cluster # 7930

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Anopheles gambiae
cluster # 7930 cluster # 7930 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7930#0 length = 733 sequences # 7

consensus_7930#1 length = 453 sequences # 1

consensusID : consensus_7930#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 733
fasta sequence

                              [CCGCCCACGACGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCGACA-GTGTACGGTTCAAGTAACA-GGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCGTCTCGACCGTGGCCCGCCATGTGGG]

[+] EMBL BM648724             [CCGCCCACGACGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCGACATGTGTACGGTTCAAGTAACATAGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM585838             [                                     CCGGTGCGACA GTGTACGGTTCAAGTAACA GGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCGTCT                      ]
[+] EMBL BM607738             [                                       ccgGCGACA GTGTACGGTTCAAGTAACA GGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACTAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCG                         ]
[+] EMBL BX602569             [                                                 GTGTACGGTTCAAGTAACA GGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCGTCTCGACCGTGGCCCGCCATGTGGG]
[+] EMBL BM627364             [                                                   ccgCGGTTCAAGTAACA GGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGAC                                                                     ]
[+] EMBL BX605089             [                                                                        AGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCC  ATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGC                                                                                 ]
[+] EMBL BX606103             [                                                                                                     TTAATACGACACCACACACACACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAAGTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAGCGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACCTTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGAC                                          ]




>consensus_7930#0
CCGCCCACGACGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCGACAGTGTACGGTTCA
AGTAACAGGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACAC
ACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTGGCGTGTTTGAAA
GTTGTTCAGCGGTGGCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTAGCGAAG
CGAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGAAAAGTGA
TTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTTAGCTACC
TTCAAAACGGCAAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACCACCAACAGC
ACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGGACACGCTGC
CGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCCGCACCGAGC
ACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAGAGCGCACCG
AGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGGCCGAGCAGC
TGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCGTCTCGACCGTGG
CCCGCCATGTGGG

consensusID : consensus_7930#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence

                              [CCGCCCACGCGTCCGGTACAACGTGCGCTCGATGCCGATCCGCAAGGACGACGAGGTGCAGGTGGTGCGCGGCCACTACAAGGGCAACCAGGTCGGCAAGGTGGTGCAGGTGTACCGCAAGAAGTACGTCGTGTACATTGAGCGCATCCAGCGCGAGAAGGCGAACGGCACGAACGTGTACGTCGGTGTGCACCCGTCCAAGTGTGTGATCGTGAAGCTGAAGATGGACAAGGATCGCAAGAAGATCCTGGATCGCCGCGCCAAGGGTCGTCTGGCGGCGCTCAACAAGGACAAGGGCAAGTACACCGAGGAATCTGCTGCCGCCACCGCGATGGAAACGACCTCTTAAGTGTACACAATACAAAACATTCGCTGGTGTGGGGCAGGAGGAACGTGTGTTGTGCGGCCGTGAACGGCAGGCGAATAAAATAAGGATGAGATGGAGAGAAAGTT]

[+] EMBL BM603650             [CCGCCCACGCGTCCGGTACAACGTGCGCTCGATGCCGATCCGCAAGGACGACGAGGTGCAGGTGGTGCGCGGCCACTACAAGGGCAACCAGGTCGGCAAGGTGGTGCAGGTGTACCGCAAGAAGTACGTCGTGTACATTGAGCGCATCCAGCGCGAGAAGGCGAACGGCACGAACGTGTACGTCGGTGTGCACCCGTCCAAGTGTGTGATCGTGAAGCTGAAGATGGACAAGGATCGCAAGAAGATCCTGGATCGCCGCGCCAAGGGTCGTCTGGCGGCGCTCAACAAGGACAAGGGCAAGTACACCGAGGAATCTGCTGCCGCCACCGCGATGGAAACGACCTCTTAAGTGTACACAATACAAAACATTCGCTGGTGTGGGGCAGGAGGAACGTGTGTTGTGCGGCCGTGAACGGCAGGCGAATAAAATAAGGATGAGATGGAGAGAAAGTT]




>consensus_7930#1
CCGCCCACGCGTCCGGTACAACGTGCGCTCGATGCCGATCCGCAAGGACGACGAGGTGCA
GGTGGTGCGCGGCCACTACAAGGGCAACCAGGTCGGCAAGGTGGTGCAGGTGTACCGCAA
GAAGTACGTCGTGTACATTGAGCGCATCCAGCGCGAGAAGGCGAACGGCACGAACGTGTA
CGTCGGTGTGCACCCGTCCAAGTGTGTGATCGTGAAGCTGAAGATGGACAAGGATCGCAA
GAAGATCCTGGATCGCCGCGCCAAGGGTCGTCTGGCGGCGCTCAACAAGGACAAGGGCAA
GTACACCGAGGAATCTGCTGCCGCCACCGCGATGGAAACGACCTCTTAAGTGTACACAAT
ACAAAACATTCGCTGGTGTGGGGCAGGAGGAACGTGTGTTGTGCGGCCGTGAACGGCAGG
CGAATAAAATAAGGATGAGATGGAGAGAAAGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7930#0      CCGCCCACGACGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCGACA-GTGTACGGTTC 59
consensus_7930#1      -------------------------CCGCCCACGCGTCCGGTACAACGTGCGCTCGATGC 35
                                               ***************** * **  * *  ** * *

consensus_7930#0      AAGTAACAGGAAGCACGCGAACACATCACAACACCCCCGGTTAATACGACACCACACACA 119
consensus_7930#1      CGAT--CCGCAAGGACGACGAGGTG-CAGGTGGTGCGCGGCCACTACAAGGGCAACCAGG 92
                         *  * * *** ***   *     **       * ***  * *** *   **  **  

consensus_7930#0      CACTCACTACCCGTCTTCGTACTGTGGCGGAAGTCCTTTTCGGTTTTTG-GCGTGTTTGA 178
consensus_7930#1      TCGGCAAGGTG-GTGCAGGTGTACCGCAAGAAGTACGTCGTGTACATTGAGCGCATCCAG 151
                          **      **    **     *   ***** * *   *    *** ***  *    

consensus_7930#0      ---AAGTTGTTCAGCGGTG-GCACGTGCGCGTCGGTGCTTTTCAAGGGTGCTGCGAATTA 234
consensus_7930#1      CGCGAGAAGGCGAACGGCACGAACGTGTACGTCGGTGTGCACCCGTCCAAGTGTGTGATC 211
                          **  *   * ***   * *****  ********     *        ** *   * 

consensus_7930#0      GCGAAGC-GAAGTTCGAGCTCAAATTCTTCAAAAACATCACGGACGCTATTACACGGGGA 293
consensus_7930#1      GTGAAGCTGAAGATGGA---CAAGGATCGCAAGAAGATCCTGGA-----TCGCCGCGCCA 263
                      * ***** **** * **   ***      *** ** ***  ***     *  *   *  *

consensus_7930#0      AAAGTGATTTAATTTGCCGCTAAGTGCCACATAAACTCGGTTGGAAAGATGAGCAAATTT 353
consensus_7930#1      AGGGTCGTCTGGC--GGCGCT-----CAACAAGGACAAGGGCAAGTACACCGAGGAATCT 316
                      *  **  * *     * ****     * ***   **  **      * *      *** *

consensus_7930#0      AGCTACCTTCAAAACGGC--AAAGCATCGACGAACGGTGTGCCACACGCGAACGGTCACC 411
consensus_7930#1      -GCTGCCGCCACCGCGATGGAAACGACCTCTTAAGTGTACACAATACA-AAACATTCGCT 374
                       *** **  **   **    ***  * *    **  **   * * **   ***  ** * 

consensus_7930#0      ACCAACAGCACCAAAACGGGCATTCGAATGGGGTGGCCCGGAATGGTGGTACTGCCACGG 471
consensus_7930#1      GGTGTGGGG--CAGGAGGAACGT--GTGTTGTGCGGCCGTGAACGGCAG-------GCGA 423
                             *   **  * *  * *  *  * * * ****  *** **  *        ** 

consensus_7930#0      ACACGCTGCCGGTAGCTTACCAGCAGAAGGCGGCCACGAGCGGCCCGTTCCATATGCCCC 531
consensus_7930#1      ATAAAATAAGGATGA--GATGGAGAGAAAGTT---------------------------- 453
                      * *   *   * *     *     **** *                              

consensus_7930#0      GCACCGAGCACGTTGGGTACACGTACGACACGCTGCAGGAAATTGCCACCTATCTCCTAG 591
consensus_7930#1      ------------------------------------------------------------
                                                                                  

consensus_7930#0      AGCGCACCGAGCTACGCCCGAAGGTTGGCATCATCTGCGGGTCCGGCCTGGGCACGCTGG 651
consensus_7930#1      ------------------------------------------------------------
                                                                                  

consensus_7930#0      CCGAGCAGCTGACCGATGTGGACAGCTTCGACTACGAGACAATCCCACACTTCCCCGTCT 711
consensus_7930#1      ------------------------------------------------------------
                                                                                  

consensus_7930#0      CGACCGTGGCCCGCCATGTGGG 733
consensus_7930#1      ----------------------