cluster # 813

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Anopheles gambiae
cluster # 813 cluster # 813 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_813#0 length = 224 sequences # 1

consensus_813#1 length = 167 sequences # 1

consensusID : consensus_813#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence

                              [TGGGGGACGTGAAATAAAAGAAAAAAAGAATAAAATTAAAAGTTAAATTTTTGGTTTTTAAGAGCTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAAGGAGGGTAAGGGAAAGGGTGGAGAGGGGGGTGAGTTTAGGTAGGGTCAAAGGGAGGGCGGGAAAAAGGGGGGGTCTCGACCTGAGCTTTAAAATTACCTAGAGG]

[+] EMBL CNS08H0U             [TGGGGGACGTGAAATAAAAGAAAAAAAGAATAAAATTAAAAGTTAAATTTTTGGTTTTTAAGAGCTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAAGGAGGGTAAGGGAAAGGGTGGAGAGGGGGGTGAGTTTAGGTAGGGTCAAAGGGAGGGCGGGAAAAAGGGGGGGTCTCGACCTGAGCTTTAAAATTACCTAGAGG]




>consensus_813#0
TGGGGGACGTGAAATAAAAGAAAAAAAGAATAAAATTAAAAGTTAAATTTTTGGTTTTTA
AGAGCTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAA
GGAGGGTAAGGGAAAGGGTGGAGAGGGGGGTGAGTTTAGGTAGGGTCAAAGGGAGGGCGG
GAAAAAGGGGGGGTCTCGACCTGAGCTTTAAAATTACCTAGAGG

consensusID : consensus_813#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 167
fasta sequence

                              [GAGTTAAATTTATGGTTTTTAAGAGGTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAAGGAGGGTAAGGAAAAGGGTGGAGAGAGGGGTGAGTTTAGGTAGGGTACAAGGGAGAGGGGGAAAAAGGGGGGGTTTAGAATTGAGT]

[+] EMBL CNS08TB8             [GAGTTAAATTTATGGTTTTTAAGAGGTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAAGGAGGGTAAGGAAAAGGGTGGAGAGAGGGGTGAGTTTAGGTAGGGTACAAGGGAGAGGGGGAAAAAGGGGGGGTTTAGAATTGAGT]




>consensus_813#1
GAGTTAAATTTATGGTTTTTAAGAGGTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAA
AAAAGAGGTAGAGTTGAGAAAGGAGGGTAAGGAAAAGGGTGGAGAGAGGGGTGAGTTTAG
GTAGGGTACAAGGGAGAGGGGGAAAAAGGGGGGGTTTAGAATTGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_813#0      TGGGGGACGTGAAATAAAAGAAAAAAAGAATAAAATTAAAAGTTAAATTTTTGGTTTTTA 60
consensus_813#1      ---------------------------------------GAGTTAAATTTATGGTTTTTA 21
                                                             ********** *********

consensus_813#0      AGAGCTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAA 120
consensus_813#1      AGAGGTTGGATTTGTAAGGGGGGAGAAAAGAAAAAGAAAAAAAGAGGTAGAGTTGAGAAA 81
                     **** *******************************************************

consensus_813#0      GGAGGGTAAGGGAAAGGGTGGAGAGGGGGGTGAGTTTAGGTAGGGTCAAAGGGAGGGCGG 180
consensus_813#1      GGAGGGTAAGGAAAAGGGTGGAGAGAGGGGTGAGTTTAGGTAGGGTACAAGGGAGAGGGG 141
                     *********** ************* ********************  ******* * **

consensus_813#0      GAAAAAGGGGGGGTCTCGACCTGAGCTTTAAAATTACCTAGAGG 224
consensus_813#1      GAAAAAGGGGGGGTTTAGAATTGAGT------------------ 167
                     ************** * **  ****