_7881#1 ---------------------------------------------CCGCCGAGAAACATC 15
***************
consensus_7881#0 GTGCGGTCCCGCAAAACACGCGCTGTGAGCTAGAAGGGGAAAAAAACGTTCTGCTGAAAA 120
consensus_7881#1 GTGCGGTCCCGCAAAACACGCGCTGTGAGCAAGAAG--GAAAAAAACGTTCTGCTGAAAA 73
****************************** ***** **********************
consensus_7881#0 TTGCACTCGTGGTGATAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTTCT 180
consensus_7881#1 TTGCATTCGTGGTGACAGTTCAGCGAAAAGCACAAACAACGTGCGGAGATGTGGAGTGCT 133
***** ********* ***************************************** **
consensus_7881#0 GTGATACAAAGCGCAAAAAAACACGTGCCGTAAATGCAACCTCTTGCATCCGAAGAAACC 240
consensus_7881#1 GTGATACAAAGTGCAAAAAAACACGTGCCGTAAATGCAACCTTTTGCATCCGAAGAAACC 193
*********** ****************************** *****************
consensus_7881#0 TGCCCGGAACAACTTTCATCTTCTGCGCCCGGGTCCAAGTGACCACAGGCAGTCGGAGAA 300
consensus_7881#1 TGCCCGGAACAACTTTCATCTTGTGCGCCCGGGTCCAAGTGACCACACGCAGTCGGAGAA 253
********************** ************************ ************
consensus_7881#0 GACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGC 360
consensus_7881#1 GACCGCGTACGCGAGCCTATGCTGCTGGGTGAATCGATTTTAATTCAATTAAGACAAAGC 313
************************************************************
consensus_7881#0 AAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAA 420
consensus_7881#1 AAGCGCCGACCTGCTACAGTGAGCCCCCGAATCCATTCGTTCGCAGTGCTGCGTTCTTAA 373
************************************************************
consensus_7881#0 TCGTTTGCTAGCAGTGGTAGTGTACAGTTCACAGC------------------CGGCTGG 462
consensus_7881#1 TCGTTTGCTAGCCGTGGTAGTGTACAGTTCACAGCACCACAGCGCGGTAGTGCCGGCTGT 433
************ ********************** ******
consensus_7881#0 TGTCGGAAGTTATTTGCCCGCTACAGAAGGAAACACAAATATATCAGCTTCCGGTGAGAA 522
consensus_7881#1 TGTCGGAAGTTATTTGCCCGCTACCGAAGGGAACACAAATATATCAGCTTCCGGTGAGAA 493
************************ ***** *****************************
consensus_7881#0 ACAGACACACACACACGCGTATACACGCAAGGCTGACCGAGAACGCGGAACCAACAGCAG 582
consensus_7881#1 ACA----CACACACGCGCGTATACACGCAAGGCTGGCCGAGAACGCGGAATCAACAGCAG 549
*** ******* ******************** ************** *********
consensus_7881#0 TAGCAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAA 642
consensus_7881#1 ---CAGCAGCAGCAGAATCCTTCCCGGACGACGGTGTTATTGTGCTGAGGAGCCGCCGAA 606
*********************************************************
consensus_7881#0 ACATGAAGAAGCGCGGCGGCAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGG 702
consensus_7881#1 ACATGAAGAAGCGCGGCGGTAGTCCACAGCCCGCTCCGCCGCCCCGGCCGGCCACGGCGG 666
******************* ****************************************
consensus_7881#0 ACGGTGGCATTGGCAGTGAATCGCTGCTGCACGCCTCGCAGCAC 746
consensus_7881#1 ACGGTGGCATTG-------------------------------- 678
************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||