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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7955#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1164 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGCCCTGATAATGCTGGGAGTAACAATTCTATTGGTCGCGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACTAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAGTTCCAAC-AAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATCGTTTAATAGTGATGTACGTCCAATCTGTCTCCCAATGGGACCCGAATATCAGACGACAGATACAAAATATTTCATTGTTACACGAAAAGAGGATTACGCTTTGTTGGACACAGACGCTGTAGCGATAAGCGAAGTTCATCTAGTTGCAAACGAGTATTGTCAAAGTTGGCTACAGAGGACGGTTCATAATTCTCAGATGTGTGCGATCGAATTGGCTCCAAACGATGATTGTGCAAAACCATACGGTGCATCACTAACAGCTCAGGCCCGCAATGGACGCCACGTCATGTACGGGGCACATGCTTTTGGGATGGACATTTGCACGCAAAATGAATCCACCGTGTACACCAGAGTGGAAAGTTTCGTTGATTGGATACTGAGTAATATCGAAGAGTGATCGTGTGATCGAACGTTCCTCTTGGAACTCTTTTTCAAAAACATACATTGTTTATGGATGATTTGATCGATTCTAAAAATGACNATAAATAGTAGCGAAAGNTTAGT]
[+] EMBL BM576294 [CCGCCCACGCGTCCGCCCACGCGTCCGGATAATGCTGGGAGTAACAATTCTATTGGTCGCGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACT TACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAA ]
[+] EMBL BM636719 [ cCGCTCTGATAATGCTGGGAGTAACAATTCTATTGGTCGCGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACTAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAGTTCCAAC AAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATC ]
[+] EMBL BM651954 [ CCGTGATAATGCTGGGAGTAACAATTCTATTGGTCGCGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACTAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAGTTCCAAC AAGCCATGGCTGTTTAACA ]
[+] EMBL BM644276 [ ccgGCTGGGAGTAACAATTCTATTGGTCGCGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACTAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCC ]
[+] EMBL BM607334 [ ccgGTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTGCATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGCAACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGACTAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCCTGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAGTTCCAACAAAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATCGTTTAATAGTGATGTACGTCCAATCTGTCTCCCAATGGGA ]
[+] EMBL BX623096 [ AATCTGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAGTTCCAAC AAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATCGTTTAATAGTGATGTACGTCCAATCTGTCTCCCAATGGGACCCGAATATCAGACGACAGATACAAAATATTTCATTGTTACACGAAAAGAGGATTACGCTTTGTTGGACACAGACGCTGTAGCGATAAGCGAAGTTCATCTAGTTGCAAACGAGTATTGTCAAAGTTGGCTACAGAGGACGGTTCATAATTCTCAGATGTGTGCGATCGAATTGGCTCCAAACGATGATTGTGCAAAACCATACGGTGCATCACTAACAGCTCAGGCCCGCAATGGACGCCACGTCATGTACGGGGCACATGCTTTTGGGATGGACATTTGCACGCAAAATGAATCCACCGTGTACACCAGAGTGGAAAGTTTCGTTGATTGGATACTGAGTAATATCGAAGAGTGATCGTGTGATCGAACGTTCCTCTTGGAACTCTTTTTCAAAAACATACATTGTTTATGGATGATTTGATCGATTCTAAAAATGACNATAAATAGTAGCGAAAGNTTAGT]
[+] EMBL BX617164 [ TAGAAAATAATGGCACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTCCGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTTCTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCGCGGCGCGTGTACACTGAAACCTCAAGACATCCCCATCGAACGCACCATCGGACACGATAGTTCCAAC AAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATCGTTTAATAGTGATGTACGTCCAATCTGTCTCCCAATGGGACCCGAATATCATACGACAGATAAAAAATATTTCATTGTTACACGAAAAGAGGATTACGCTTTGTTGGACACAGACGCGGTAGCGATAAGCGAAGTTCATCTGGTTGCAAACGAGTATTGTCAAAGTTGGCTACAGAGGACGGTTCATAATTCTCAGATGTGTGCGATCGAATTGGCTCCAAACGATGATTGTGCAAAACCATACGGTGCATCACTCACAGCTCAAGCCCGCAATGGACGCCACGTCATGTACGGGGCACATGCTTTTGG ]
consensusID : consensus_7955#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 640 fasta sequence
[CCGCAGAGGCGAAAGAAGTCAATAGGCTCAAAAACTCTATAAAAATCAATAAAAATAATCGTCCAGAGAATGCTGAGAGTAACAATTCTACTGATCGCGCTGCACGGCGCACATCAAGCTACGGCACATTTGCTTGACCTCGAAGGCTGTGGAATGAACCGGATGCAAAACAACGAAACTTTGGGAAATAATGACAATCTTGGGCAGCTTCCATGGATAGCGTCGATAAAATCGAGTTCTGGGCAACATATCTGTGGCGGCAGTTTGATCAGTAAACGCTACGTGCTGACGGCTGCCCATTGCTTAGGACACAACGATCTTGCATTTGTTCAGCTACGAAAGAAGGATTGTGATGAGAGCGGCGTGTGCACACTAGCAAAAGAAGACATCCCCATCGAACGCACCATCGGACACGATAGTTACAACAAACCAGTGCAGTCGCACGACATCGCCCTGGTGCGTTTGACACGAGACGCATCGTTTAATAGCGATGTACGCCCAATTTGTCTCCCAATGGGACCCGAATACCAGACGACGGCATCTAAGTACTTCGTAGCTCCACGAGGACAGGACTACGCTTCGTTGAACACTGACACGATTGACATTACTGAGGTTGATCTGGTCACAGCTGATCAGTGTC]
[+] EMBL BM635037 [CCGCAGAGGCGAAAGAAGTCAATAGGCTCAAAAACTCTATAAAAATCAATAAAAATAATCGTCCAGAGAATGCTGAGAGTAACAATTCTACTGATCGCGCTGCACGGCGCACATCAAGCTACGGCACATTTGCTTGACCTCGAAGGCTGTGGAATGAACCGGATGCAAAACAACGAAACTTTGGGAAATAATGACAATCTTGGGCAGCTTCCATGGATAGCGTCGATAAAATCGAGTTCTGGGCAACATATCTGTGGCGGCAGTTTGATCAGTAAACGCTACGTGCTGACGGCTGCCCATTGCTTAGGACACAACGATCTTGCATTTGTTCAGCTACGAAAGAAGGATTGTGATGAGAGCGGCGTGTGCACACTAGCAAAAGAAGACATCCCCATCGAACGCACCATCGGACACGATAGTTACAACAAACCAGTGCAGTCGCACGACATCGCCCTGGTGCGTTTGACACGAGACGCATCGTTTAATAGCGATGTACGCCCAATTTGTCTCCCAATGGGACCCGAATACCAGACGACGGCATCTAAGTACTTCGTAGCTCCACGAGGACAGGACTACGCTTCGTTGAACACTGACACGATTGACATTACTGAGGTTGATCTGGTCACAGCTGATCAGTGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7955#0 CCGCCCACGCGTCCGCCCACGCGCCCTGATAATGCTGGGAGTAACAATTCTATTGGTCGC 60
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 GTTGCACGGCGCACATCAAGCTACGGCACAGTTGAATACATGTACCGGTGGCAAGATCTG 120
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 CATCCCGATCGAGCAATGCCCACTGTTTGGGTCTAACTCAAGGGCCACGTGGACAGAGGC 180
consensus_7955#1 --------------------------------------------------CCGCAGAGGC 10
*******
consensus_7955#0 AACAATGAATCAGTTTAGAGCGCGTGTCTGTGAGAGGGAACCCACTATCGATGGGTGGAC 240
consensus_7955#1 GA-AAGAAGTCAATAGGCTCAAAAACTCTATAA-----AAATCAATAAAAATAATCGTCC 64
* ** * *** * *** * * ** ** ** ** * *
consensus_7955#0 TAAGTACAAGGTATGTTGCGAACCACCGGCTCCCAGCGAACCAAGGGACGGTCGTAAGCC 300
consensus_7955#1 AGAGAATGCTGAGAGTAACAATTCTACTGATCGCGCTGCAC-----GGCGCACATCAAGC 119
** * * ** * * * * * ** * * ** * ** * * * *
consensus_7955#0 TGGCTTAGATTTGCTTGACCTCAAAGGCTGTGGGATGAACCGAATGCACAGCAACGAATC 360
consensus_7955#1 TACGGCACATTTGCTTGACCTCGAAGGCTGTGGAATGAACCGGATGCAAAACAACGAAAC 179
* * ************** ********** ******** ***** * ******* *
consensus_7955#0 TGTAGAAAATAATGGTACTCTTGGGAAGCTTCCATGGATAGCATTACTAAAAACAAGTTC 420
consensus_7955#1 TTTGGGAAATAATGACAATCTTGGGCAGCTTCCATGGATAGCGTCGATAAAATCGAGTTC 239
* * * ******** * ******* **************** * ***** * *****
consensus_7955#0 CGGGGAGTATCACTGTGCCGGAACCTTAATCAGTAAACGCTACGTGCTGACGACTGCGTT 480
consensus_7955#1 TGGGCAACATATCTGTGGCGGCAGTTTGATCAGTAAACGCTACGTGCTGACGGCTGCCCA 299
*** * ** ***** *** * ** ************************ ****
consensus_7955#0 CTGCATAATAAGCAAGAACCTTGCATTTGTGCAGCTTCGAAAGAAGGATTGTGATGAGCG 540
consensus_7955#1 TTGCTTAGGACACAACGATCTTGCATTTGTTCAGCTACGAAAGAAGGATTGTGATGAGAG 359
*** ** * *** * *********** ***** ********************* *
consensus_7955#0 CGGCGCGTGTACACTGAAACCTCAAGACATTCCCATCGAACGCACCATCGGACACGATAG 600
consensus_7955#1 CGGCGTGTGCACACTAGCAAAAGAAGACATCCCCATCGAACGCACCATCGGACACGATAG 419
***** *** ***** * ******* *****************************
consensus_7955#0 TTCCAACAAGCCATGGCTGTTTAACAACATCGGCCTGGTACGTTTGGCACGAGACGCATC 660
consensus_7955#1 TTACAACAAACCAGTGCAGTCGCACGACATCGCCCTGGTGCGTTTGACACGAGACGCATC 479
** ****** *** ** ** ** ****** ****** ****** *************
consensus_7955#0 GTTTAATAGTGATGTACGTCCAATCTGTCTCCCAATGGGACCCGAATATCAGACGACAGA 720
consensus_7955#1 GTTTAATAGCGATGTACGCCCAATTTGTCTCCCAATGGGACCCGAATACCAGACGACGGC 539
********* ******** ***** *********************** ******** *
consensus_7955#0 TACAAAATATTTCATTGTTACACGAAAAGAGGATTACGCTTTGTTGGACACAGACGCTGT 780
consensus_7955#1 ATCTAAGTACTTCGTAGCTCCACGAGGACAGGACTACGCTTCGTTGAACACTGACACGAT 599
* ** ** *** * * * ***** * **** ******* **** **** *** * *
consensus_7955#0 AGCGATAAGCGAAGTTCATCTAGTTGCAAACGAGTATTGTCAAAGTTGGCTACAGAGGAC 840
consensus_7955#1 TGACATTACTGAGGTTGATCTGGTCACAGCTGATCAGTGTC------------------- 640
* ** * ** *** **** ** ** ** * ****
consensus_7955#0 GGTTCATAATTCTCAGATGTGTGCGATCGAATTGGCTCCAAACGATGATTGTGCAAAACC 900
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 ATACGGTGCATCACTAACAGCTCAGGCCCGCAATGGACGCCACGTCATGTACGGGGCACA 960
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 TGCTTTTGGGATGGACATTTGCACGCAAAATGAATCCACCGTGTACACCAGAGTGGAAAG 1020
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 TTTCGTTGATTGGATACTGAGTAATATCGAAGAGTGATCGTGTGATCGAACGTTCCTCTT 1080
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 GGAACTCTTTTTCAAAAACATACATTGTTTATGGATGATTTGATCGATTCTAAAAATGAC 1140
consensus_7955#1 ------------------------------------------------------------
consensus_7955#0 NATAAATAGTAGCGAAAGNTTAGT 1164
consensus_7955#1 ------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||