cluster # 8118

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Anopheles gambiae
cluster # 8118 cluster # 8118 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8118#0 length = 1416 sequences # 7

consensus_8118#1 length = 528 sequences # 1
consensus_8118#2 length = 493 sequences # 1

consensusID : consensus_8118#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1416
fasta sequence

                              [TAGATTCCTACTTGCA-CATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCG-TCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGTTTGGAAAGTAGGTATCGACAAAAAGACAACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAA-GGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGA-GGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCAGCTGCGTGCAGACGCCCGCGC-CCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGGATTTCGCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAACGGGCGCGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCCCAACGCACGGCATAAGTATGTGCAAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACACGCGACGCTGTACGTGTGCGGCGATTCGAAGGTTCTTTTGCCGCAGATAACGGAAACCGTGATCGACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGATTGGCAGGCTAAAGAAGGAGGGTAAATATCGCGAAGATGTTTGGCTGTGAAGGGATAGCTTAAAGCGTAATGGCCAATAAATTCAAGCTCCAACTGGAGCCT]

[+] EMBL CNS08KCR             [TAGATTCCTACTTGCA AATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCG TCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGTTTGGAAAGTAGGTATCGACAAAAAGACAACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAA GGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGA GGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09KX0             [      ctaACTTGCACCATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCG TCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTAAAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGTTTGGAAAGTAGGTATCGACAAAAAGACAACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAAGGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGA GGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGCTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08YTV             [               A CATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCG TCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTCTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGTTTGGAAAGTAGGTATCGACAAAAAGACAACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAA GGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGAGGGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCAGCTGCGTGCAGACGCCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09AG2             [                                                          TAACGCTACCCGCTCTACCATCCAGTTACATCGATCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08KCS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTAACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTAACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGA GGGGGCCAGCCCCACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTTTCTGTCCTTCCTTCAGCTGCGTGCAGACGCCCGCGC CCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGGATTTCGCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAACGGGCGCGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCCCCACGCACGGCATAAGTATGTGCAAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACACGCGACGCTGTACGTGTGCGGCGATTCGAAGGTTCTTTTGCCGCAGATAACGGAAACCGTGATCGACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGATTGGCAGGCTAAAGAAGGAGGGTAAATATCGCGAAGATGTTTGGCTGTGAAGGGATAGCTTAAAGCGTAATGGCCAATAAATTCAAGCTCCAACT       ]
[-] EMBL CNS08YTW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTTCGCTAACACCATTAACTACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGATAGCCAATGCTTACCGCGA GGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCAGCTGCGTGCAGACGCCCGCGC CCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGGATTTCGCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAACGGGCGCGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCCCAACGCACGGCATAAGTATGTGCAAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACACGCGACGCTGTACGTGTGCGGCGATTCGAAGGTTCTTTTGCCGCAGATAACGGAAACCGTGATCGACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGATTGGCAGGCTAAAGAAGGAGGGTAAATATCCCGAAGATGTTTGGCTGTGAAGGGATAGCTTAAAGCGTAATGGCCAATAAATTCAAGCTCCA          ]
[-] EMBL CNS09KX1             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCAGCTGCGTGCAGACGCCCGCGCGCCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGGATTTCGCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAACGGGCGCGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCTCAACGCACGGCATAAGTATGTGCAAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACACGCGACGCTGTACGTGTGCGGCGATTCGAAGGTTTTTTTGCCGCAGATAACGGAAACCGTGATCGACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGATTGGCAGGCTAAAGAAGGAGGGTAAATACCGCGAAGATGTTTGGCTGTGAAGGGATAGCTTAAAGCGTAATGGCCAATAAATTCAAGCTCCAACTGGAGCCT]




>consensus_8118#0
TAGATTCCTACTTGCACATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAA
CGCTACCCGCTCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCAC
TGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGG
AAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACG
ATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAG
GAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAATCTGC
TGTCCAAAGGTGATGTCGTTTGGAAAGTAGGTATCGACAAAAAGACAACTAAAAAAGCTG
CCAAGGTTCCGGCGTTTGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAAGGAGTGTT
TGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACCG
ACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGCATACG
AGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTCCTGTC
GTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTACTCGA
TAGCCAATGCTTACCGCGAGGGGGCCAGCCCAACAACTGTACGATTTATCTTCTCGCACA
ATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGCGACGG
TACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAGGCGAA
ACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCAGCTGC
GTGCAGACGCCCGCGCCCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGGATTTC
GCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAACGGGCG
CGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCCCAACGCACGGCATAAGTATGTGC
AAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACACGCGA
CGCTGTACGTGTGCGGCGATTCGAAGGTTCTTTTGCCGCAGATAACGGAAACCGTGATCG
ACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGATTGGCA
GGCTAAAGAAGGAGGGTAAATATCGCGAAGATGTTTGGCTGTGAAGGGATAGCTTAAAGC
GTAATGGCCAATAAATTCAAGCTCCAACTGGAGCCT

consensusID : consensus_8118#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 528
fasta sequence

                              [CCGCCCACGCGTCCGGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCATGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGGTTGGAAAGTAGGTATCGACAAAAAGACTACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTACTCATTTATCGACAGCTGATAAAGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACC]

[+] EMBL BM648601             [CCGCCCACGCGTCCGGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGCTCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGCTCACCTGCATGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGTGATGTCGGTTGGAAAGTAGGTATCGACAAAAAGACTACTAAAAAAGCTGCCAAGGTTCCGGCGTTTGTGCCTGCTGTACTCATTTATCGACAGCTGATAAAGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACC]




>consensus_8118#1
CCGCCCACGCGTCCGGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAACGCTACCCGC
TCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCACTGCCGGTAGC
TCACCTGCATGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGGAAGCTTGTGT
TTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACGATTTAACATT
AAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAGGAATTTTATC
CTACAACACGGATGCCGACGTCGAGTTCTGCTTGCCCGGTTGAATCTGCTGTCCAAAGGT
GATGTCGGTTGGAAAGTAGGTATCGACAAAAAGACTACTAAAAAAGCTGCCAAGGTTCCG
GCGTTTGTGCCTGCTGTACTCATTTATCGACAGCTGATAAAGGAGTGTTTGGATCTGCAT
GCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCACTACC

consensusID : consensus_8118#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence

                              [NNTGCTCAGCAGATTNCCGAGGTTAACTGACACAGGCATCGACACTTGGCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGGCCGGTTGAATACTACTGTCCAAAGGTGATGTCCGTTTGCAAACGTAGGCATCGACAAAAAGACAACTAAAAAAGCTGGCCAAGGTTCCGGCGTTATGTGCCTGCTGTAGTCAGTTATCGACGACTGATAAAGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTTGTTCGCTAACACCATTCACTACGGACGACGACGATCGCCGCTTTCTGGAACATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAACGGAATCATCTCACTGCTTCAACTAGTACCGTNCCTGTACGTTCCAACCGGGTTCGCATTGCTAACTAGAGCACCTTCCAAGGGCTCATGCCACGGCCTA]

[+] EMBL AL696841             [NNTGCTCAGCAGATTNCCGAGGTTAACTGACACAGGCATCGACACTTGGCGGGTGACACGATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGGCCGGTTGAATACTACTGTCCAAAGGTGATGTCCGTTTGCAAACGTAGGCATCGACAAAAAGACAACTAAAAAAGCTGGCCAAGGTTCCGGCGTTATGTGCCTGCTGTAGTCAGTTATCGACGACTGATAAAGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTTGTTCGCTAACACCATTCACTACGGACGACGACGATCGCCGCTTTCTGGAACATTTTATGCTCCAAAGAGGGAAACGCTGCATACGAGCAGACCGTTCAGAAGGGAAAACGGAATCATCTCACTGCTTCAACTAGTACCGTNCCTGTACGTTCCAACCGGGTTCGCATTGCTAACTAGAGCACCTTCCAAGGGCTCATGCCACGGCCTA]




>consensus_8118#2
NNTGCTCAGCAGATTNCCGAGGTTAACTGACACAGGCATCGACACTTGGCGGGTGACACG
ATAGGAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGGCCGGTTGAAT
ACTACTGTCCAAAGGTGATGTCCGTTTGCAAACGTAGGCATCGACAAAAAGACAACTAAA
AAAGCTGGCCAAGGTTCCGGCGTTATGTGCCTGCTGTAGTCAGTTATCGACGACTGATAA
AGGAGTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTTGTTCGCTAACACCAT
TCACTACGGACGACGACGATCGCCGCTTTCTGGAACATTTTATGCTCCAAAGAGGGAAAC
GCTGCATACGAGCAGACCGTTCAGAAGGGAAAACGGAATCATCTCACTGCTTCAACTAGT
ACCGTNCCTGTACGTTCCAACCGGGTTCGCATTGCTAACTAGAGCACCTTCCAAGGGCTC
ATGCCACGGCCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8118#0      TAGATTCCTACTTGCACATGTCTACGGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAA 60
consensus_8118#1      ---------CCGCCCACGCGTCCG-GGAAGTTTTGCTAGAATTTGAAGGAAAAAAGTTAA 50
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      CGCTACCCGCTCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCAC 120
consensus_8118#1      CGCTACCCGCTCTACCATCCAGTTACATCGTCCTGGAAGAAAATACAGACCATGCCCCAC 110
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      TGCCGGTAGCTCACCTGCAGGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGG 180
consensus_8118#1      TGCCGGTAGCTCACCTGCATGCGCATGTGACTCAACCATTTGGAGCGAGCAATGTTCTGG 170
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      AAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACG 240
consensus_8118#1      AAGCTTGTGTTTCTAATCTCACGACCATTGTTGAAGGTGAAGATGTGAAAACTGTGCACG 230
consensus_8118#2      ----------------------------------------------------NNTGCTCA 8
                                                                            *** * 

consensus_8118#0      ATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAG 300
consensus_8118#1      ATTTAACATTAAGCTATCCGCCTGACACAGGCCATCGACATTGGCCGGGTGACACGATAG 290
consensus_8118#2      GCAGATTNCCGAGGT---TAACTGACACAGGC-ATCGACACTTGGCGGGTGACACGATAG 64
                          *      ** *      *********** ******* * * ***************

consensus_8118#0      GAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGCCCGGTTGAAT-CTG 359
consensus_8118#1      GAATTTTATCCTACAACACGGATGCCGACGTCGAGTTC-TGCTTGCCCGGTTGAAT-CTG 348
consensus_8118#2      GAATTTTATCCTACAACACGGATGCCGACGTCGAGTTCCTGCTTGGCCGGTTGAATACTA 124
                      ************************************** ****** ********** ** 

consensus_8118#0      CTGTCCAAAGGTGATGTCGTTTGGAAA--GTAGGTATCGACAAAAAGACAACTAAAAAAG 417
consensus_8118#1      CTGTCCAAAGGTGATGTCGGTTGGAAA--GTAGGTATCGACAAAAAGACTACTAAAAAAG 406
consensus_8118#2      CTGTCCAAAGGTGATGTCCGTTTGCAAACGTAGGCATCGACAAAAAGACAACTAAAAAAG 184
                      ******************  ** * **  ***** ************** **********

consensus_8118#0      CTG-CCAAGGTTCCGGCGTT-TGTGCCTGCTGTAGTCAGTTATCGACGGCTGATAAAGGA 475
consensus_8118#1      CTG-CCAAGGTTCCGGCGTT-TGTGCCTGCTGTACTCATTTATCGACAGCTGATAAAGGA 464
consensus_8118#2      CTGGCCAAGGTTCCGGCGTTATGTGCCTGCTGTAGTCAGTTATCGACGACTGATAAAGGA 244
                      *** **************** ************* *** ********  ***********

consensus_8118#0      GTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCAC 535
consensus_8118#1      GTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTCGTTCGCTAACACCATTCAC 524
consensus_8118#2      GTGTTTGGATCTGCATGCAGTTCCCAAGAAGCTTCTGATTTGTTCGCTAACACCATTCAC 304
                      **************************************** *******************

consensus_8118#0      TACCGACGACGACGATCGCCGCTTTCTGGAAATTTTATGCTCCAAAGAGGGAAACGCTGC 595
consensus_8118#1      TACC-------------------------------------------------------- 528
consensus_8118#2      TACGGACGACGACGATCGCCGCTTTCTGGAACATTTTATGCTCCAAAGAGGGAAACGCTG 364
                      ***                                                         

consensus_8118#0      ATACGAGCAGACCGTTCAGAAGGGAAAAGGAATCATCTCACTGCTTCAACTAGTGCCGTC 655
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      CATACGAGCAGACCGTTCAGAAGGGAAAACGGAATCATCTCACTGCTTCAACTAGTACCG 424
                                                                                  

consensus_8118#0      CTGTCGTCCAACGGTCGCATTGCTAATAGAGCACCTTCCAAGGCTCATGCCACGACCCTA 715
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      TNCCTGTACGTTCCAACCGGGTTCGCATTGCTAACTAGAGCACCTTCCAAGGGCTCATGC 484
                                                                                  

consensus_8118#0      CTCGATAGCCAATGCTTACCGCGAGGGGGCCAGCCCAACAACTGTACGATTTATCTTCTC 775
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      CACGGCCTA--------------------------------------------------- 493
                                                                                  

consensus_8118#0      GCACAATGCAGAAAATCCCGGCATTACCACCTCGCACCTAAGAGCGTTAGGTAAAGGAGC 835
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      GACGGTACACTTCTACTTCCGCCAGAGCAGTGCCTTTGTCTACGAGCAGCGCGATCTAAG 895
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      GCGAAACATTATAATGGTAGGAACCGGCACGGGAATGTCACCGTATCTGTCCTTCCTTCA 955
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      GCTGCGTGCAGACGCCCGCGCCCGAGGCGAAACGCTTGGTCGAGCCGAATTGATCGTGGG 1015
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      ATTTCGCTATCGAGACCGTGGCTACCTCTGCAAGGCTGAAGTGGAAGAGTATCTGGAAAC 1075
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      GGGCGCGCTGGACGCGTGCTACGAAGCTTTTTCACGCGATCCCAACGCACGGCATAAGTA 1135
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      TGTGCAAAGTCAGATGAAGGAAAATGGTACGAAAATTGTTGAAAACATCCACAATCCACA 1195
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      CGCGACGCTGTACGTGTGCGGCGATTCGAAGGTTCTTTTGCCGCAGATAACGGAAACCGT 1255
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      GATCGACATCCTTGCCGAAGCACCGGGAGCAGAGGACAGGGATGCGATCAAGACATTGAT 1315
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      TGGCAGGCTAAAGAAGGAGGGTAAATATCGCGAAGATGTTTGGCTGTGAAGGGATAGCTT 1375
consensus_8118#1      ------------------------------------------------------------
consensus_8118#2      ------------------------------------------------------------
                                                                                  

consensus_8118#0      AAAGCGTAATGGCCAATAAATTCAAGCTCCAACTGGAGCCT 1416
consensus_8118#1      -----------------------------------------
consensus_8118#2      -----------------------------------------