cluster # 7959

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Anopheles gambiae
cluster # 7959 cluster # 7959 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7959#0 length = 1947 sequences # 6

consensus_7959#1 length = 1275 sequences # 1
consensus_7959#2 length = 939 sequences # 1

consensusID : consensus_7959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1947
fasta sequence

                              [CCGCCCACGCGTCCGCAGCTCTTAGTGTACGGTCGTGCTCGTTCGCTCGTCTCCGTGAGTCGTTCCCTCGAGTGTGATTACGACGTCGTGCGTGTACGTTTGTGTGCAATTTATACAGCATTGGCCATTGTTTTCCGTTTCACTTCCCAATCTCCTGAACGCGGGCGTGCAGTTGTTTGTGGTTTGACTTTTCGAGAAAATCCACACCGCGGGCTAATAATTATCAACTTTCGCGGTTTTATTAGTTCACGAATTTCGTGTGTGTGTGTGTGTGTGTGTGAGTGGGGGGTGTGTGGTCAACTGGGGCGATAAATAATTCCACGAACTACCGCGTTTGTGCGTTGGCCAATAACAAAAAAAAAGTTCGCAGAAGCTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCAGTTGAAACACGTGCGTCACGGTGTGTTTCGGACGCAGTCGGAGCGCAGCACGCCGCAGGCATAACAACACGGGCACTATAAATCTCCAACACTCAGCTCACGCATACGCGCCCTCAGGATGAGTCTCGAACAGGTGCCGACGGTGACGACGCTGCTGCGGGCATCGCGCGACGCTAACGAGTATCTGCTGAAGGAAGTGTTCCGAGACATACTGGAGAATGGTATCTCAAAGGAGAATCTCAACTCAACGGATCGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACGAGGGCAACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTTTCGGACGTGGTCAACATGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACAACCTCGGCTTCACGCCGCTGATGAAGGCCGCCCTCCAGGGCAGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGTTGGACAAATCGACACCATGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATGCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTGGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAACTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCGGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTATGAAGCATCGCTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCNGGATGGAACGCCATCACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCCGCGTGTCAAACTGTACAGAAGAGATAAAAAAATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATCCAACGGGGATGGTAGTTTGTATCGATCCTTAAGGTAAAAGATACAATGATTCGAATGTGAAGTAAATGTAACACCCGCTAGCATTTAAGTGATCTGTCCACAGGTGCGAGGATCATTAGTGTATGAATGGAAAGTTAGAAGTCATCTAAAAATACATAGCGATATGTTATAAGTACGATGTAAAATACAAGCTGTAAGGGGGGGGGAAATACCCTT]

[+] EMBL BM580721             [CCGCCCACGCGTCCGCAGCTCTTAGTGTACGGTCGTGCTCGTTCGCTCGTCTCCGTGAGTCGTTCCCTCGAGTGTGATTACGACGTCGTGCGTGTACGTTTGTGTGCAATTTATACAGCATTGGCCATTGTTTTCCGTTTCACTTCCCAATCTCCTGAACGCGGGCGTGCAGTTGTTTGTGGTTTGACTTTTCGAGAAAATCCACACCGCGGGCTAATAATTATCAACTTTCGCGGTTTTATTAGTTCACGAATTTCGTGTGTGTGTGTGTGTGTGTGTGAGTGGGGGGTGTGTGGTCAACTGGGGCGATAAATAATTCCACGAACTACCGCGTTTGTGCGTTGGCCAATAACAAAAAAAAAGTTCGCAGAAGCTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCAGTTGAAACACGTGCGTCACGGTGTGTTTCGGACGCAGTCGGAGCGCAGCACGCCGCAGGCATAACAACACGGGCACTATAAATCTCCAACACTCAGCTCACGCATACGCGCCCTCAGGATGAGTCTCGAACAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM652350             [               ccGCTCGTAGTGTACGGTCGTGCTCGTTCGCTCGTCTCCGTGAGTCTTTCCCTCGAGTGTGATTACGACGTCGTGCGTGTACGTTTGTGTGCAATTTATACAGCATTGGCTATTGTTTTCCGTTTCACTTCCCAGTCTCCTGAACGCGGGCGTGCAGTTGTTTGTGGTTTGACTTTTCGAGAAAATCCACCACGCTGGCTAATAATAATCAACTACCGTGGTTTTATTAGTTCGCGAATTTCGTGCCTGTGTGTGTGTGTGTGT      GGGGTGTGTGGTCAACTGGGGCGATAAATAATTCCACGAACTACCGCGTTTGTGCGTTGGCCAATAACAAAAAAAAAGTTCGCAGAAGCTCTAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCGGCGCAGCTGAAACACGTGCGTCACGGTGTGTGCCGGACGCAGTCGGAGCGCAGCACGCCGCGGGCATAACAGCACGGGCACTATAAATCTCCAACACTCAGCTCGCGAATACGCGCCCTCAGGATGAGTCTCGAACAGGTGCCGACGGTGACGACGCTGCTGCGGGCATCGCGCGACGCTAACGAGTATCTGCTGAAGGAAGTGTTCCGAGACATACTGGAGAATGGTATCTCAAAGGAGAATCTCAACTCAACGGATCGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM631969             [                                                                                                                                                                                                                                                                                                                                      ccgCGCGTTTGTGCGTTGGCCAATAACAAAAAAAAAGTTCGCAGAAGCTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCAGTTGAAACACGTGCGTCACGGTGTGTTTCGGACGCAGTCGGAGCGCAGCACGCCGCAGGCATAACAACACGGGCACTATAAATCTCCAACACTCAGCTCACGCATACGCGCCCTCAGGATGAGTCTCGAACAGGTGCCGACGGTGACGACGCTGCTGCGGGCATCGCGCGACGCTAACGAGTATCTGCTGAAGGAAGTGTTCCGAGACATACTGGAGAATGGTATCTCAAAGGAGAATCTCAACTCAACGGATCGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACGAGGGCAACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTCTCGGACGTGGTCAACATGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACAACCTCGGCTTCACGCCGCTGATGAAAGCCGCCCTTCAGGGCAGGACGCGTTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX621890             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACGAGGGCAACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTTTCGGACGTGGTCAACATGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACAACCTCGGCTTCACGCCGCTGATGAAGGCCGCCCTCCAGGGCAGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGTTGGACAAATCGACACCATGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATGCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTGGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAACTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCGGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGNTGGAAGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX622156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTTTCGGACGTGGTCAACATGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACAACCTCGGCTTCACGCCGCTGATGAAGGCCGCCCTCCAGGGCAGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGTTGGACAAATCGACACCATGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATGCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTGGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAACTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCGGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTATGAAGCATCGCTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCNGGATGGAACGCCATCACACTCGCCGGTACCGG                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08VRP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGCCAACGCAAAATGG TTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTCGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAATTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCCGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTTTGAAGCATGACTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCACCACCAACAGCCGGAATGGAACGCCATAACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCCGCGTGTCAAACTGTACAGAAGAGATAAAAAAATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATCCAACGGGGATGGTAGTTTGTATCGATCCTTAAGGTAAAAGATACAATGATTCGAATGTGAAGTAAATGTAACACCCGCTAGCATTTAAGTGATCTGTCCACAGGTGCGAGGATCATTAGTGTATGAATGGAAAGTTAGAAGTCATCTAAAAATACATAGCGATATGTTATAAGTACGATGTAAAATACAAGCTGTAAGGGGGGGGGAAATACCCTT]




>consensus_7959#0
CCGCCCACGCGTCCGCAGCTCTTAGTGTACGGTCGTGCTCGTTCGCTCGTCTCCGTGAGT
CGTTCCCTCGAGTGTGATTACGACGTCGTGCGTGTACGTTTGTGTGCAATTTATACAGCA
TTGGCCATTGTTTTCCGTTTCACTTCCCAATCTCCTGAACGCGGGCGTGCAGTTGTTTGT
GGTTTGACTTTTCGAGAAAATCCACACCGCGGGCTAATAATTATCAACTTTCGCGGTTTT
ATTAGTTCACGAATTTCGTGTGTGTGTGTGTGTGTGTGTGAGTGGGGGGTGTGTGGTCAA
CTGGGGCGATAAATAATTCCACGAACTACCGCGTTTGTGCGTTGGCCAATAACAAAAAAA
AAGTTCGCAGAAGCTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTC
CAGCAGCGCAGTTGAAACACGTGCGTCACGGTGTGTTTCGGACGCAGTCGGAGCGCAGCA
CGCCGCAGGCATAACAACACGGGCACTATAAATCTCCAACACTCAGCTCACGCATACGCG
CCCTCAGGATGAGTCTCGAACAGGTGCCGACGGTGACGACGCTGCTGCGGGCATCGCGCG
ACGCTAACGAGTATCTGCTGAAGGAAGTGTTCCGAGACATACTGGAGAATGGTATCTCAA
AGGAGAATCTCAACTCAACGGATCGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGA
CGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAAC
CGGACAACGAGGGCAACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTTTCGGACGTGG
TCAACATGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACAACCTCGGCT
TCACGCCGCTGATGAAGGCCGCCCTCCAGGGCAGGACGCGCTGTGCCAAGCTGCTGCTCT
TTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGG
CACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGAC
TGTTGGACAAATCGACACCATGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACA
AGAATGCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTC
GCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGG
TGGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAACTACCTGAAGTCGG
CCACACTGTGCGTGAGTGGTCCGGCACTATCGGCCAATCGGAAGATCATACAGAGCTTGA
TCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCA
AAAAGTATGAAGCATCGCTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAG
TGGATGGCAGCACCACCGACAGCCNGGATGGAACGCCATCACACTCGCCGGTACCGGTCA
GGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCCGCGTGTCAAACTG
TACAGAAGAGATAAAAAAATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGA
AAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATCCAACGGGGA
TGGTAGTTTGTATCGATCCTTAAGGTAAAAGATACAATGATTCGAATGTGAAGTAAATGT
AACACCCGCTAGCATTTAAGTGATCTGTCCACAGGTGCGAGGATCATTAGTGTATGAATG
GAAAGTTAGAAGTCATCTAAAAATACATAGCGATATGTTATAAGTACGATGTAAAATACA
AGCTGTAAGGGGGGGGGAAATACCCTT

consensusID : consensus_7959#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1275
fasta sequence

                              [ATGCAGAATTGCCCCGAGGTGTTATACTGGAGAATGGTATCTCAAGGAGAATCTCAACTCAACGGATCTGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACCGAGGGCAACACGCCGGCACTTTTGCTTGCCAGGCCCGGCTTTTCGGGACCGTGGGTCAACAATGCTTGGATTCACCCAAAGGCTGGTTCGCAAGGCCTGATCCATTCGGATTCCAAAAAGAACAAACTTCGNGGCTTTTCAACGCCCGCTGAATTGAAAGTGGCTGCCCTTCCAGGNGGCCAGTGGAACGCGCTTGTGCCCAAAGCTTTGCGTTGGCNTTCCTTTTGGCCTTGGTGGGGCCAATTCTGGCGCCAAGGTTCCGGAAAAAACCCTGGATTAACCCTGGGGAACCGNAAGGCGGAATTTTTACGGCGGGGGCCTGGTGGAAACCAAATGGTTGGTGGCCAACCGGCCTTTTTATTGGCCCGTTGGCCATAGTGGCAACAAACCCCTTGNGTTGCCCCCTGAAAACCGGAATTAAGGAAACAAATGTTTGGCGTGGCCCCCCTGGTGGGGCCCCCCCTGGAACCGTTGGTTATTGGGCGGAACCCAAAAGAATTTCTGGAACNAATCTCCCTAATTTGGCNGTGGNTCCCGGNGCTCGGAGGTTCCCGCCGACTTGGTACCTATTTTCGATAACGCCCGTTTAACCGCCTGGCGGGTTTGGGAACCGAAAACGGAAAATTTTGCCTGTGCCCTTCCNACAAATGGGGCCAAACCNAGGCCAATGGGCGTTTTGCCGAGGCCAACGTTTTAACACCTCGCCGCCAAAACAGATGTGGCGACCAAAGTAAGACCTGGGCCANATACGACAGATACTTAGCGGCGTTTTTTTCCGATGGGCTCCCCCAATAATAGGTTTTACCCCACTGGCGCGAACAGACACAGGTTAATTTTTTCCCCCTGGGTTTCCAAAAGCNTTTTTTTTAAAAGCCATTGCGTNTTTCCCCCGATAAAGGTGGGAAACCAACCCGCGGANAAATAGGGTGGCCACNGGTTAGCGGGTTCCCGAATCGGGCCCAAAACTACGCGTCGGACTCGTCGGCCGCCCCNAAAAAAATGCAAGTGGNAACAACCCATTTAATCAGAGACCCAGAGAGTGGNGAAATTTCCCTTTAGGGGTTTNCCAAAATGCTCTTTATAGCCCCCTTTCGGAACAAG]

[+] EMBL AL693897             [ATGCAGAATTGCCCCGAGGTGTTATACTGGAGAATGGTATCTCAAGGAGAATCTCAACTCAACGGATCTGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACCGAGGGCAACACGCCGGCACTTTTGCTTGCCAGGCCCGGCTTTTCGGGACCGTGGGTCAACAATGCTTGGATTCACCCAAAGGCTGGTTCGCAAGGCCTGATCCATTCGGATTCCAAAAAGAACAAACTTCGNGGCTTTTCAACGCCCGCTGAATTGAAAGTGGCTGCCCTTCCAGGNGGCCAGTGGAACGCGCTTGTGCCCAAAGCTTTGCGTTGGCNTTCCTTTTGGCCTTGGTGGGGCCAATTCTGGCGCCAAGGTTCCGGAAAAAACCCTGGATTAACCCTGGGGAACCGNAAGGCGGAATTTTTACGGCGGGGGCCTGGTGGAAACCAAATGGTTGGTGGCCAACCGGCCTTTTTATTGGCCCGTTGGCCATAGTGGCAACAAACCCCTTGNGTTGCCCCCTGAAAACCGGAATTAAGGAAACAAATGTTTGGCGTGGCCCCCCTGGTGGGGCCCCCCCTGGAACCGTTGGTTATTGGGCGGAACCCAAAAGAATTTCTGGAACNAATCTCCCTAATTTGGCNGTGGNTCCCGGNGCTCGGAGGTTCCCGCCGACTTGGTACCTATTTTCGATAACGCCCGTTTAACCGCCTGGCGGGTTTGGGAACCGAAAACGGAAAATTTTGCCTGTGCCCTTCCNACAAATGGGGCCAAACCNAGGCCAATGGGCGTTTTGCCGAGGCCAACGTTTTAACACCTCGCCGCCAAAACAGATGTGGCGACCAAAGTAAGACCTGGGCCANATACGACAGATACTTAGCGGCGTTTTTTTCCGATGGGCTCCCCCAATAATAGGTTTTACCCCACTGGCGCGAACAGACACAGGTTAATTTTTTCCCCCTGGGTTTCCAAAAGCNTTTTTTTTAAAAGCCATTGCGTNTTTCCCCCGATAAAGGTGGGAAACCAACCCGCGGANAAATAGGGTGGCCACNGGTTAGCGGGTTCCCGAATCGGGCCCAAAACTACGCGTCGGACTCGTCGGCCGCCCCNAAAAAAATGCAAGTGGNAACAACCCATTTAATCAGAGACCCAGAGAGTGGNGAAATTTCCCTTTAGGGGTTTNCCAAAATGCTCTTTATAGCCCCCTTTCGGAACAAG]




>consensus_7959#1
ATGCAGAATTGCCCCGAGGTGTTATACTGGAGAATGGTATCTCAAGGAGAATCTCAACTC
AACGGATCTGCAGCGGAAGGACGGCCATCTCGTACATCTGCTCGACGAACTTAACCAACT
TTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAACAAACCGGACAACCGAGGGC
AACACGCCGGCACTTTTGCTTGCCAGGCCCGGCTTTTCGGGACCGTGGGTCAACAATGCT
TGGATTCACCCAAAGGCTGGTTCGCAAGGCCTGATCCATTCGGATTCCAAAAAGAACAAA
CTTCGNGGCTTTTCAACGCCCGCTGAATTGAAAGTGGCTGCCCTTCCAGGNGGCCAGTGG
AACGCGCTTGTGCCCAAAGCTTTGCGTTGGCNTTCCTTTTGGCCTTGGTGGGGCCAATTC
TGGCGCCAAGGTTCCGGAAAAAACCCTGGATTAACCCTGGGGAACCGNAAGGCGGAATTT
TTACGGCGGGGGCCTGGTGGAAACCAAATGGTTGGTGGCCAACCGGCCTTTTTATTGGCC
CGTTGGCCATAGTGGCAACAAACCCCTTGNGTTGCCCCCTGAAAACCGGAATTAAGGAAA
CAAATGTTTGGCGTGGCCCCCCTGGTGGGGCCCCCCCTGGAACCGTTGGTTATTGGGCGG
AACCCAAAAGAATTTCTGGAACNAATCTCCCTAATTTGGCNGTGGNTCCCGGNGCTCGGA
GGTTCCCGCCGACTTGGTACCTATTTTCGATAACGCCCGTTTAACCGCCTGGCGGGTTTG
GGAACCGAAAACGGAAAATTTTGCCTGTGCCCTTCCNACAAATGGGGCCAAACCNAGGCC
AATGGGCGTTTTGCCGAGGCCAACGTTTTAACACCTCGCCGCCAAAACAGATGTGGCGAC
CAAAGTAAGACCTGGGCCANATACGACAGATACTTAGCGGCGTTTTTTTCCGATGGGCTC
CCCCAATAATAGGTTTTACCCCACTGGCGCGAACAGACACAGGTTAATTTTTTCCCCCTG
GGTTTCCAAAAGCNTTTTTTTTAAAAGCCATTGCGTNTTTCCCCCGATAAAGGTGGGAAA
CCAACCCGCGGANAAATAGGGTGGCCACNGGTTAGCGGGTTCCCGAATCGGGCCCAAAAC
TACGCGTCGGACTCGTCGGCCGCCCCNAAAAAAATGCAAGTGGNAACAACCCATTTAATC
AGAGACCCAGAGAGTGGNGAAATTTCCCTTTAGGGGTTTNCCAAAATGCTCTTTATAGCC
CCCTTTCGGAACAAG

consensusID : consensus_7959#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 939
fasta sequence

                              [GTTCGCTCGTCTCCGTGAGTCGTTCCCCCGAGTGTGATTACGACGTCGTGCGTAACTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCACTATAAACACGTGCGTTACGGTGTGTGCCGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGCTGGACAAATCGACACCGTGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATTCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTCGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAATTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCCGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTATGAAGCATCACTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCGGAATGGAACGCCATCACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCTGCGTGTCAAACTGTACAGAAGAGATTGAGATATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATC]

[+] EMBL CNS08VRO             [GTTCGCTCGTCTCCGTGAGTCGTTCCCCCGAGTGTGATTACGACGTCGTGCGTAACTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCACTATAAACACGTGCGTTACGGTGTGTGCCGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGCTGGACAAATCGACACCGTGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATTCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTCGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAATTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCCGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGGAAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTATGAAGCATCACTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCGGAATGGAACGCCATCACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCTGCGTGTCAAACTGTACAGAAGAGATTGAGATATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATC]




>consensus_7959#2
GTTCGCTCGTCTCCGTGAGTCGTTCCCCCGAGTGTGATTACGACGTCGTGCGTAACTCCA
GCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTCCAGCAGCGCACTATAAAC
ACGTGCGTTACGGTGTGTGCCGGACGCGCTGTGCCAAGCTGCTGCTCTTTGCTGGGGCAT
CGCCAGTCGAAACCGATACCGGACGAGGATTTAGGGCGGAACAGTGGGCACGCTTTTGCG
GCAGGCACACCTGTGCCGAAACGATAGAACAGTGCGCCCGGGCCCGACTGCTGGACAAAT
CGACACCGTGCGGTCGGTGGTCGCACGACATCAACCTACCGGTGGACAAGAATTCGCTCA
AGGCACGCAGCTGCAGCATTACGCCACAGCCAACGCAAAATGGCTTTCGCTCCAAGTTCC
GCAAAGTATTTCCGTTCAACTTTAACTCCTCCAAGGACACGAAGGCGGTCGTCAGCAAGG
AGGGCGAAGAGAACTACACCAAGGATCTGGTCAATTACCTGAAGTCGGCCACACTGTGCG
TGAGTGGTCCGGCACTATCCGCCAATCGGAAGATCATACAGAGCTTGATCCGACCGTTGG
AAGTACCAAAACTTGAGGTGACGTATGCAAACAATAATGCACTCATCAAAAAGTATGAAG
CATCACTGGAATCCAACGGATCGGCCGAAACGGTGCGGCGTGCTTCAGTGGATGGCAGCA
CCACCGACAGCCGGAATGGAACGCCATCACACTCGCCGGTACCGGTCAGGGCGAAGGTAC
GGAACTAGACGAGCTCTCCAGACCTGTGTGTGTCTGCGTGTCAAACTGTACAGAAGAGAT
TGAGATATTTAGTCTTCTAGAATACATGCGATCATTCTATGGCGATGAAAGCTCTCTGTT
GATGCGACATCTCGTCCTCTCCTCAATGGACCCACCATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7959#0      CCGCCCACGCGTCCGCAGCTCTTAGTGTACGGTCGTGCTCGTTCGCTCGTCTCCGTGAGT 60
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      CGTTCCCTCGAGTGTGATTACGACGTCGTGCGTGTACGTTTGTGTGCAATTTATACAGCA 120
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      TTGGCCATTGTTTTCCGTTTCACTTCCCAATCTCCTGAACGCGGGCGTGCAGTTGTTTGT 180
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      GGTTTGACTTTTCGAGAAAATCCACACCGCGGGCTAATAATTATCAACTTTCGCGGTTTT 240
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      ATTAGTTCACGAATTTCGTGTGTGTGTGTGTGTGTGTGTGAGTGGGGGGTGTGTGGTCAA 300
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      CTGGGGCGATAAATAATTCCACGAACTACCGCGTTTGTGCGTTGGCCAATAACAAAAAAA 360
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      AAGTTCGCAGAAGCTCCAGCCGACACCGACCGTTAGTTGCCGCTTTCGTACGCCTTTCTC 420
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      CAGCAGCGCAGTTGAAACACGTGCGTCACGGTGTGTTTCGGACGCAGTCGGAGCGCAGCA 480
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      CGCCGCAGGCATAACAACACGGGCACTATAAATCTCCAACACTCAGCTCACGCATACGCG 540
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      CCCTCAGGATGAGTCTCGAACAGGTGCCGACGGTGACGACGCTGCTGCGGGCATCGCGCG 600
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------------------------------------------------
                                                                                  

consensus_7959#0      ACGCTAACGAGTATCTGCTGAAGGAAGTGTTCCGAGAC---ATACTGGAGAATGGTATCT 657
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ------------------ATGCAGAATTGCCCCGAGGTGTTATACTGGAGAATGGTATCT 42
                                                                                  

consensus_7959#0      CAAAGGAGAATCTCAACTCAACGGATC-GCAGCGGAAGGACGGCCATCTCGTACATCTGC 716
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      CAA-GGAGAATCTCAACTCAACGGATCTGCAGCGGAAGGACGGCCATCTCGTACATCTGC 101
                                                                                  

consensus_7959#0      TCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAAC 776
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      TCGACGAACTTAACCAACTTTTTGGAGCTGTTCCTGCAACTGCCCGGCATCGATGTCAAC 161
                                                                                  

consensus_7959#0      AAACCGGACAAC-GAGGGCAACACGCCGCTGCACTTTGCTGCCCAGGCCGGCCTTTCGGA 835
consensus_7959#2      ----------------GTTCGCTCGTCTCCGTGAGTCGTTCCCCCGAGTGTGATTACG-A 43
consensus_7959#1      AAACCGGACAACCGAGGGCAACACGCCGGCACTTTTGCTTGCCAGGCCCGGCTTTTCGGG 221
                                      *    * ** *        *   * **  *   *   ** **  

consensus_7959#0      --CGTGGT-CAACA-TGCTGATCACCAAGTGTCGCAGCCTGATCATCGATCCAAAGAACA 891
consensus_7959#2      --CGTCGTGCGTAA-CTCCAGCCGACACCGACCGTTAGTTGCCGCTT--TCGTACGCCTT 98
consensus_7959#1      ACCGTGGGTCAACAATGCTTGGATTCAC---CCAAAGGCTGGT------TCGCAAGGCCT 272
                        *** *  *   *   *       **     *      **        **  * *    

consensus_7959#0      ACCTCGGCTTCACGCCGCTGATGAAGGCCGCCCTCCAGG-GCAGGACGCGCTGTGCC--A 948
consensus_7959#2      TCTCCAGCAGCGCACTATAAACACGTGCGTTACGGTGTGTGCCGGACGCGCTGTGCC--A 156
consensus_7959#1      GATCCATTCGGATTCCAAAAAGAACAAACTTCGNGGCTTTTCAACGCCCGCTGAATTGAA 332
                          *         *     *                    *    * *****      *

consensus_7959#0      AGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGG 1008
consensus_7959#2      AGCTGCTGCTCTTTGCTGGGGCATCGCCAGTCGAAACCGATACCGGACGAGGATTTAGGG 216
consensus_7959#1      AGTGGCTGCCCTTC-CAGGNG----GCCAGTGGAACGCGCTTGTGCCCAAAGCTTTGCGT 387
                      **  ***** ***  * ** *    ****** ***  ** *   *  * * * ***  * 

consensus_7959#0      CGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCG 1068
consensus_7959#2      CGGAACAGTGGGCACGCTTTTGCGGCAGGCACACCTGTGCCGAAACGATAGAACAGTGCG 276
consensus_7959#1      TGGCNTTCCTTTTG-GCCTTGGTGGGGCCAATTCTGGCGCCAAGGTTCCGGAAAAA---A 443
                       **            ** ** * **     *  *  * *** *       *** *     

consensus_7959#0      CCCGGGCCCGAC--TGTTGGACAAATCGACACCATGCGGTCGGTGGTCGCACGACATCAA 1126
consensus_7959#2      CCCGGGCCCGAC--TGCTGGACAAATCGACACCGTGCGGTCGGTGGTCGCACGACATCAA 334
consensus_7959#1      CCCTGGATTAACCCTGGGGAACCGNAAGGCGGAATTTTTACGGCGGGGGCCTGGTGGAAA 503
                      *** **    **  **  * **     * *    *     *** **  **  *     **

consensus_7959#0      CCTACCGGTGGACAAGAATGCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAAC 1186
consensus_7959#2      CCTACCGGTGGACAAGAATTCGCTCAAGGCACGCAGCTGCAGCATTACGCCACAGCCAAC 394
consensus_7959#1      CCAAATGGTTGGTGGCCAACCG-----GCCTTTTTATTGGCCCGTTG-GCCATAGT---G 554
                      ** *  *** *      *  **     * *       **   * **  **** **     

consensus_7959#0      GCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAA 1246
consensus_7959#2      GCAAAATGGCTTTCGCTCCAAGTTCCGCAAAGTATTTCCGTTCAACTTTAACTCCTCCAA 454
consensus_7959#1      GCAACAAACCCCTTGNGTTGCCCCCTGAAAACCGGAATTAAGGAAACAAATGTTTGGCGT 614
                      **** *   *  * *         * * ***            **    *  *    *  

consensus_7959#0      GGACACGAAGGCGGTGGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAA 1306
consensus_7959#2      GGACACGAAGGCGGTCGTCAGCAAGGAGGGCGAAGAGAACTACACCAAGGATCTGGTCAA 514
consensus_7959#1      GGCCCCCCTGGTGG-GGCCCCCCCTGGAACCGTTGGTTATTGGGC--GGAACCCAAAAGA 671
                      ** * *   ** **  * *  *   *    **  *   * *   *   * * *      *

consensus_7959#0      CTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCGGCCAATCGGAAGAT 1366
consensus_7959#2      TTACCTGAAGTCGGCCACACTGTGCGTGAGTGGTCCGGCACTATCCGCCAATCGGAAGAT 574
consensus_7959#1      ATTTCTGGAACNAATCTC------CCTAATTTGGCNGTGGNTCCCGGN-GCTCGGAGGTT 724
                       *  *** *      * *      * * * * * * *    *  * *    ***** * *

consensus_7959#0      CATACAGAGCTTGATCCGACCGTTGGAAGTACCA----AAACTTGAGGTGACGTATGCAA 1422
consensus_7959#2      CATACAGAGCTTGATCCGACCGTTGGAAGTACCA----AAACTTGAGGTGACGTATGCAA 630
consensus_7959#1      CCCGCCGACTTGGTACCTATTTTCGATAACGCCCGTTTAACCGCCTGGCGGGTTTGGGAA 784
                      *   * **  * *  ** *   * *  *   **     ** *    ** *   *  * **

consensus_7959#0      ACAATAATGCACTCATCAAAAAGTATGAAGC--ATCGCTGGAATCCAACGGATCGGCCGA 1480
consensus_7959#2      ACAATAATGCACTCATCAAAAAGTATGAAGC--ATCACTGGAATCCAACGGATCGGCCGA 688
consensus_7959#1      CCGAAAACGGAAAATTTTGCCTGTGCCCTTCCNACAAATGGGGCCAAACCNA--GGCCAA 842
                       * * ** * *    *      **      *  *    ***   * ***  *  **** *

consensus_7959#0      AACG-GTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCNGGATGGAACGCCAT 1539
consensus_7959#2      AACG-GTGCGGCGTGCTTCAGTGGATGGCAGCACCACCGACAGCCGGAATGGAACGCCAT 747
consensus_7959#1      TGGGCGTTTTGCCGAGGCCAACGTTTTAACACCTCGCCGCCAAAACAGATGTGGCGACCA 902
                         * **   **      **  *  *     *  * *** **      ***   ** *  

consensus_7959#0      CACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGT 1599
consensus_7959#2      CACACTCGCCGGTACCGGTCAGGGCGAAGGTACGGAACTAGACGAGCTCTCCAGACCTGT 807
consensus_7959#1      AAGTAAGACCTGGGCCANATACGAC--AGATACTTAGC--GGCGTTTTTTTCCGATGGGC 958
                       *      ** *  **    * * *  ** ***  * *  * **   * * * **   * 

consensus_7959#0      GTGTGTCCGCGTGTCAAACTGTACAGAAGAGATAAAAAAATTTAGTCTTCTAGAATACAT 1659
consensus_7959#2      GTGTGTCTGCGTGTCAAACTGTACAGAAGAGATTGAGATATTTAGTCTTCTAGAATACAT 867
consensus_7959#1      ---TCCCCCAATAATAGGTTTTACCCCACTGGCGCGAACAGACA------CAGGTTA-AT 1008
                         *  *    *   *   * ***   *  *      * *   *       **  ** **

consensus_7959#0      GCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAAT 1719
consensus_7959#2      GCGATCATTCTATGGCGATGAAAGCTCTCTGTTGATGCGACATCTCGTCCTCTCCTCAAT 927
consensus_7959#1      TTTTTCCCCCTGGGTTTCCAAAAGCNTTTTTTTTAAAAGCCATTGCGTNTTTCCCCCGAT 1068
                          **   **  *      *****  * * ** *   * ***  ***  *  ** * **

consensus_7959#0      GGACCCACCATCCAACGGGGATGGTAGTTTGTATCGATCCTTAAGGTAAAAGATACAATG 1779
consensus_7959#2      GGACCCACCATC------------------------------------------------ 939
consensus_7959#1      AAAGGTGGGAAACCAACCCGCGGANAAATAGGGTGG--CCACNGGTTAGCGGGTTCCCGA 1126
                        *      *                                                  

consensus_7959#0      ATTCGAATGTGAAGTAAATGTAACACCCGCTAGCATTTAAGTGATCTGTCCACAGGTGCG 1839
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      ATCGGGCCCAAAACTACGCGTCGGACTCGTCGGCCGCCCCNAAAAAAATGCAAGTGGNAA 1186
                                                                                  

consensus_7959#0      AGGATCATTAGTGTATGAATGGAAAGTTAGAAGTCATCTAAAAATACATAGCGATATGTT 1899
consensus_7959#2      ------------------------------------------------------------
consensus_7959#1      CAACCCATTTAATCAGAGACCCAGAGAGTGGNGAAATTT----CCCTTTAGGGGTTTNCC 1242
                                                                                  

consensus_7959#0      ATAAGTACGATGTAAAATACAAGCTGTAAGGGGGGGGGAAATACCCTT 1947
consensus_7959#2      ------------------------------------------------
consensus_7959#1      A-AAATGCTCTTTATAGCCCCCTTTCGGAACAAG-------------- 1275