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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1023 fasta sequence
[CCGGAACAGCTGACGCCGCACGGTGCGGTACTGTTGGGGCGCGTTACGCGCCGAGCACGCGGCACCGATCAGGTGGTGGTGAAAAACTTTACCCAAGCAATCGCGAAGGTGGCGGCAAATTACGTACCGGCCAAGAAATCGCCCACCGCCATATCGTACAAGGACAGCGGGGTGGACATCGGTGCGGGCGATGAGCTGGTGCAGCGGATTAAACCGTTCGCCAAGTCCACCAACCGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCT-AGGGACGGACGGCGTCGGTACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGGTACGGTCGGCATCGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTTTCTCGATTACTACGCCTGCGGCCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGGCATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAATGCCGGGCATGTACGCGAAGGGCGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGAGCGCAGCAAGATGCTGCCGCGGATGGACTGCATCTGCCCGGGCGACGTTATCCTGGGACTGCCGTCGAGCGGTGTGCACAGCAATGGGTTCAGCTTGGTGCACAAGATACTGGAATTCACCGGCCACAC-TTACAACGATGTGGCACCG-TTCAGTG-CGACGGGGAAATCGTTCGCCGAGGAGCTGCTCGTCCCGACCCGCATCTATGTGCGCGAGCTGCAGTCCCTGCTGGCGGAA-GGGTTGGTGAAGGCGCTCGCCCACATCACGGGCGGTGGGGTTTACGGAAAAACATTCCCCGCGTCCTACCGGCCGGGCGTGGCCGCCTTCCCTCGACCTTACCGAGCTGCACATTCCGCCCATCTTCCGCTGGATGGCGCAGGCGGGCAATGT]
[+] EMBL BM613705 [CCGGAACAGCTGACGCCGCACGGTGCGGTACTGTTGGGGCGCGTTACGCGCCGAGCACGCGGCACCGATCAGGTGGTGGTGAAAAACTTTACCCAAGCAATCGCGAAGGTGGCGGCAAATTACGTACCGGCCAAGAAATCGCCCACCGCCATATCGTACAAGGACAGCGGGGTGGACATCGGTGCGGGCGATGAGCTGGTGCAGCGGATTAAACCGTTCGCCAAGTCCACCAACCGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCT AGGGACGGACGGCGTCGGTACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGGTACGGTCGGCATCGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTTTCTCGATTACTACGCCTGCGGCCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGGCATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAA ]
[+] EMBL BM585195 [ ccGGGTGGACATCGGTGCGGGCGATGAGCTGGTGCAGCGGATTAAACCGTTCGCCAAGTCCACCAACCGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCT AGGGACGGACGGCGTCGGCACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGGTACGGTTGGCATCGATCTGGTGGCCATGTGTGTGAACGACATCATCTGCAACGGGGCGGATCCGCTCGCGTTCCTCGATTACTACGCCTGCGGTCAGCTGGACGTGCCGGTCGCGGCAAAGGTGATCGAGGGCATTGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAATGCCGGGCATGTACGCGAAGGGAGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGAGCGCAGCAAGATGCTGCCGCGGATGGAATGCATCTGCCCGGGCGACGTTATCCTGGGACTGCCGTCGAGCGGTGTGCACAGCAATGGGTTCAGCTTGGTGCACAAGATACTGGAATTCACCGGCCACACTTTACAACGATGTGGCACCGTTTCAGTGCCGACGGGGAAATCGTTC ]
[+] EMBL BM598432 [ ccGCGATGAGCTGGTGCAGCGGATTAAACCGTTCGCCAAGTCCACCAACCGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCTAAGGGACGGAC ]
[+] EMBL BX606544 [ CACCAACCGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCT AGGGACGGACGGCGTCGGCACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGGTACGGTCGGCATCGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTTCCTCGATTACTACGCCTGCGGTCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGGCATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAATGCCGGGCATGTACGCGAAGGGCGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGAGCGCAGCAAGATGCTGCCGCGGATGGACTGCATCTGCCCGGGCGACGTTATCCTGGGACTGCCGTCGAGCGGTGTGCACAGCAATGGGTTCAGCTTGGTGCACAAGATACTGGAATTCACCGGCCACAC TTACAACGATGTGGCACCG TTCAGTG CGACGGGGAAATCGTTCGCCGAGGAGCTGCTCGTCCCGACCCGCATCTATGTGCGCGAGCTGCAGTCCCTGCTGGCGGAA AGGTTGGTGAAGGCGCTCGCCCACATCACGGGCGGTGGGGTTTACGGAAAAACATTCCCCGCGTCCTACCGGCCGGGCGTGGCCGCCTTCCCTCGACCTT ]
[+] EMBL BM629891 [ ccgGGCCCGGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGGGCATGAATCTGGACGATCCCATACTCGTGCT AGGGACGGACGGCGTCGGTACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGGTACGGTCGGCATCGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTTTCTCGATTACTACGCCTGCGGCCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGGCATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAATGCCGGGCATGTACGCGAAGGGCGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGAGCGCAGCAAGATGCTGCCGCGTATGGACTGCATCTGCCCGGGCGACGTTATCCTGGGATTGCCGTCGAGCGGTGTGCACAGCAATGGGTTCAGCTTGGTACACAAGATACTGGAATTCACCGGCCACAC GTACAACGATGTAGCACCG TTCAGTG CGACGGGGAAATCGTTCGCCGAGGAGCTGCTCGTCCCGACCCGCATCTATGTGCGCGAGCTGCAGTCCCTGCTGGCGGAAGGGGTTGGT ]
[+] EMBL BM619729 [ GATTGCGGACTGCACGGTACGGTCGGCATCGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTTTCTCGATTACTACGCCTGCGGCCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGGCATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAATGCCGGGCATGTACGCGAAGGGCGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGAGCGCAGCAAGATGCTGCCGCGTATGGACTGCATCTGCCCGGGCGACGTTATCCTGGGATTGCCGTCGAGCGGTGTGCACAGCAATGGGTTCAGCTTGGTACACAAGATACTGGAATTCACCGGCCACAC GTACAACGATGTAGCACCG TTCAGTG CGACGGGGAAATCGTTCGCCGAGGAGCTGCTCGTCCCGACCCGCATCTATGTGCGCGAGCTGCAGTCCCTGCTGGCGGAA GGGTTGGTGAAGGCGCTCGCCCACATCACCGGCGG CGGGTTTACGG AAAACATTCCCCGCGTCCTGCCGGCC GGCGTGGCCGCCTT CCTCGACCTTACCGAGCTGCACATTCCGCCCATCTTCCGCTGGATGGCGCAGGCGGGCAATGT]
consensusID : consensus_8076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1000 fasta sequence
[CCGCGCGCTGGTGCAGCGCATCAAACCGCTGGCACGTGGTACAAATCGTCCCGGTGTGGTGGGAGGACTCGGTGGGTTTGGTGGATTGTTCCGTTTGAACGATGCGACGTACATCAACCGCGAAGGCAAAACGGTGCGCTACAATGACCCGGTGCTGGTGCAGGGTACGGACGGTGTCGGTACGAAGCTAAAGCTGGCCGAAACGCTCAACTGCTGGGACACGATCGGTATCGATCTGGTGGCAATGTGCGCCAACGATGTGCTGTGCGCCGGGGCGGAACCGCTCGCCTTCCTGGACTACATCGCCTGCGGTCGGCTGGAGGTGCCGACGGCGGCAATGATCGTGAAGGGCATTGCGGAGGGTTGCCGCGAGACGAACTGTGCCCTGCTCGGCGGTGAGACGGCCGAAATGCCCTCGATGTACGAGAAGGGCAAATACGATCTGGCCGGCTACTGTGTCGGGGTGGTCGAGCACGATCAAATCCTGCCGCACGTCGATCGCATTCGGGAGGGCGATCTGGTGATCGGTCTGCCGTCGAGCGGTGTGCACAGCAACGGGTTTCAGCTTGGTGAAACCGCATCCTCCGAGCGTACCGGCACGAAGCTAACCGATCCGGCACCGGTTCAGCGAAGGACGGTCGCAACACGTTCCGGCGAAGGAACTGCTCACCCCGAACAAGCCTGTACGTGACACCGCTGCTACCGTTGC-TGCGGCA-GGGGGGCGACACGGTGAAAGCGCTGGCCCACATTACCGGCGGTGGGCTGGTGGAAAATGTGCCCCGCGTCCTGCCCGATGCGCTGGGCGTGGAGGTGGACTTTGCCGAGGTGAAAATTCCACCTATCTTCGGATGGCTGGCGGCGGCCGGTAACGTGACCGAGCGGGAAATGCTGCGTACGTTCAACTGTGGCATCGGCATGGTGGTGATCGTGTCGCAGAACGATCGCACGTGGAAGGAACAGCTGACGCAGCACGGTGCGGTAACTGTTGGGGCGCGTTACG]
[+] EMBL BM657699 [CCGCGCGCTGGTGCAGCGCATCAAACCGCTGGCACGTGGTACAAATCGTCCCGGTGTGGTGGGAGGACTCGGTGGGTTTGGTGGATTGTTCCGTTTGAACGATGCGACGTACATCAACCGCGAAGGCAAAACGGTGCGCTACAATGACCCGGTGCTGGTGCAGGGTACGGACGGTGTCGGTACGAAGCTAAAGCTGGCCGAAACGCTCAACTGCTGGGACACGATCGGTATCGATCTGGTGGCAATGTGCGCCAACGATGTGCTGTGCGCCGGGGCGGAACCGCTCGCCTTCCTGGACTACATCGCCTGCGGTCGGCTGGAGGTGCCGACGGCGGCAATGATCGTGAAGGGCATTGCGGAGGGTTGCCGCGAGACGAACTGTGCCCTGCTCGGCGGTGAGACGGCCGAAATGCCCTCGATGTACGAGAAGGGCAAATACGATCTGGCCGGCTACTGTGTCGGGGTGGTCGAGCACGATCAAATCCTGCCGCACGTCGATCGCATTCGGGAGGGCGATCTGGTGATCGGTCTGCCGTCGAGCGGTGTGCACAGCAACGGGTTTCAGCTTGGTGAAACCGCATCCTCCGAGCGTACCGGCACGAAGCTAACCGATCCGGCACCGGTTCAGCGAAGGACGGTCGCAACACGTTCCGGCGAAGGAACTGCTCACCCCGAACAAGCCTGTACGTGACACCGCTGCTACCGTTTCTTGCCGCAGGGGGGGCCACCCGGGGAA ]
[+] EMBL BM603198 [ ccgGCCCTCGATGTACGAGAAGGGCAAATACGATCTGGCCGGCTACTGTGTCGGGGTGGTCGAGCACGATCAAATCCTGCCGCACGTCGATCGCATTCGGGAGGGCGATCTGGTGATCGGTCTGCCGTCGAGCGGTGTGCACAGCAACGGG TTCAGCTTGGTG AACCGCATCCT CGAGCGTACCGGCACGAAGCTAACCGATCCGGCACC GTTCAGCG AGGACGGTCGCAGCACGTT CGGCG AGGAACTGCTCACACCG ACGAGCCTGTACGTGACACCGCTGCTACCGTTGC TGCGGCA GGGGGGCGACACGGTGAAAGCGCTGGCCCACATTACCGGCGGTGGGCTGGTGGAAAATGTGCCCCGCGTCCTGCCCGA ]
[+] EMBL BX602896 [ GTACGTGACGCCGCTGCTACCGTTGC TGCGGCA GTGGGGCGACACGGTGAAAGCGCTGGCCCACATTACCGGCGGTGGGCTGGTGGAAAATGTGCCCCGCGTCCTGCCCGATGCGCTGGGCGTGGAGGTGGACTTTGCCGAGGTGAAAATTCCACCTATCTTCGGATGGCTGGCGGCGGCCGGTAACGTGACCGAGCGGGAAATGCTGCGTACGTTCAACTGTGGCATCGGCATGGTGGTGATCGTGTCGCAGAACGATCGCACGTGGAAGGAACAGCTGACGCAGCACGGTGCGGTAACTGTTGGGGCGCGTTACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8076#0 CCGGAACAGCTGACGCCGCACGGTGCGGTACTGTTGGGGCGCGTTACGCGCCGAGCACGC 60
consensus_8076#1 ------------------------------------------------------------
consensus_8076#0 GGCACCGATCAGGTGGTGGTGAAAAACTTTACCCAAGCAATCGCGAAGGTGGCGGCAAAT 120
consensus_8076#1 ------------------------------------------------------------
consensus_8076#0 TACGTACCGGCCAAGAAATCGCCCACCGCCATATCGTACAAGGACAGCGGGGTGGACATC 180
consensus_8076#1 ------------------------------------------------------------
consensus_8076#0 GGTGCGGGCGATGAGCTGGTGCAGCGGATTAAACCGTTCGCCAAGTCCACCAACCGGCCC 240
consensus_8076#1 --------CCGCGCGCTGGTGCAGCGCATCAAACCGCTGGCACGTGGTACAAATCGTCCC 52
* * ************ ** ****** * ** ** ** ** ***
consensus_8076#0 GGTGTGATGGGTGGGCTCGGTGGTTTCGGTGGCCTGTTCAGGCTGCGCGACACGG---GC 297
consensus_8076#1 GGTGTGGTGGGAGGACTCGGTGGGTTTGGTGGATTGTTCCGTTTGAACGATGCGACGTAC 112
****** **** ** ******** ** ***** ***** * ** *** ** *
consensus_8076#0 ATGAATCTGGA---------------------CGATCCCATACTCGTGCTAGGGACGGAC 336
consensus_8076#1 ATCAACCGCGAAGGCAAAACGGTGCGCTACAATGACCCGGTGCTGGTGCAGGGTACGGAC 172
** ** * ** ** ** * ** **** ** ******
consensus_8076#0 GGCGTCGGTACGAAGCTGAAGATTGCGCAGGATTGCGGACTGCACGG-TACGGTCGGCAT 395
consensus_8076#1 GGTGTCGGTACGAAGCTAAAGCTGGC-CGAAACGCTCAACTGCTGGGACACGATCGGTAT 231
** ************** *** * ** * * ***** ** *** **** **
consensus_8076#0 CGATCTGGTGGCCATGTGCGTGAACGACATCATCTGCAACGGTGCGGATCCGCTCGCGTT 455
consensus_8076#1 CGATCTGGTGGCAATGTGCGCCAACGATGTGCTGTGCGCCGGGGCGGAACCGCTCGCCTT 291
************ ******* ***** * * *** *** ***** ******** **
consensus_8076#0 TCTCGATTACTACGCCTGCGGCCAGCTGGACGTGCCGGTCGCAGCAAAGGTGATCGAAGG 515
consensus_8076#1 CCTGGACTACATCGCCTGCGGTCGGCTGGAGGTGCCGACGGCGGCAATGATCGTGAAGGG 351
** ** *** ********* * ****** ****** ** **** * * * * **
consensus_8076#0 CATCGCGGAAGGCTGCCGCCAAGGCAACAGTGCCCTGCTCGGGGGCGAAACGGCCGAAAT 575
consensus_8076#1 CATTGCGGAGGGTTGCCGCGAGACGAACTGTGCCCTGCTCGGCGGTGAGACGGCCGAAAT 411
*** ***** ** ****** * *** ************* ** ** ***********
consensus_8076#0 GCCGGGCATGTACGCGAAGGGCGTGTACGATCTGGCCGGCTTTTCGCTGGGAATAGCCGA 635
consensus_8076#1 GCCCTCGATGTACGAGAAGGGCAAATACGATCTGGCCGGCTACTGTGTCGGGGTGGTCGA 471
*** ******* ******* **************** * * ** * * ***
consensus_8076#0 GCGCAGCAAGATGCTGCCGCGGATGGACTGCATCTGCCCGGGCGACGTTATCCTGGGACT 695
consensus_8076#1 GCACGATCAAATCCTGCCGCACGTCGATCGCATTCGGGAGGGCGATCTGGTGATCGGTCT 531
** * * ** ******* * ** **** * ****** * * * ** **
consensus_8076#0 GCCGTCGAGCGGTGTGCACAGCAATGGGTT-CAGCTTGGTGCA-CAAGATACTG-GAATT 752
consensus_8076#1 GCCGTCGAGCGGTGTGCACAGCAACGGGTTTCAGCTTGGTGAAACCGCATCCTCCGAGCG 591
************************ ***** ********** * * ** ** **
consensus_8076#0 CACCGGCCACACTTACAACGATGTGGCACCG-TTCAGTGC--GACGG--GGAAATCGTTC 807
consensus_8076#1 TACCGGCACGAAGCTAACCGATCCGGCACCGGTTCAGCGAAGGACGGTCGCAACACGTTC 651
****** * * **** ******* ***** * ***** * ** *****
consensus_8076#0 --GCCGAGGAGCTGCTCGTCCCGACCC-GCATCTATGTGCGCGAGCTGCAGTCCCTGCTG 864
consensus_8076#1 CGGCGAAGGAACTGCTCACCCCGAACAAGCCTGTACGTGACACCGCTGCTACCGTTGCTG 711
** **** ****** ***** * ** * ** *** ***** * *****
consensus_8076#0 --GCGGAAGGGT----TGGTGAAGGCGCTCGCCCACATCACGGGCGGTGGGGTTTACGGA 918
consensus_8076#1 CGGCAGGGGGGCGACACGGTGAAAGCGCTGGCCCACATTACCGGCGGTGGG--CTGGTGG 769
** * *** ****** ***** ******** ** ********* * *
consensus_8076#0 AAAACATTCCCCGCGTCCTACCGGCCGGGCGTGGCCGCCTTCCCTCGACCTTACCGAGCT 978
consensus_8076#1 AAAATGTGCCCCGCGTCCTGCCCGATGCGC-TGGGCGTGGAGG-TGGACTTTGCCGAGGT 827
**** * *********** ** * * ** *** ** * *** ** ***** *
consensus_8076#0 GCACATTCCGCCCATCTTCCGCTGGATGGCGCAGGCGGGCAATGT--------------- 1023
consensus_8076#1 GAAAATTCCACCTATCTTCGGATGGCTGGCGGCGGCCGGTAACGTGACCGAGCGGGAAAT 887
* * ***** ** ****** * *** ***** *** ** ** **
consensus_8076#0 ------------------------------------------------------------
consensus_8076#1 GCTGCGTACGTTCAACTGTGGCATCGGCATGGTGGTGATCGTGTCGCAGAACGATCGCAC 947
consensus_8076#0 -----------------------------------------------------
consensus_8076#1 GTGGAAGGAACAGCTGACGCAGCACGGTGCGGTAACTGTTGGGGCGCGTTACG 1000
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||