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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7912#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1332 fasta sequence
[GCGCGTTACATATATATGTATAGATTGCAGGGATCTGCTGTGTCAGGATAGCTTAACCCGGATCCCGCGTGTTTTGCTATTCGACTTAGATACGTAGCTAGGTCTAGTTGTTCGTTTACGCCATCATTTACCATTGTTCCACTCCAAACGTTGTAATTTTCGTTTCCATTTTCCATTTGGTAGGTCATCTGCTCGATTAATTACAGGTCGAATCATATGGTGAGATGGTATAAGAGGTGAGCGTGTGCGTGTTTATGTAGGGTTTTGTGTCGTCTAATGAAGCAGATAGGAGAAAGACACACGTAAAGGAGTAAACACGAATAGTAGGGAATTAGGAAAGTCACCCTGTGCGCACAACAACTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTTTTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACA-CAAGCCGTATAGTTGTCGATATTTAGATGCCGTAGGTAAATGTTTTCTGTTAGTTGATCGACAGTCGATAAGCGCATACACAACACAACCCAACAGGGAATGGGTTCTTAACGGTGGTTATACAAACGCTTAAATCTCTCTTTACACACGCTGCGTGGCGTGTG-TGCGCTACACGTTTTTCCCCCCGCTCCGTATCCGCTACCTTTGCATCTGTGAACGACCAGGCTGCTCCATTGCTTTCACCCAATCCACCATTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGCCATGAGAGCCATGCGTGTGTGCGTGTTTCTGTGTATTATGCAATAAAAATGTAGAAGAAAACAAAGATAAATATACAGCACACAAGACGGTGTGTG]
[+] EMBL CNS095SZ [GCGCGTTACATATATATGTATAGATTGCAGGGATCTGCTGTGTCAGGATAGCTTAACCCGGATCCCGCGTGTTTTGCTATTCGACTTAGATACGTAGCTAGGTCTAGTTGTTCGTTTACGCCATCATTTACCATTGTTCCACTCCAAACGTTGTAATTTTCGTTTCCATTTTCCATTTGGTAGGTCATCTGCTCGATTAATTACAGGTCGAATCATATGGTGAGATGGTATAAGAGGTGAGCGTGTGCGTGTTTATGTAGGGTTTTGTGTCGTCTAATGAAGCAGATAGGAGAAAGACACACGTAAAGGAGTAAACACGAATAGTAGGGAATTAGGAAAGTCACCCTGTGCGCACAACAACTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTTTTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAA ]
[+] EMBL CNS099OH [ TATATGTATAGATTGCAGGGATCTGCTGTGTCAGGATAGCTTAACCCGGATCCCG GTGTTTTGCTATTCGACTTAGATACGTAGCTAGGTCTAGTTGTTCGTTTACGCCATCATTTACCATTGTTCCACTCCAAACGTTGTAATTTTCGTTTCCATTTTCCATTTGGTAGGTCATCTGCTCGATTAATTACAGGTCGAATCATATGGTGAGATGGTATAAGAGGTGAGCGTGTGCGTGTTTATGTAGGGTTTTGTGTCGTCTAATGAAGCAGATAGGAGAAAGACACACGTAAAGGAGTAAACACGAATAGTAGGGAATTAGGAAAGTCACCCTGTGCGCACAACAACTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTTTTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACA CAAGCCGTATAGTTGTCGATATTTAGATGCCGTAGGTAAATGTTTTCTGTTAGTT ]
[+] EMBL CNS09MB8 [ AGGTCTAGTTGTTCGTTTACGCCATCATTTACCATTGTTCCACTCCAAACGTTGTAATTTTCGTTTCCATTTTCCATTTGGTAGGTCATCTGCTCGATTAATTACAGGTCGAATCATATGGTGAGATGGTATAAGAGGTGAGCGTGTGCGTGTTTATGTAGGGTTTTGTGTCGTCTAATGAAGCAGATAGGAGAAAGACACACGTAAAGGAGTAAACACGAATAGTAGGGAATTAGGAAAGTCACCCTGTGCGCACAACAACTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTTTTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACA CAAGCCGTATAGTTGTCGATATTTAGATGCCGTAGTAAAATGTTTTCTGTTAGTTGATCGACAGTCGATAAGCGCATACACAACACAACCCAACAGGGAATGGGTTCTTAACGGTGGTTATACAAACGCTTAAATCTCTCTTCACACACGCTGCGTGGCGTGTGCTGCGCTACACGTTTTccg ]
[-] EMBL CNS09MB9 [ GGAAAGTCACCCTGTGCGCACAACAACTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTTTTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACACCAAGCCGTATAGTTGTCGATATTTAGATGCCGTAGGTAAATGTTTTCTGTTAGTTGATCGACAGTCGATAAGCGCATACACAACACAACCCAACAGGGAATGGGTTCTTAACGGTGGTTATACAAACGCTTAAATCTCTCTTAACACACGCTGCGTGGCGTGTG TGCGCTACACGTTTTTCCCCCCGCTCCGTATCCGCTACCTTTGCATCTGTGAACGACCAGGCTGCTCCATTGCTTTCACCCAATCCACCATTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAA ]
[+] EMBL BX628938 [ AGCAGTATTTATTGGACCCCAACGATGAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTCCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATAGTGGAAATGGTGGTCATTTAAAGAAAAATTCGTGTAGCAAAACAGAGAGAGAGAGATAATTAGAGGGAGTANAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGA ]
[-] EMBL CNS099OI [ CCCCAACGATCAGATGGAATTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCCTATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTAAAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGACAACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCACAGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTATTAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAAGCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACACCAAGCCGTATAGTTGTCGATATTTAGATGCCGTAGGTAAATGTTTTCTGTTAGTTGATCGACAGTCGATAAGCGCATACACAACACAACCCAACAGGGAATGGGTTCTTAACGGTGGTTATACAAACGCTTAAATCTCTCTTTACACACGCTGCGTGGCGTGTG TGCGCTACACG TTTTCCCTCCGCTCCGTATCCGCTACCTTTGCATCTGTGAACGACCAGGCTGCTCCATTGCTTTAACCCAATCCACCATTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGCCATGAGAGCCATGCGTGTGTGCGTGTTTCTGTGTATTATGCAATAAAAATGTAGAAGAAAACAAAGATAAATATACAGCACACAAGAC ]
[-] EMBL CNS095T0 [ ACGGTGGTTATACAAACGCTTAAATCTCTCTTTACACACGCTGCGTGGCGTGTG TGCGCTACACGTTTTTCCCCCCGCTCCGTATCCGCTACCTTTGCATCTGTGAACGACCAGGCTGCTCCATTGCTTTCACCCAATCCACCATTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTATATCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGCCATGAGAGCCATGCGTGTGTGCGTGTTTCTGTGTATTATGCAATAAAAATGTAGAAGAAAACAAAGATAAATATACAGCACACAAGACGGTGTGTG]
consensusID : consensus_7912#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 230 fasta sequence
[CCGCGGACGCGTGGGAATCCACCTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGTCACGAGAGCCATGCGTGTGTGCGTGTTTCTGTGTATTATGCAATAAAACTGTAGATGAAAACAAAGATAAATATACAGCACACAAGACGGTGTGTGGGGTTTGTGTCGC]
[+] EMBL BM632838 [CCGCGGACGCGTGGGAATCCACCTTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCTCGCTGTCTCTGTCACTTCCCCAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGTCACGAGAGCCATGCGTGTGTGCGTGTTTCTGTGTATTATGCAATAAAACTGTAGATGAAAACAAAGATAAATATACAGCACACAAGACGGTGTGTGGGGTTTGTGTCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7912#0 GCGCGTTACATATATATGTATAGATTGCAGGGATCTGCTGTGTCAGGATAGCTTAACCCG 60
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 GATCCCGCGTGTTTTGCTATTCGACTTAGATACGTAGCTAGGTCTAGTTGTTCGTTTACG 120
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 CCATCATTTACCATTGTTCCACTCCAAACGTTGTAATTTTCGTTTCCATTTTCCATTTGG 180
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TAGGTCATCTGCTCGATTAATTACAGGTCGAATCATATGGTGAGATGGTATAAGAGGTGA 240
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 GCGTGTGCGTGTTTATGTAGGGTTTTGTGTCGTCTAATGAAGCAGATAGGAGAAAGACAC 300
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 ACGTAAAGGAGTAAACACGAATAGTAGGGAATTAGGAAAGTCACCCTGTGCGCACAACAA 360
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 CTACCACACAGAGATTAGATAGGAATATGTTCTGCTATTTTACCTGTCCCTATATAGGTT 420
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TTTTTTGTATTGTTTTGTTTGTAGCAGCAGTATTTATTGGACCCCAACGATCAGATGGAA 480
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TTTAGCAATCCATGCAAGCCATATTAATTAGTAGCGAAAACAAACACTTTCTACTCTTCC 540
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TATCGAGCTGTACCTAAACTCCGGTTGCAGTTGCGAAATGGTAGAAATGGTGGTCATTTA 600
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 AAGAAAAAATCGTGTAGCAAAACAGAGAAAGAGAGATAATTAGAGGGAGTAGAGAGGGAC 660
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 AACACTAACCATCAGCTTGCCTCGTTGACCGAAGCAACTGGTGGGGTTGTGATGCCGCAC 720
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 AGAAACGTAAGTAAAAGGAAATCAATTTTAGGATCGATGTTTGGCTCTAGGGGTCACTAT 780
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TAGGATGTGTAAGTTTCGCACACACATAAACACACAGATTAAAATAAACACTTTAAAAAA 840
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 GCGAGTCCTTTCCCCTCCCCCTTAAAATGACAGTGTGGTGGTACACAAGCCGTATAGTTG 900
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 TCGATATTTAGATGCCGTAGGTAAATGTTTTCTGTTAGTTGATCGACAGTCGATAAGCGC 960
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 ATACACAACACAACCCAACAGGGAATGGGTTCTTAACGGTGGTTATACAAACGCTTAAAT 1020
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 CTCTCTTTACACACGCTGCGTGGCGTGTGTGCGCTACACGTTTTTCCCCCCGCTCCGTAT 1080
consensus_7912#1 ------------------------------------------------------------
consensus_7912#0 CCGCTACCTTTGCATCTGTGAACGACCAGGCTGCTCCATTGCTTTCACCCAATCCACCAT 1140
consensus_7912#1 -----------------------------------CCGCGGACGCGTGGGAATCCACC-- 23
** * ********
consensus_7912#0 TTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTC--GCTGTCTCTGTCACTTCCC 1198
consensus_7912#1 TTTTTTTGTTTAGTTTGTTTCGAATGTTTTCTCTCTCTCTCGCTGTCTCTGTCACTTCCC 83
*************************************** *******************
consensus_7912#0 CAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGCCATGAGAGCCATGCGTGTGTGC 1258
consensus_7912#1 CAGCGCTACCGTTGAGACCTGAAACAGGGGGTTTAAGTCACGAGAGCCATGCGTGTGTGC 143
************************************* ** *******************
consensus_7912#0 GTGTTTCTGTGTATTATGCAATAAAAATGTAGAAGAAAACAAAGATAAATATACAGCACA 1318
consensus_7912#1 GTGTTTCTGTGTATTATGCAATAAAACTGTAGATGAAAACAAAGATAAATATACAGCACA 203
************************** ****** **************************
consensus_7912#0 CAAGACGGTGTGTG------------- 1332
consensus_7912#1 CAAGACGGTGTGTGGGGTTTGTGTCGC 230
**************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||