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Anopheles gambiae
cluster # 8153 cluster # 8153       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8153#0 length = 1292 sequences # 1  
consensus_8153#1 length = 850 sequences # 2  
consensus_8153#2 length = 796 sequences # 4  
consensus_8153#3 length = 621 sequences # 1  
consensus_8153#4 length = 328 sequences # 1  

consensusID : consensus_8153#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1292
fasta sequence
                              [CCCCGAGGTTAAATTTCGCTAGACTAACACCATCAACCGGAACATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCTGGATCTGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTTGGATATGCGCGAAACGGCTGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGTGCATCCTGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTACAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGANACGCTATNGGTTCCGACGGCCTGGAGGGATGCAGTACCGGCCAGNGGCGAAGCACTTAATCATTCCCGCACGCCGGCANACCGACGTTNCTATCACTCGCATTCCGCTGCGCTATGCTGCGCGCTCCTACNCACTCACTTGATCATCTCTCCTGCTTCAANGACAACATAACAACCCACCACGCAATCCCCNCACCACACACACACACCCCNACCACGCGCCATGTATGCGCGCCCGCAAGGCTTATTCCCCCTTCAACTGANGNCTNCACACCNNANCATTGNCACCTGGACCGTCCGCTCACCAAACGTACTAACTGGGAAAAACCCCTGCGCGTATTACCCCCAAACTATAAANGGGCGANTTGTCAGGANAGAATTTCCCCCATTTACGGCCAAGCNTGACGCTAATACTAGCCGCACCAAGGGACCTGGCACCGCNAATTAGCCCTTNCCCACCAAATTCGTANCACACCCTGAATGTTGCNNAAACTGNACCCNCCCCTCNCNAACNGCGCNCACTANANCACCAGCCGGACTATAGTAGTATCAGCCACNAACTTACCCCATACACTTGCACAGTCCCTATCGCACGACCCATNAACATACAGNCATATCACATAGCATACCCCANCTACAACAGCCACTCTACACACATTATACTACNCCCCCAACATTAGTTTANTNCCACCNAAAGCACATGNNCAATTAATNTCACCCTAATTAAANAATATTTACACCCCCACCAACACCCA]

[+] EMBL AL695034             [CCCCGAGGTTAAATTTCGCTAGACTAACACCATCAACCGGAACATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCTGGATCTGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTTGGATATGCGCGAAACGGCTGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGTGCATCCTGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTACAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGANACGCTATNGGTTCCGACGGCCTGGAGGGATGCAGTACCGGCCAGNGGCGAAGCACTTAATCATTCCCGCACGCCGGCANACCGACGTTNCTATCACTCGCATTCCGCTGCGCTATGCTGCGCGCTCCTACNCACTCACTTGATCATCTCTCCTGCTTCAANGACAACATAACAACCCACCACGCAATCCCCNCACCACACACACACACCCCNACCACGCGCCATGTATGCGCGCCCGCAAGGCTTATTCCCCCTTCAACTGANGNCTNCACACCNNANCATTGNCACCTGGACCGTCCGCTCACCAAACGTACTAACTGGGAAAAACCCCTGCGCGTATTACCCCCAAACTATAAANGGGCGANTTGTCAGGANAGAATTTCCCCCATTTACGGCCAAGCNTGACGCTAATACTAGCCGCACCAAGGGACCTGGCACCGCNAATTAGCCCTTNCCCACCAAATTCGTANCACACCCTGAATGTTGCNNAAACTGNACCCNCCCCTCNCNAACNGCGCNCACTANANCACCAGCCGGACTATAGTAGTATCAGCCACNAACTTACCCCATACACTTGCACAGTCCCTATCGCACGACCCATNAACATACAGNCATATCACATAGCATACCCCANCTACAACAGCCACTCTACACACATTATACTACNCCCCCAACATTAGTTTANTNCCACCNAAAGCACATGNNCAATTAATNTCACCCTAATTAAANAATATTTACACCCCCACCAACACCCA]


>consensus_8153#0 CCCCGAGGTTAAATTTCGCTAGACTAACACCATCAACCGGAACATGTCTCGCCAAAGCAC ACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGT GTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCTGGA TCTGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGC CGGTGTTTTGGATATGCGCGAAACGGCTGACAAAATACAGCTCGCCTTCCGGATGTACCT CAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTT CGACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTA CAGCTCGATCCTTTGCGGTGCATCCTGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCA GTGTTGGTTACAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGANAC GCTATNGGTTCCGACGGCCTGGAGGGATGCAGTACCGGCCAGNGGCGAAGCACTTAATCA TTCCCGCACGCCGGCANACCGACGTTNCTATCACTCGCATTCCGCTGCGCTATGCTGCGC GCTCCTACNCACTCACTTGATCATCTCTCCTGCTTCAANGACAACATAACAACCCACCAC GCAATCCCCNCACCACACACACACACCCCNACCACGCGCCATGTATGCGCGCCCGCAAGG CTTATTCCCCCTTCAACTGANGNCTNCACACCNNANCATTGNCACCTGGACCGTCCGCTC ACCAAACGTACTAACTGGGAAAAACCCCTGCGCGTATTACCCCCAAACTATAAANGGGCG ANTTGTCAGGANAGAATTTCCCCCATTTACGGCCAAGCNTGACGCTAATACTAGCCGCAC CAAGGGACCTGGCACCGCNAATTAGCCCTTNCCCACCAAATTCGTANCACACCCTGAATG TTGCNNAAACTGNACCCNCCCCTCNCNAACNGCGCNCACTANANCACCAGCCGGACTATA GTAGTATCAGCCACNAACTTACCCCATACACTTGCACAGTCCCTATCGCACGACCCATNA ACATACAGNCATATCACATAGCATACCCCANCTACAACAGCCACTCTACACACATTATAC TACNCCCCCAACATTAGTTTANTNCCACCNAAAGCACATGNNCAATTAATNTCACCCTAA TTAAANAATATTTACACCCCCACCAACACCCA



consensusID : consensus_8153#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 850
fasta sequence
                              [CGTAGGAAGTACACAGTTTTAAGGTTTAAGTGCTACGAACGAGTCGTAAAATGCAATAAAAACACGATAACATAGTTCACTCGAAAGCACCTTTCTTCTTTCTCGGTCTGCTGGCTTTCCCCGTGGGCCGGAGCTGTGCGGCGCTGTGGTTTGTTTTCGGAACTCCTTCCCATCATTTCCCCTTTTTCCTTTCCTTTCCTTGCATCTTTTCACTCACGACTCACCTGCTCTGTTCGCGTTTGCAGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGACGTTTTTCATCGCATTCCGTGCGGTTATGCTGCGCGTTCTAAAATCACTTGATATTCTCTGTTAAGAAAATAAAAACCACACGAATCC]

[+] EMBL BX617151             [CGTAGGAAGTACACAGTTTTAAGGTTTAAGTGCTACGAACGAGTCGTAAAATGCAATAAAAACACGATAACATAGTTCACTCGAAAGCACCTTTCTTCTTTCTCGGTCTGCTGGCTTTCCCCGTGGGCCGGAGCTGTGCGGCGCTGTGGTTTGTTTTCGGAACTCCTTCCCATCATTTCCCCTTTTTCCTTTCCTTTCCTTGCATCTTTTCACTCACGACTCACCTGCTCTGTTCGCGTTTGCAGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCA                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX627567             [                                                                                                                                                                                                                                             agaaagtGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGACGTTTTTCATCGCATTCCGTGCGGTTATGCTGCGCGTTCTAAAATCACTTGATATTCTCTGTTAAGAAAATAAAAACCACACGAATCC]


>consensus_8153#1 CGTAGGAAGTACACAGTTTTAAGGTTTAAGTGCTACGAACGAGTCGTAAAATGCAATAAA AACACGATAACATAGTTCACTCGAAAGCACCTTTCTTCTTTCTCGGTCTGCTGGCTTTCC CCGTGGGCCGGAGCTGTGCGGCGCTGTGGTTTGTTTTCGGAACTCCTTCCCATCATTTCC CCTTTTTCCTTTCCTTTCCTTGCATCTTTTCACTCACGACTCACCTGCTCTGTTCGCGTT TGCAGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTG ACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCA TGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCG AAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGACCATCT CGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACTGACCG AGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCT GCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACC AGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATG CAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGACGTTTTTCATCGCATTCC GTGCGGTTATGCTGCGCGTTCTAAAATCACTTGATATTCTCTGTTAAGAAAATAAAAACC ACACGAATCC



consensusID : consensus_8153#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 796
fasta sequence
                              [CCGGCCAAACTTGTCAAGCGGACGCTTGTGTTGAGGCTGTCATACACTGGGGGAAAAACATAAGCAAATTCTTGTTTTTCCATCGCTGATAGTGCTATCGAAAATTCGCGATT-TTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCG-CCTTCCGGATGTACCTGAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACT-GACCGAG-TTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGACGTTTTTCATCGCATTCCGTGCGGTTATGCTGCGCGTTCTAAATCACTTGATATTCTCTGTTAAGAAATAAAAACA]

[+] EMBL BM576166             [CCGGCCAAACTTGTCAAGCGGACGCTTGTGTTGAGGCTGTCATACACTGGGGGAAAAACATAAGCAAATTCTTGTTTTTCCATCGCTGATAGTGCTATCGAAAATTCGCGATT TTCAGAGGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACTTTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGTTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCGCCCTTCCGGATGTACCTGAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCCCTCATCTTCGACACGAACCCACTGGACCGAGTTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCG                                                                                                                                                                                                                                                           ]
[+] EMBL BX629048             [                                                                       TTGTTTTTCCATCGCTGATAGTGCTATCGAAAATTCGCGATT TTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCG CCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACT GACCGAG TTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAG                                                                                                    ]
[+] EMBL BX619750             [                                                                         ttnnTTCCATCGCTGATAGTGCTATCGAAAATTCGCGATTGTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAANATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACATACGGAGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCG CCTTCCGGATGTACCTGAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACT GACCGAG TATGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAGGTGCAATGTTGGTTCAGCCAGGAt                                                                                                                                                                                   ]
[+] EMBL BX617667             [                                                                                        ATAGTGCTATCGAAAATTCGCGATT TTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGATCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCG CCTTCCGGATGTACCTCAACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCGACACGAACCCACT GACCGAG TTTGTGGAGCTGCCGGCCGACCATCAGCAGCTACGGTACAGCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTGTTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGACGTTTTTCATCGCATTCCGTGCGGTTATGCTGCGCGTTCTAAATCACTTGATATTCTCTGTTAAGAAATAAAAACA]


>consensus_8153#2 CCGGCCAAACTTGTCAAGCGGACGCTTGTGTTGAGGCTGTCATACACTGGGGGAAAAACA TAAGCAAATTCTTGTTTTTCCATCGCTGATAGTGCTATCGAAAATTCGCGATTTTCAGGA GGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCA CACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCG TGTCCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGCTCGATCGGA TCGGCTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCC GGTGTTTGGATATGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTGA ACGTGCAGCCGACCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCTTCG ACACGAACCCACTGACCGAGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACA GCTCGATCCTTTGCGGCTGCATCCGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGT GTTGGTTCAGCCAGGACCAGCTGAAGGGCGATGCAACGACGGAGATACGGGTGAAGTTTG TTCGACGGCTGGAGGATGCAGTACCGGCAGGGGAAGATTAATCATTTTCGAGCGGAAAGA CGTTTTTCATCGCATTCCGTGCGGTTATGCTGCGCGTTCTAAATCACTTGATATTCTCTG TTAAGAAATAAAAACA



consensusID : consensus_8153#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence
                              [CCGGTGCTATCGAAAATTCGCGATTTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGTGAGGAGTTGTGAATCCCCCCGGGTGTAAAGCATAGGCGTTTTGTGTGTTGCGTATCCGTCGGGTAGCGTCGTCTCGTCATTCCTCGTACCGCGTGTAACGACGCCCGAAAAAGTGTGCACTTGTTTGTGGGGTTGTTCAATGTTTAGCCGTTTTTGTTGCGCTTCCGAAACGTGTTTCCCTATCGCGGCCTAGGCATTCTACTCAAAGACGCGTTTGACTACAACGACGACGAGTCGACGAGCGAGCAGTAAGGCGGCGGTTTACGGTGCATCTATCAGCGAGGAATAAGTTACAGCACAGCTCGTAGCAAACTATGATAACCATGAATAACACAGCGACAGCCAACACGCTGGGTGGAATCACATTCTCCGACCTGACCGGAGCCACCACAGCAACCGGACAGGGGCACGGGAGGCCTACAGCTGGTACAGCTCAGCCAAGTCATGCCCGACCAAAACTCGCAGCAACTGGTTTATGCAGAGTCTACAGCAGCAGCCTTCACTG]

[+] EMBL BM613975             [CCGGTGCTATCGAAAATTCGCGATTTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGTGAGGAGTTGTGAATCCCCCCGGGTGTAAAGCATAGGCGTTTTGTGTGTTGCGTATCCGTCGGGTAGCGTCGTCTCGTCATTCCTCGTACCGCGTGTAACGACGCCCGAAAAAGTGTGCACTTGTTTGTGGGGTTGTTCAATGTTTAGCCGTTTTTGTTGCGCTTCCGAAACGTGTTTCCCTATCGCGGCCTAGGCATTCTACTCAAAGACGCGTTTGACTACAACGACGACGAGTCGACGAGCGAGCAGTAAGGCGGCGGTTTACGGTGCATCTATCAGCGAGGAATAAGTTACAGCACAGCTCGTAGCAAACTATGATAACCATGAATAACACAGCGACAGCCAACACGCTGGGTGGAATCACATTCTCCGACCTGACCGGAGCCACCACAGCAACCGGACAGGGGCACGGGAGGCCTACAGCTGGTACAGCTCAGCCAAGTCATGCCCGACCAAAACTCGCAGCAACTGGTTTATGCAGAGTCTACAGCAGCAGCCTTCACTG]


>consensus_8153#3 CCGGTGCTATCGAAAATTCGCGATTTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAA CACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGTGAGG AGTTGTGAATCCCCCCGGGTGTAAAGCATAGGCGTTTTGTGTGTTGCGTATCCGTCGGGT AGCGTCGTCTCGTCATTCCTCGTACCGCGTGTAACGACGCCCGAAAAAGTGTGCACTTGT TTGTGGGGTTGTTCAATGTTTAGCCGTTTTTGTTGCGCTTCCGAAACGTGTTTCCCTATC GCGGCCTAGGCATTCTACTCAAAGACGCGTTTGACTACAACGACGACGAGTCGACGAGCG AGCAGTAAGGCGGCGGTTTACGGTGCATCTATCAGCGAGGAATAAGTTACAGCACAGCTC GTAGCAAACTATGATAACCATGAATAACACAGCGACAGCCAACACGCTGGGTGGAATCAC ATTCTCCGACCTGACCGGAGCCACCACAGCAACCGGACAGGGGCACGGGAGGCCTACAGC TGGTACAGCTCAGCCAAGTCATGCCCGACCAAAACTCGCAGCAACTGGTTTATGCAGAGT CTACAGCAGCAGCCTTCACTG



consensusID : consensus_8153#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 328
fasta sequence
                              [GGCCAAAGAAATTCGGCCGAGGTGNAGATAGTTGCTATCGAAAATTCGCGATTTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACATACGGAGCGCTCGTGTNCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGTCGATCGGATCGGTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGGCGACA]

[+] EMBL AL697019             [GGCCAAAGAAATTCGGCCGAGGTGNAGATAGTTGCTATCGAAAATTCGCGATTTTCAGGAGGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACATACGGAGCGCTCGTGTNCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGTCGATCGGATCGGTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGGTGTTTGGATATGCGCGAAACGGGCGACA]


>consensus_8153#4 GGCCAAAGAAATTCGGCCGAGGTGNAGATAGTTGCTATCGAAAATTCGCGATTTTCAGGA GGGAAAAATCGACATTTCGCTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCA CACGCCTCGACACGAAGAAAGTGAACTCGGAGCTGCTCACCCTGACATACGGAGCGCTCG TGTNCCAGATGCTGCGTGACTTCGAGAATGTCGATGACGTGAACAAGCAGTCGATCGGAT CGGTTCAACATGGGCATGCGGTTGATCGAGGACTTTCTGTCGCGCACCGGCTCCGGCCGG TGTTTGGATATGCGCGAAACGGGCGACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8153#0      ------------------------------------------------------------
consensus_8153#1      CGTAGGAAGTACACAGTTTTAAGGTTTAAGTGCTACGAACGAGTCGTAAAATGCAATAAA 60
consensus_8153#2      ---------------------------------------CCGGCCAAACTTGTCAAGCGG 21
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      ------------------------------------------------------------
consensus_8153#1      AACACGATAACATAGTTCACTCGAAAGCACCTTTCTTCTTTCTCGGTCTGCTGGCTTTCC 120
consensus_8153#2      ACGCTTGTGTTGAGGCTGTCATACACTGGGGGAAAAACATAAGCAAATTCTTGTTTTTCC 81
consensus_8153#4      ---------------------------------------GGCCAAAGAAATTCGGCCGAG 21
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      ------------------------------------------CCCCGAGGTTAAATTTCG 18
consensus_8153#1      CCGTGGGCCGGAGCTGTGCGGCGCTGTGGTTTGTTTTCGGAACTCCTTCCCATCATTTCC 180
consensus_8153#2      ATCGCTGATAGTGCTATCGAAAATTCGCGAT--TTTCAGGAGGGAAAAATCGACATTTCG 139
consensus_8153#4      GTGNAGATAGTTGCTATCGAAAATTCGCGAT--TTTCAGGAGGGAAAAATCGACATTTCG 79
consensus_8153#3      -------CCGGTGCTATCGAAAATTCGCGAT--TTTCAGGAGGGAAAAATCGACATTTCG 51
                                                                            ***** 

consensus_8153#0      CTAGACTAACACCATCAACCGGAACATGTCTCGCCAAAGCACACGC-CTCGACACGAAGA 77
consensus_8153#1      CCTTTTTCCTTTCCTTTCCTTGCATCTTTTCACTCACGACTCACCTGCTCTGTTCGCGTT 240
consensus_8153#2      CTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGC-CTCGACACGAAGA 198
consensus_8153#4      CTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGC-CTCGACACGAAGA 138
consensus_8153#3      CTAGACTAACACCATCAACCGGAAGATGTCTCGCCAAAGCACACGC-CTCGACACGAAGA 110
                      *     *     * *   *  * *  * *     **   * ***   ***    **    

consensus_8153#0      AAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTG 137
consensus_8153#1      TGCAGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTG 300
consensus_8153#2      AAGTGAACTCGGAGCTGCTCACCCTGACGTACGGGGCGCTCGTGTCCCAGATGCTGCGTG 258
consensus_8153#4      AAGTGAACTCGGAGCTGCTCACCCTGACATACGGAGCGCTCGTGTNCCAGATGCTGCGTG 198
consensus_8153#3      AAGTGTGAGGAGTTGTGAATCCCCCCGGGTGTAAAGCATAGGCGTTTTGTGTGTTGCGTA 170
                          *      *   **    ***     *     **    * **      ** ***** 

consensus_8153#0      ACT-TCGAG-AATGTCGATGACGTGAACAAGCAGCTCGATCTGGATCTGGCTTCAACATG 195
consensus_8153#1      ACT-TCGAG-AATGTCGATGACGTGAACAAGCAGCTCGATC-GGATC-GGCTTCAACATG 356
consensus_8153#2      ACT-TCGAG-AATGTCGATGACGTGAACAAGCAGCTCGATC-GGATC-GGCTTCAACATG 314
consensus_8153#4      ACT-TCGAG-AATGTCGATGACGTGAACAAGCAG-TCGATC-GGATC--GGTTCAACATG 252
consensus_8153#3      TCCGTCGGGTAGCGTCG-TCTCGTCATTCCTCGTACCGCGT-GTAAC-GACGCCCGAAAA 227
                       *  *** * *  **** *  *** *     *    **    * * *      *   *  

consensus_8153#0      GGCATGCGGTTGATCGAGGACTT-TCTGTCGCGCACCGGCTCCGGCCGGTGTTTTGGATA 254
consensus_8153#1      GGCATGCGGTTGATCGAGGACTT-TCTGTCGCGCACCGGCTCCGGCCGGTGTTT-GGATA 414
consensus_8153#2      GGCATGCGGTTGATCGAGGACTT-TCTGTCGCGCACCGGCTCCGGCCGGTGTTT-GGATA 372
consensus_8153#4      GGCATGCGGTTGATCGAGGACTT-TCTGTCGCGCACCGGCTCCGGCCGGTGTTT-GGATA 310
consensus_8153#3      AGTGTGCACTTGTTTGTGGGGTTGTTCAATGTTTAGCCGTTTTTGTTG-CGCTTCCGAAA 286
                       *  ***  *** * * **  ** *     *   * * * *   *  *  * **  ** *

consensus_8153#0      TGCGCGAAACGGCTGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGA 314
consensus_8153#1      TGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTCAACGTGCAGCCGA 474
consensus_8153#2      TGCGCGAAACGGCCGACAAAATACAGCTCGCCTTCCGGATGTACCTGAACGTGCAGCCGA 432
consensus_8153#4      TGCGCGAAACGGGCGACA------------------------------------------ 328
consensus_8153#3      CGTGTTTCCCTATCGCGGCCTAGGCATTCTACTCAAAGACGCGTTTGACTACAACGACGA 346
                       * *     *    *                                             

consensus_8153#0      CCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCT-TCGACACGAACCCA 373
consensus_8153#1      CCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCT-TCGACACGAACCCA 533
consensus_8153#2      CCATCTCGAACTGGGCCGCTTCGGCGGACGAATTTTCGCTCATCT-TCGACACGAACCCA 491
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      CGAGTCGACGAGCGAGCAGTAAGGCGG-CGGTTTACGGTGCATCTATCAGCGAGGAATAA 405
                                                                                  

consensus_8153#0      CTGACCG---AGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATC 430
consensus_8153#1      CTGACCG---AGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATC 590
consensus_8153#2      CTGACCG---AGTTTGTGGAGCTGCCGGCCGACTATCAGCAGCTACGGTACAGCTCGATC 548
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      GTTACAGCACAGCTCGTAGCAAACTATGATAACCATGAATAACACAGCGACAGC-CAACA 464
                                                                                  

consensus_8153#0      CTTTGCGG-TGCATCCTGGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTT 489
consensus_8153#1      CTTTGCGGCTGCATCC-GGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTT 649
consensus_8153#2      CTTTGCGGCTGCATCC-GGGGGGCTCTGGAGATGGTGCAGCTCGAAGTGCAGTGTTGGTT 607
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      CGCTG-GGTGGAATCA---CATTCTCCGACCTGACCGGAGCCACCACAGCAAC--CGGAC 518
                                                                                  

consensus_8153#0      ACAGCCAGGACCAGCTGAAGGGCGATGCAAC--GACGGAGATACGGGTGANACGCTATNG 547
consensus_8153#1      -CAGCCAGGACCAGCTGAAGGGCGATGCAAC--GACGGAGATACGGGTGAAG-----TTT 701
consensus_8153#2      -CAGCCAGGACCAGCTGAAGGGCGATGCAAC--GACGGAGATACGGGTGAAG-----TTT 659
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      AGGGGCACGGGAGGCCTACAGCTGGTACAGCTCAGCCAAGTCATGCCCGACC----AAAA 574
                                                                                  

consensus_8153#0      GTTCCGACGGCCTGGAGGGATGCAGTACCGGCCAGNGGCGAAGCACTTAATCATTCCCGC 607
consensus_8153#1      GTTC-GACGGCT--GGAGGATGCAGTACCGGCAGGGGAAGA-----TTAATCATTTTCG- 752
consensus_8153#2      GTTC-GACGGCT--GGAGGATGCAGTACCGGCAGGGGAAGA-----TTAATCATTTTCG- 710
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      CTCGCAGCAACT--GGTTTATGCAGAGTCTACAGCAGCAGC----CTTCACTG------- 621
                                                                                  

consensus_8153#0      ACGCCGGCANACCGACGTTNCTATCACTCGCATTCCGCTGCGCTATGCTGCGCGCTCCTA 667
consensus_8153#1      -----AGCGGAAAGACGTTTT--TCA-TCGCATTCCGTGCGGTTATGCTGCGCGTTCTAA 804
consensus_8153#2      -----AGCGGAAAGACGTTTT--TCA-TCGCATTCCGTGCGGTTATGCTGCGCGTTCTAA 762
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CNCACTCACTTGATCATCTCTCCTGCTTCAANGACAAC-ATAACAACCCACCACGCAATC 726
consensus_8153#1      ---AATCACTTGATATTCTCTGTTAAGAAAATAAAAACCACACGAATCC----------- 850
consensus_8153#2      ----ATCACTTGATATTCTCTGTTAAGA-AATAAAAACA--------------------- 796
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CCCNCACCACACACACACACCCCNACCACGCGCCATGTATGCGCGCCCGCAAGGCTTATT 786
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CCCCCTTCAACTGANGNCTNCACACCNNANCATTGNCACCTGGACCGTCCGCTCACCAAA 846
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CGTACTAACTGGGAAAAACCCCTGCGCGTATTACCCCCAAACTATAAANGGGCGANTTGT 906
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CAGGANAGAATTTCCCCCATTTACGGCCAAGCNTGACGCTAATACTAGCCGCACCAAGGG 966
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      ACCTGGCACCGCNAATTAGCCCTTNCCCACCAAATTCGTANCACACCCTGAATGTTGCNN 1026
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      AAACTGNACCCNCCCCTCNCNAACNGCGCNCACTANANCACCAGCCGGACTATAGTAGTA 1086
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      TCAGCCACNAACTTACCCCATACACTTGCACAGTCCCTATCGCACGACCCATNAACATAC 1146
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      AGNCATATCACATAGCATACCCCANCTACAACAGCCACTCTACACACATTATACTACNCC 1206
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      CCCAACATTAGTTTANTNCCACCNAAAGCACATGNNCAATTAATNTCACCCTAATTAAAN 1266
consensus_8153#1      ------------------------------------------------------------
consensus_8153#2      ------------------------------------------------------------
consensus_8153#4      ------------------------------------------------------------
consensus_8153#3      ------------------------------------------------------------
                                                                                  

consensus_8153#0      AATATTTACACCCCCACCAACACCCA 1292
consensus_8153#1      --------------------------
consensus_8153#2      --------------------------
consensus_8153#4      --------------------------
consensus_8153#3      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)