These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 599 fasta sequence [CCGCCCACGCGTCCGGAAACTGCAAATAATTTCATCAGCAGAACCGTACAATCTGTGTTAAATAGTTATTTTAATAGAAAACTCCACAAACTCCTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCTAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTTGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATATACCTCCAAGGAAAGTGAAAATGTGGATTGATTATTGTTTAAACAGTTTTATGTTCGTCTTTACAGTTTCATATTACCCCTGGACTGA] [+] EMBL BM632037 [CCGCCCACGCGTCCGGAAACTGCAAATAATTTCATCAGCAGAACCGTACAATCTGTGTTAAATAGTTATTTTAATAGAAAACTCCACAAACTCCTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCTAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTTGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATATACCTCCAAGGAAAGTGAAAATGTGGATTGATTATTGTTTAAACAGTTTTATGTTCGTCTTTACAGTTTCATATTACCCCTGGACTGA] [+] EMBL BM588412 [ ccgaacGAAACTGCAAATAATTTCATCAGCAGAACCGTACAATCTGTGTTAAATAGTTATTTTAATAGAAAACTCCACAAACTCCTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCTAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTTGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATATACCTCCAAGGAAAGTGAAAATGTG ] consensusID : consensus_7994#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence [CCGCCCACGCGTCCGCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATGTACCTCCAAGGAAAGTGAAAATGTGGATTGATTATTGTTTAAACAGTTT] [+] EMBL BM595920 [CCGCCCACGCGTCCGCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATGTACCTCCAAGGAAAGTGAAAATGTGGATTGATTATTGTTTAAACAGTTT] consensusID : consensus_7994#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 520 fasta sequence [CCGCTGGTGAAACGAAACTGCAAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATGTACCTCCAAGG] [+] EMBL BM656342 [CCGCTGGTGAAACGAAACTGCAAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAGCGGCATATATAATGTACCTCC ] [+] EMBL BM581370 [ ccGGTGAAACGAAACTGCAAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATAC ] [+] EMBL BM647250 [ ccgACGAAACTGCAAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTGAAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGCGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAG ] [+] EMBL BM577793 [ ccgAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTTCTGATGGCTGAAAACGAGCGCGCCCGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGTACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACATAAGTGCAGAACGGCATATATAATTTACCTCCAAGG] [+] EMBL BM600677 [ ccgAATAATTTCATCAGCAGAACTATACAATCTGCGTTAAATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCGGAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTTCTGATGGCTGAAAACGAGCGCGCCCGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACAAGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGTACGGAAACGTGCTTGGCGAATTGTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTACAGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCATTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTAAATACA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7994#0 CCGCCCACGCGTCCGGAAACTGCAAATAATTTCATCAGCAGAACCGTACAATCTGTGTTA 60 consensus_7994#1 -----------------------------------CCGCCCACGCGTCCG--CTGCGTTA 23 consensus_7994#2 --CCGCTGGTGAAACGAAACTGCAAATAATTTCATCAGCAGAACTATACAATCTGCGTTA 58 * ** * * * *** **** consensus_7994#0 AATAGTTATTTTAATAGAAAACTCCACAAACTCCTCGCTCTGCAGCCATGTCTAGCTTCG 120 consensus_7994#1 AATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCG 83 consensus_7994#2 AATAGTTATTTTCATAGAAAACTCCACAAATTACTCGCTCTGCAGCCATGTCTAGCTTCG 118 ************ ***************** * *************************** consensus_7994#0 GAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTG 180 consensus_7994#1 GAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTG 143 consensus_7994#2 GAAGTGCGGACACGCCGAAAGCAAACGTCGATCCTGAGTTGCAGGACTTCCTGATGGCTG 178 ************************************************************ consensus_7994#0 AAAACGAGCGTGCTAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACA 240 consensus_7994#1 AAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACA 203 consensus_7994#2 AAAACGAGCGTGCCAGGCTTAGCGCACAGATCCACGAGTTCAATGATATCTGCTGGGACA 238 ************* ********************************************** consensus_7994#0 AGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATT 300 consensus_7994#1 AGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATT 263 consensus_7994#2 AGTGCGTGGAGAAGCCGAGCAACAAACTGGACAGCCGGACGGAAACGTGCTTGGCGAATT 298 ************************************************************ consensus_7994#0 GTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTTGCCCAGAGCCTAC 360 consensus_7994#1 GTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTAC 323 consensus_7994#2 GTGTGAACCGCTTCGTCGACACGTCGCTCCTGATCACGCAGCGTTTCGCCCAGAGCCTAC 358 ********************************************** ************* consensus_7994#0 AGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCA 420 consensus_7994#1 AGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCA 383 consensus_7994#2 AGAAGAGCCAGGGAATGTAAAGGGCTCTGGTTAGTGGGGTACCGTTTCAATGGGAACGCA 418 ************************************************************ consensus_7994#0 TTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTA 480 consensus_7994#1 TTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTA 443 consensus_7994#2 TTTTGGGATGTAGTTTTTAGTTTCAGCAGGGCCCTTTAATCATACCATTCTGTTCTGTTA 478 ************************************************************ consensus_7994#0 AATACATAAGTGCAGAGCGGCATATATAATATACCTCCAAGGAAAGTGAAAATGTGGATT 540 consensus_7994#1 AATACATAAGTGCAGAGCGGCATATATAATGTACCTCCAAGGAAAGTGAAAATGTGGATT 503 consensus_7994#2 AATACATAAGTGCAGAGCGGCATATATAATGTACCTCCAAGG------------------ 520 ****************************** *********** consensus_7994#0 GATTATTGTTTAAACAGTTTTATGTTCGTCTTTACAGTTTCATATTACCCCTGGACTGA 599 consensus_7994#1 GATTATTGTTTAAACAGTTT--------------------------------------- 523 consensus_7994#2 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||