cluster # 8181

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Anopheles gambiae
cluster # 8181 cluster # 8181 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8181#0 length = 1123 sequences # 3
consensus_8181#1 length = 942 sequences # 3

consensus_8181#2 length = 799 sequences # 2
consensus_8181#3 length = 639 sequences # 1

consensusID : consensus_8181#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1123
fasta sequence

                              [GAATCGCCACGAGGTGTANATGTTGGAGCGGCCGCAACATGCCTGGTTTTTTTTTTCTTTTCCGGCGTG-CGAA-TTC-AACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCG-AACAGC-AACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGTGGAAAAA-CCACCCA-GATGCCACA-GTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGC-T-ATTACCGTCGCAAAGTGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGACAACTTCCTCAACGAGCGCAACCTAACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTCGACCTGCCGAGCAGCACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGGCTGTTTGCGAACATTGCCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCACTGAAGGCCCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCT-GCGCAACGTGACCGAAATCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAAGGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATACTTGCTGGAAGTATTCCGTTGCGTTA-CTAAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTGTTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGGAGGAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAAAATACATTCTTCATGAACTATTTACCAACAAAAAAAAAAAAAA]

[+] EMBL BX466154             [GAATCGCCACGAGGTGTANATGTTGGAGCGGCCGCAACATGCCTGGTTTTTTTTTTCTTTTCCGGCGTGCCGAACTTC AACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCGAAACAGCTAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCNGGGTGAGACGGGCAGCGGAAAAAGCCACCCAGGATGCCACAGGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCGTAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08VCH             [                                                     tggaTTTTCTTTCGTG CGAA TTCGGACCAGAAAAAGTAATTAGAAAAGCCCGGCCGAAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGCCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCG AAGAGC AACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGTGGAAAAA CCACCCA GATGCCACA GTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGC T ATTACCGTCGCAAAGTGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGACAACTTCCTCAACGAGCGCAACCTAACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTCGACCTGCCGAGCAGCACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGGCTGTTTGCGAACATTGCCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCACTGAAGGCCCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCT GCGCAACGTGACCGAAATCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAAGGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATACTTGCTGGAAGTATTCCGTTGCGTTA CTAAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTGTTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGGAGGAAAAAAAACAATCATCACGTGGCAT                                                        ]
[-] EMBL CNS08VCI             [                                                                                                                                                                                                              CCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAAACGGGCAGTGGAAAAA CCACCCA GATGCCACA GTTCATCTACGAGGCGGGACTGAACGGGGACAAAATTATTGCCTTCACGCAACCGCGCCGAGTGGCCGC T ATTACCGTCGCAAAGTGGGTCGCGCAGGAAATGGGCACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGACAACTTCCTCAACGAGCGCAACCTAACGCACGTGGCCTCGATCCGGGGGCAGCTGAGCGAAATTTGCAAAGCGCTCGACCTGCCGAGCAGCACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGGCTGTTTGCGAAAATTGCCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCACTGAAGGCCCGCAAACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTCGCGCAACGTGACCGAAATCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAAGGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATACTTGCTGGAAGTATTCCGTTGCGTTAGCT AACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTGTTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGGAGGAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAAAATACATTCTTCATGAACTATTTACCAACAAAAAAAAAAAAAA]




>consensus_8181#0
GAATCGCCACGAGGTGTANATGTTGGAGCGGCCGCAACATGCCTGGTTTTTTTTTTCTTT
TCCGGCGTGCGAATTCAACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATT
CCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGC
AGGAGCAGGCGAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGAT
GGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGTGGAAAAAC
CACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCAT
CACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCAAAGTGGGTCGCGCAGGAGATGGG
CACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGACAACTTCCTCAACGAGCG
CAACCTAACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTCGA
CCTGCCGAGCAGCACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGG
GCTGTTTGCGAACATTGCCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGC
ACTGAAGGCCCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGT
CGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAACGTGACCGAAATCGA
TCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAA
GGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATACTTGCTGGAAGTATTCCGTT
GCGTTACTAAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTGTTGCGTGTGCC
CCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTG
AACTAAGTGTAAAATTTGGAGGAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAA
AATACATTCTTCATGAACTATTTACCAACAAAAAAAAAAAAAA

consensusID : consensus_8181#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 942
fasta sequence

                              [TTGTTTTGGACTCGGTGCGGGTTGTTTATTTTCCGGCGTGCCGAACTTC-AACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCGAAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGCGGAAAAACCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCGAAATGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTTGGCTATACGGTGCGCTTCGAGGACATGACGTCGGAAAACACGCAGGTTAAGTACATGACCGATGGTATACTGTGCCGGGAGGCGCTGTCCGATCGGCAGCTGCGCAACTACAACGTGATCATACTGGACGAGGTGCACGAACGGACCATCGCGACGGATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTTTTCCGACTGTCCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGATGGTGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACCAAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCACAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACCTGCCAAAGCTTGCCGTTCATCCAATGTACG]

[+] EMBL CNS08TO2             [TTGTTTTGGACTCGGTGCGGGTTGTTTATTTTCCGGCGTGCCGAACTTC AACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCGAAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGCGGAAAAACCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCGAAATGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTTGGCTATACGGTGCGCTTCGAGGACATGACGTCGGAAAACACGCAGGTTAAGTACATGACCGATGGTATACTGTGCCGGGAGGCGCTGTCCGATCGGCAGCTGCGCAACTACAACGTGATCATACTGGACGAGGTGCACGAACGGACCATCGCGACGGATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTTTTCCGACTGTCCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGATGGTGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACCAAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCACAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACCTGCCAAAGCTTGCCGTTCATCCAATGTACG]
[+] EMBL CNS08VMB             [             GGTGCGGGTTGTTTATTTTCCGGCGTGCCGAACTTC AACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCGAAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGCGGAAAAACCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCGAAATGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTTGGCTATACGGTGCGCTTCGAGGACATGACGTCGGAAAACACGCAGGTTAAGTACATGACCGATGGTATACTGTGCCGGGAGGCGCTGTCCGATCGGCAGCTGCGCAACTACAACGTGATCATACTGGACGAGGTGCACGAACGGACC TCGCGACGGATGTGCTGCTG                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM608555             [                      ccgTTATTTTCCGGCGTGCCGAA TTCGGACCAGAAAAAGTAATTAGAAAAGCCCGGCCGAAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGCAGGATCAGGCGAAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGTGGAAAAACCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCAAAGTGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGAGGACATGACGTCGGAAAACACGCAGGTTAAGTACATGACCGATGGTATTCTGTGCCGGGAGGCGCTGTCCGATCGGCAGCTGCGCAACTACAACGTGATCATACTGGACGAGGTGCATGAACGGACCATCGCGACGGATGTGCTGCTGGGAGTGGTGAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCCGCTGAAGGTGATCATCATGTCGGC                                                                                                                                                                                                                                                                                            ]




>consensus_8181#1
TTGTTTTGGACTCGGTGCGGGTTGTTTATTTTCCGGCGTGCCGAACTTCAACCAGTAAAA
TTAATTAGAAAAGCCCGGCCGTAACGATGGATTCCGGACTTTCGAGTCGCAACAGCAGTC
TGGGCAATCAATACTCACGCTCCTACATGAAGCAGGAGCAGGCGAAACAGCAACGCCTGT
CGTTGCCCATCTACTCGGTGCGCAAATCGCTGATGGAAATGGTGCGAAAGTCGTCCACGA
TCATCGTGCTGGGTGAGACGGGCAGCGGAAAAACCACCCAGATGCCACAGTTCATCTACG
AGGCGGGACTGAACGGGGACAAAATGATTGCCATCACGCAACCGCGCCGAGTGGCCGCTA
TTACCGTCGCGAAATGGGTCGCGCAGGAGATGGGCACCAATCTGGGCGATTTGGTTGGCT
ATACGGTGCGCTTCGAGGACATGACGTCGGAAAACACGCAGGTTAAGTACATGACCGATG
GTATACTGTGCCGGGAGGCGCTGTCCGATCGGCAGCTGCGCAACTACAACGTGATCATAC
TGGACGAGGTGCACGAACGGACCATCGCGACGGATGTGCTGCTGGGAGTGGTAAAGAAAG
CGCAACAGATACGAGCCCTCAAGCGCATGACGCCGTTGAAGGTGATCATCATGTCGGCCA
CCATGGACTGTGACCATTTTGCGAGCTACTTTTCCGACTGTCCGATCGTATACCTGCAAG
GCCGCACGTACCAGGTGAAGGTGTACCAGATGGTGGAGAAAATGCATTACATCGAGGCGT
GTTTGAAGACGGTGGTAGAGATCCACCAAACGCAACCGGCCGGCGATGTGCTGGTGTTCC
TAACCGGTCAAGAAGAAATAGAAGCCACAGTTGGCAAGATGCGACGCTTGGCTAAGAGCT
TCTCGCCCGACCTGCCAAAGCTTGCCGTTCATCCAATGTACG

consensusID : consensus_8181#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 799
fasta sequence

                              [ATGCTGTCGGGCGAGAACGTCTTTACCAACAGTGTGGACAAGCGTGAACAGATGCTGATCGCACACTCCAAGTTTTTCGACCGCTCGGGCGACCACATCACGCTGCTGAACGTGTTCAACGAGTTTAAGACGCGGGCCAAACCGAAGGTCTGGTGCTTCGACAACTTCCTCAACGAGCGCAACCTCACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTTGACCTGCCGAGCAGAACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGGCTGTTTGCGAACATTACCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCACTGAAGGCCGCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAAGCGTGACCGAAATCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAAGCGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATAC-TTGCTGGAAGTATTCCGTTGCGTTAGCTAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTTGTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGAAGAAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAAAATACATTCTTCCTGAA]

[-] EMBL CNS08TO3             [ATGCTGTCGGGCGAGAACGTCTTTACCAACAGTGTGGACAAGCGTGAACAGATGCTGATCGCACACTCCAAGTTTTTCGACCGCTCGGGCGACCACATCACGCTGCTGAACGTGTTCAACGAGTTTAAGACGCGGGCCAAACCGAAGGTCTGGTGCTTCGACAACTTCCTCAACGAGCGCAACCTCACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTTGACCTGCCGAGCAGAACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGGCTGTTTGCGAACATTACCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCACTGAAGGCCGCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAAGCGTGACCGAAATCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCAAGCGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATAC TTGCTGGAAGTATTCCGTTGCGTTAGCTAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTTGTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGAAGAAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAAAATACATTCTTCCTGAA]
[-] EMBL CNS08VMC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCCAATCGCACAAATGAATACATTGCTGGAAGTATTCCGTTGCGTTAGCTAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTTGTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGAAGAAAAAAAAACAATCATCACGTGGCATTTCTCATTTGTAAA                ]




>consensus_8181#2
ATGCTGTCGGGCGAGAACGTCTTTACCAACAGTGTGGACAAGCGTGAACAGATGCTGATC
GCACACTCCAAGTTTTTCGACCGCTCGGGCGACCACATCACGCTGCTGAACGTGTTCAAC
GAGTTTAAGACGCGGGCCAAACCGAAGGTCTGGTGCTTCGACAACTTCCTCAACGAGCGC
AACCTCACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTTGAC
CTGCCGAGCAGAACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACCGGG
CTGTTTGCGAACATTACCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGCGCA
CTGAAGGCCGCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGTCGT
CGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAAGCGTGACCGAAATCG
ATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGAGCCAGTACCAGACGAAGGGCTTCA
AGCGAGAACCACTTCCGGGCGTTCCAATCGCACAAATGAATACTTGCTGGAAGTATTCCG
TTGCGTTAGCTAACTAATTTTCCTAGCGATTAAGTGGGGAAGCGGCGAGTTGTGCGTGTG
CCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACGTCCGTTGCTTAGT
TGAACTAAGTGTAAAATTTGAAGAAAAAAAAACAATCATCACGTGGCATTTCTCATTTGT
AAAATACATTCTTCCTGAA

consensusID : consensus_8181#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence

                              [CACCTCGTCCAGTATGATCACGTTGTAGTTGCGCAGCTGCCGATCGGACAGCGCGACGGATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTTTTCCGACTGTCCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGATGGTGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACCAAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCACAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACTTGCCAAAGCTTGCCGTTCATCCAATGTACGCCGCGCTGCCACAGAACCAACAGTTGGACGTGTTCAACGCTGCGCCGGGTAACGTGCGGAAGGTAATATTTGCGACCAACATTGCCGAAACGTCCATTACGATCAACGGCATCCGGTATGTGGTGGATTGTGGCCGCGCGAAGGTACGCTCGTACGATCCCATCACGGGGATGGACATGCTGAAGGTGTCCTGGATATCGCAGGCGCAAGC]

[+] EMBL BX606755             [CACCTCGTCCAGTATGATCACGTTGTAGTTGCGCAGCTGCCGATCGGACAGCGCGACGGATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTTTTCCGACTGTCCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGATGGTGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACCAAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCACAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACTTGCCAAAGCTTGCCGTTCATCCAATGTACGCCGCGCTGCCACAGAACCAACAGTTGGACGTGTTCAACGCTGCGCCGGGTAACGTGCGGAAGGTAATATTTGCGACCAACATTGCCGAAACGTCCATTACGATCAACGGCATCCGGTATGTGGTGGATTGTGGCCGCGCGAAGGTACGCTCGTACGATCCCATCACGGGGATGGACATGCTGAAGGTGTCCTGGATATCGCAGGCGCAAGC]




>consensus_8181#3
CACCTCGTCCAGTATGATCACGTTGTAGTTGCGCAGCTGCCGATCGGACAGCGCGACGGA
TGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAGATACGAGCCCTCAAGCGCATGACGCC
GTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTTTTC
CGACTGTCCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGATGGT
GGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACCAAACGCA
ACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCACAGTTGG
CAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACTTGCCAAAGCTTGCCGTTCATCC
AATGTACGCCGCGCTGCCACAGAACCAACAGTTGGACGTGTTCAACGCTGCGCCGGGTAA
CGTGCGGAAGGTAATATTTGCGACCAACATTGCCGAAACGTCCATTACGATCAACGGCAT
CCGGTATGTGGTGGATTGTGGCCGCGCGAAGGTACGCTCGTACGATCCCATCACGGGGAT
GGACATGCTGAAGGTGTCCTGGATATCGCAGGCGCAAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8181#1      ---------------------------TTGTTTTGGACTCGGTGCGGGTTGTTTATTTTC 33
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      GAATCGCCACGAGGTGTANATGTTGGAGCGGCCGCAACATGCCTGGTTTTTTTTTTCTTT 60
consensus_8181#2      ------------------------------------------------------------
                                                                                  

consensus_8181#1      CGGCGTGCCGAACTTCAACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATT 93
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      TCCGGCGTGCGAATTCAACCAGTAAAATTAATTAGAAAAGCCCGGCCGTAACGATGGATT 120
consensus_8181#2      ------------------------------------------------------------
                                                                                  

consensus_8181#1      CCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGC 153
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      CCGGACTTTCGAGTCGCAACAGCAGTCTGGGCAATCAATACTCACGCTCCTACATGAAGC 180
consensus_8181#2      ------------------------------------------------------------
                                                                                  

consensus_8181#1      AGGAGCAGGCGAAACAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGA 213
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      AGGAGCAGGCGAA-CAGCAACGCCTGTCGTTGCCCATCTACTCGGTGCGCAAATCGCTGA 239
consensus_8181#2      ------------------------------------------------------------
                                                                                  

consensus_8181#1      TGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGCGGAAAAA 273
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      TGGAAATGGTGCGAAAGTCGTCCACGATCATCGTGCTGGGTGAGACGGGCAGTGGAAAAA 299
consensus_8181#2      ------------------------------------------ATGCTGTCGGGCGAGAA- 17
                                                                                  

consensus_8181#1      CCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCA 333
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      CCACCCAGATGCCACAGTTCATCTACGAGGCGGGACTGAACGGGGACAAAATGATTGCCA 359
consensus_8181#2      -CGTCTTTAC-CAACAGT--GTGGACAAG-CGTGAACAGATGCTGATCGCACACTCCAAG 72
                                                                                  

consensus_8181#1      TCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCGAAATGGGTCGCGCAGGAGATGG 393
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      TCACGCAACCGCGCCGAGTGGCCGCTATTACCGTCGCAAAGTGGGTCGCGCAGGAGATGG 419
consensus_8181#2      TTTTTCGACCGC-TCGGGCGACCAC-ATCAC-GCTGCTGAACGTGTTCAACGAGTTTAAG 129
                                                                                  

consensus_8181#1      GCACCAATCTGGGCGATTTGGTTGGCTATACGGTGCGCTTCGAGGACATGACGTCGGAAA 453
consensus_8181#3      ------------------------------------------------------------
consensus_8181#0      GCACCAATCTGGGCGATTTGGTGGGGTACACGGTGCGCTTCGACAACTTCCTCAACGAGC 479
consensus_8181#2      ACGCGGGCCAAACCGA--AGGTCTGGT---------GCTTCGACAACTTCCTCAACGAGC 178
                                                                                  

consensus_8181#1      ACACGCAGGTTAAGTACATGACCGATGGTATACTGTGCCGGGAGGCGCTGTCCGATCGGC 513
consensus_8181#3      -----------------------------------------------------------C 1
consensus_8181#0      GCA-ACCTAACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTC 538
consensus_8181#2      GCA-ACCTCACGCACGTGGCCTCGATCCGGGAGCAGCTGAGCGAAATTTGCAAAGCGCTT 237
                                                                                  

consensus_8181#1      AGCTGCGCAACTACAACGTGATCATACTGGACGAGGTGCACGAACGGACCATCGC-GACG 572
consensus_8181#3      ACCTCGTCCAGTATGATCACGTTGTAGTTGCGCAGCTGC-CGATCGGAC-AGCGC-GACG 58
consensus_8181#0      GACCTGCCGAGCAGCACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACC 598
consensus_8181#2      GACCTGCCGAGCAGAACGTGCGGGAAGGATACGACCCCCGTCGCCAAGTGTTTGCTGACC 297
                        *    * *  *  *         *       *    *     *        ** *** 

consensus_8181#1      GATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAG-ATACGAGCCCTCAAGCGCATGAC 631
consensus_8181#3      GATGTGCTGCTGGGAGTGGTAAAGAAAGCGCAACAG-ATACGAGCCCTCAAGCGCATGAC 117
consensus_8181#0      GGGCTGTTTGCGAACATTGCCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGC 658
consensus_8181#2      GGGCTGTTTGCGAACATTACCACGAAGCAGCCGGACCACCTGTACCTTACCTCGACCAGC 357
                      *   ** *   *    *    * ***   **   *  *   *  ** *    **     *

consensus_8181#1      GCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTT 691
consensus_8181#3      GCCGTTGAAGGTGATCATCATGTCGGCCACCATGGACTGTGACCATTTTGCGAGCTACTT 177
consensus_8181#0      GCACTGAAGGCC-CGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGT 717
consensus_8181#2      GCACTGAAGGCCGCGCATACATCCGTCCAGCGCGGTGTGCGGGAAATTCCGGCCCCCGGT 417
                      **  *  * *     ***     ** *** *  **  ** *   * **   *  *    *

consensus_8181#1      TTCCGACTGT-CCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGA 750
consensus_8181#3      TTCCGACTGT-CCGATCGTATACCTGCAAGGCCGCACGTACCAGGTGAAGGTGTACCAGA 236
consensus_8181#0      CGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAA-CGTGACCGAAA 776
consensus_8181#2      CGTCGTCTACACCGAGCTGGTGGCGACGCGACTCAACTATCTGCGCAAGCGTGACCGAAA 477
                         ** **   **** *   *  *  *  * *   **   *   *  *  ***  * * *

consensus_8181#1      TGG---TGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACC 807
consensus_8181#3      TGG---TGGAGAAAATGCATTACATCGAGGCGTGTTTGAAGACGGTGGTAGAGATCCACC 293
consensus_8181#0      TCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGA-GCCAGTACCAGA---CGAAG 832
consensus_8181#2      TCGATCCGGCGTGGATCGATGAGGTGGTGCCGAACGTGA-GCCAGTACCAGA---CGAAG 533
                      * *    ** *   **  ** *  * * * **    *** * * **   ***   * *  

consensus_8181#1      AAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCA 867
consensus_8181#3      AAACGCAACCGGCCGGCGATGTGCTGGTGTTCCTAACCGGTCAAGAAGAAATAGAAGCCA 353
consensus_8181#0      GGCTTCAAG-GAG-AACCACTTCCGGGCGTTCC-AATCG--CACAAATGAATACTTGCTG 887
consensus_8181#2      GGCTTCAAGCGAG-AACCACTTCCGGGCGTTCC-AATCG--CACAAATGAATACTTGCTG 589
                           ***  *     * *  * * ** ***** ** **  **  **  ****   **  

consensus_8181#1      CAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACCTGCCAAAGCTTGCCG 927
consensus_8181#3      CAGTTGGCAAGATGCGACGCTTGGCTAAGAGCTTCTCGCCCGACTTGCCAAAGCTTGCCG 413
consensus_8181#0      GAAGTATTCCGTTGCGTTACTAAACTAA--TTTTCCTAGCGATTAAGTGGGGAAGCGGCG 945
consensus_8181#2      GAAGTATTCCGTTGCGTTAGCTAACTAA--TTTTCCTAGCGATTAAGTGGGGAAGCGGCG 647
                       *  *     * ****        ****    ***    *      *         * **

consensus_8181#1      TTCATCCAATGTACG--------------------------------------------- 942
consensus_8181#3      TTCATCCAATGTACGCCGCGCTGCCACAGAACCAACAGTTGGACGTGTTCAACGCTGCGC 473
consensus_8181#0      AGTGTTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACG 1005
consensus_8181#2      AGTTGTGCGTGTGCCCCATCATCGCACGCGCGCAATCTTTCAACGAATGTTTTGGAAACG 707
                               *** *                                              

consensus_8181#1      ------------------------------------------------------------
consensus_8181#3      CGGGTAACGTGCGGAAGGTAATATTTGCGACCAACATTGCCGAAACGTCCATTACGATCA 533
consensus_8181#0      TCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGGAGGAAAAAAAACAATCATCACG---- 1061
consensus_8181#2      TCCGTTGCTTAGTTGAACTAAGTGTAAAATTTGAAGAAAAAAAAACAATCATCACG---- 763
                                                                                  

consensus_8181#1      ------------------------------------------------------------
consensus_8181#3      ACGGCATCCGGTATGTGGTGGATTGTGGCCGCGCGAAGGTACGCTCGTACGATCCCATCA 593
consensus_8181#0      -TGGCATTTCTCATTTGTAAAATACATTCTTCATGAACTATTTACCAACAAAAAAAAAAA 1120
consensus_8181#2      -TGGCATTTCTCATTTGTAAAATACATTCTTCCTGAA----------------------- 799
                                                                                  

consensus_8181#1      ----------------------------------------------
consensus_8181#3      CGGGGATGGACATGCTGAAGGTGTCCTGGATATCGCAGGCGCAAGC 639
consensus_8181#0      AAA------------------------------------------- 1123
consensus_8181#2      ----------------------------------------------