cluster # 7932

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Anopheles gambiae
cluster # 7932 cluster # 7932 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7932#0 length = 905 sequences # 6

consensus_7932#1 length = 402 sequences # 2

consensusID : consensus_7932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 905
fasta sequence

                              [ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGTGTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCATCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGCCATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAAGCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGTCGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTGCGCCGGGTTCGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCAGGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGTGATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGCTTGAGCTACGCCAGTCATCCCCGGCAGCGAAGGCCCTTGCATCCGGTGACGCCGCTGCTGGTGAGGGTGGAAAAACGTCGCGCGACTTCCTGGAGTTCATGGCGGCCGGTGCTACGTCCAAGACGATCGCATCGGGTAGTGGCGTACCCGCACGAGGTCGCCCGCACCCGGGCTCCCGGGGAGGAGGGGAACAAGTACCGCAACTTCTGGCAGACGCTGCTGACCCGTCTGGGAAGGAGGAAGGCAAAGCCGGCCTCTACCGCG]

[+] EMBL AGA284175            [ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGTGTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCATCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGCCATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAAGCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGTCGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTGCGCCGGGTTCGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCAGCTGGACAGCAATGCCCGCATGACGGGGGGCGAATGCGTC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AGA284520            [ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGTGTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCATCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGCCATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAAGCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGTCGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCCGGTGCACATACTGAGCGCATCCTGCGCCGGGTTCGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCAGCTGGACAGCAATGCCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AGA281201            [ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGTGTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCATCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGCCATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAAGCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGTCGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGGCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM577797             [                                                                                                                                                                                                                                                                                 ccgCAAGGGTCTCGGCCCGAACATCGTCGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTGCGCCGGGTTTGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCAGGGCGT                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM579327             [                                                                                                                                                                                                                                                                                                                                           ccgGCCTACTCTAAGACAAAGAACTCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM596825             [                                                                                                                                                                                                                                                                                                                                                                 ccgCGCTGAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTGCGCCGGGTTTGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCAGGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGTGATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGCTTGAGCTACGCCAGTCATCCCCGGCAGCGAAGGCCCTTGCATCCGGTGACGCCGCTGCTGGTGAGGGTGGAAAAACGTCGCGCGACTTCCTGGAGTTCATGGCGGCCGGTGCTACGTCCAAGACGATCGCATCGGGTAGTGGCGTACCCGCACGAGGTCGCCCGCACCCGGGCTCCCGGGGAGGAGGGGAACAAGTACCGCAACTTCTGGCAGACGCTGCTGACCCGTCTGGGAAGGAGGAAGGCAAAGCCGGCCTCTACCGCG]




>consensus_7932#0
ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGT
GTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCA
TCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGC
CATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAA
GCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGT
CGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCT
GAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTG
CGCCGGGTTCGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCA
GCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCA
GGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGT
GATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGCTTGAGCTACGCCAGTCATC
CCCGGCAGCGAAGGCCCTTGCATCCGGTGACGCCGCTGCTGGTGAGGGTGGAAAAACGTC
GCGCGACTTCCTGGAGTTCATGGCGGCCGGTGCTACGTCCAAGACGATCGCATCGGGTAG
TGGCGTACCCGCACGAGGTCGCCCGCACCCGGGCTCCCGGGGAGGAGGGGAACAAGTACC
GCAACTTCTGGCAGACGCTGCTGACCCGTCTGGGAAGGAGGAAGGCAAAGCCGGCCTCTA
CCGCG

consensusID : consensus_7932#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 402
fasta sequence

                              [TGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCAGGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGTGATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGTCCGTTCGCATTGTCCGCTCGCGCTCATCCAGTGGCGTCGTCCTCGTCGTCCATCATCGTGTCGTGTCGTGTTGTGTGTGTGTGTTGTTCATGTCATTGTTTGCGTGGTTTTCATGATGATGGTGATGTGTGCATGCTAAGATGCGCGAGAGCGATGTGTAAGATAGAAAACGGATGTGACCGAAACTCCGTACCAGAGATCCTCACAGAGAGCGAGAGATGGTGAAGAAGTATGAGT]

[-] EMBL AGA285471            [TGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCAGGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGTGATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGTCCGTTCGCATTGTCCGCTCGCGCTCATCCAGTGGCGTCGTCCTCGTCGTCCATCATCGTGTCGTGTCGTGTTGTGTGTGTGTGTTGTTCATGTCATTGTTTGCGTGGTTTTCATGATGATGGTGATGTGTGCATGCTAAGATGCGCGAGAGCGATGTGTAAGATAGAAAACGGATGTGACCGAAACTCCGTACCAGAGATCCTCACAGAGAGCGAGAGATGGTGAAGAAGTATGAGT]
[-] EMBL AGA285825            [                                                                                                                                                                                              ATCCAGTGGCGTCGTCCTCGTCGTCCATCATCGTGTCGTGTCGTGTTGTGTGTGTGTGTTGTTCATGTCATTGTTTGCGTGGTTTTCATGATGATGGTGATGTGTGCATGCTAAGATGCGCGAGAGCGATGTGTAAGATAGAAAACGGATGTGACCGAAACTCCGTACCAGAGATCCTCACAGAGAGCGAGAGATGGTGAAGAAGTATGAG ]




>consensus_7932#1
TGCAGCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGT
CGCAGGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGA
CGGTGATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGTCCGTTCGCATTGTCC
GCTCGCGCTCATCCAGTGGCGTCGTCCTCGTCGTCCATCATCGTGTCGTGTCGTGTTGTG
TGTGTGTGTTGTTCATGTCATTGTTTGCGTGGTTTTCATGATGATGGTGATGTGTGCATG
CTAAGATGCGCGAGAGCGATGTGTAAGATAGAAAACGGATGTGACCGAAACTCCGTACCA
GAGATCCTCACAGAGAGCGAGAGATGGTGAAGAAGTATGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7932#0      ACACGCTGCGCTCGCTGCCGATGGCGGGAAACTGACCGACCATCATCACGTACGCCACGT 60
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      GTCCGCCACTGTCAACAGCGCTTCGTCCGCAGCCGATCGGCACCACAGTGCCGCCCGCCA 120
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      TCAGCAGTCACGAGTATGCGCTAGCACGATCCTGACCCGGCGTCGTCCTTCGATCCTGGC 180
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      CATTCCGCAATGTGGCCTGTCGACCTCGGTACAATCGATCAGCATCTGGCAATGCCTGAA 240
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      GCACATCGTCCAAACCGAAGGGTCGCGCGCATTGTTCAAGGGTCTCGGGCCGAACATCGT 300
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      CGGTGTGGCGCCATCGCGGGCGATCTACTTCTGCGCCTACTCTAAGACAAAGAACTCGCT 360
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      GAACACAGTCGGCATCATTCCGGCCAACTCGCCGCTGGTGCACATACTGAGCGCATCCTG 420
consensus_7932#1      ------------------------------------------------------------
                                                                                  

consensus_7932#0      CGCCGGGTTCGTCTCGTCCACCGCCACCAACCCGATATGGTTCATCAAGACGCGCATGCA 480
consensus_7932#1      --------------------------------------------------------TGCA 4
                                                                              ****

consensus_7932#0      GCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCA 540
consensus_7932#1      GCTGGACAGCAATGCCCGCATGACGGTGGGCGAATGCGTCCGGCGCATCTACGAGTCGCA 64
                      ************************************************************

consensus_7932#0      GGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGT 600
consensus_7932#1      GGGCGTCCGCGGCTTCTACAAGGGCATCACGGCCAGCTACGTCGGCATCTCCGAGACGGT 124
                      ************************************************************

consensus_7932#0      GATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGCTTGAGCTACGCCAGTCATC 660
consensus_7932#1      GATCCACTTCGTCATCTACGAGGCTCTGAAGAAGAAACTGTC-------CGTTCGCATTG 177
                      ****************************************         **   *   * 

consensus_7932#0      CCCGGCAGCGAAGGCCCTTGCATCCGGTGACGCCGCTGCTGGTGAGGGTGGAAAAACGTC 720
consensus_7932#1      TCCGCTCGCG--------CTCATCCAGTGGCGTCGTCCTCGTCG----TCCATCATCGTG 225
                       ***   ***          ***** *** ** **     *  *    *  *  * *** 

consensus_7932#0      GCGCGACTTCCTG-GAGTTCATGGCGGCCGGTGCTACGTCCAAGACGATCGCATCG-GGT 778
consensus_7932#1      TCGTGTCGTGTTGTGTGTGTGTGTTGTTCATGTCATTGTTTGCGTGGTTTTCATGATGAT 285
                       ** * * *  ** * **   **  *  *    *   **    *  * *  ***   * *

consensus_7932#0      AGTGGCGTACCCGCACGAGGTCGCCCGCACCCGGGCTCCCGGGGAGGAGGGGAACAAGTA 838
consensus_7932#1      GGTGATGTGTGCATGCTAAGATGCGCGAGAGCGATGTGTAAGATAGAAAACGGATGTG-A 344
                       ***  **   *   * * *  ** **    **   *    *  ** *   * *   * *

consensus_7932#0      CCGCAACTTCTGGCAGACGCTGCTGACCCGTCTGGGAAGGAGGAAGGCAAAGCCGGCCTC 898
consensus_7932#1      CCGAAACTCCGTACCAGAGATCCTCACA-GAGAGCGAGAGATGGTGAAGAAGTATGAGT- 402
                      *** **** *   *    * * ** **  *   * **  ** *  *   ***   *  * 

consensus_7932#0      TACCGCG 905
consensus_7932#1      -------