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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8313#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1921 fasta sequence
[AGCAGCAGCAGCTCGTCATTACCAGGGGTTTCAGTTGACATCGGGCTACCGTACGGTGCGGATCGTTCCCCCTTCTATTTGGTGAAAGCAACTCTACTCCAAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCTGTGCACGACGAGCATCTGTTCATCGTAACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGAACAAGCTCGGCGTAAAGTCGGAACACCGCGTCAAGTACAATCAGAAGTACACGGAGGTGTTTGCCAGCGATCCGGGCGCGATCGAGCGGATCGGTACGACTGAGACGGAACCGTCGCTGGCCGATCTGGTGCAGAAGTGGTTGGAGCGTACGCCCGGGCTGGAGCAGGATGGGTTTAACTTCTGGGGCAAGTTTCAGGAGAGCGTCGAGCAGCTGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTGCACGATGCGCTGGTGGCGCGCGGTGAGCGTCGCTTCACGCATAAGGCGCTGCAGGGTGCGATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTAATGCTGCTAATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCCGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCAACAACCCTCAATG-CCCCAGCACCTCCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTCATTGTCGGATAATGGGTTGCCGGTAATCTCGTTGCGGTAATATCATATTGCAACCTGTCACCCGTGTATGATATAAGGCGACCGTTTTCGGTGCAAATTGAGAGCATCCAAGATGGCCTTTCTCTGTTTGCCGGGGAGTTTTGTTTTGTTTTTTTTTTTTTTTTTTGCACAGATAAGATAAACATCAAGGTTAAAGAGGGATCGCGGTGGCTCGTGGCAAACTGTGCAAATAGACACCCATAAACATGCTTCTATTTTGCATACCTTCAGCAGGGGTGGATTTTGTTGTTTGTTGGGCGCAGAAGAAACATGCTAAATAAAATATACTAATTATAAGCACAAGAAGAAACATAGGATGCAAATAGGTGTATTGAAACACTAACGACGGGAAGCAGGAGAAGCCCTGCACGTTTGGGCAGACACCATTAATCAGAGCAGCGATCGGCGTTGGAATTTTGAGACGCTACAGCAACAGAATCAATAAAGAAGTCG]
[+] EMBL L76432 [AGCAGCAGCAGCTCGTCATTACCAGGGGTTTCAGTTGACATCGGGCTACCGTACGGTGCGGATCGTTCCCCCTTCTATTTGGTGAAAGCAACTCTACTCCAAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCTGTGCACGACGAGCATCTGTTCATCGTAACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGAACAAGCTCGGCGTAAAGTCGGAACACCGCGTCAAGTACAATCAGAAGTACACGGAGGTGTTTGCCAGCGATCCGGGCGCGATCGAGCGGATCGGTACGACTGAGACGGAACCGTCGCTGGCCGATCTGGTGCAGAAGTGGTTGGAGCGTACGCCCGGGCTGGAGCAGGATGGGTTTAACTTCTGGGGCAAGTTTCAGGAGAGCGTCGAGCAGCTGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTGCACGATGCGCTGGTGGCGCGCGGTGAGCGTCGCTTCACGCATAAGGCGCTGCAGGGTGCGATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTAATGCTGCTAATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGCGGCTCTTCCGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCCACAACCCTCAATG CCCCAGCACCTCCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTCATTGTCGGATAATGGGTTGCCGGTAATCTCGTTGCGGTAATATCATATTGCAACCTGTCACCCGTGTATGATATAAGGCGACCGTTTTCGGTGCAAATTGAGAGCATCCAAGATGGCCTTTCTCTGTTTGCCGGGGAGTTTTGTTTTGTTTTTTTTTTTTTTTTTTGCACAGATAAGATAAACATCAAGGTTAAAGAGGGATCGCGGTGGCTCGTGGCAAACTGTGCAAATAGACACCCATAAACATGCTTCTATTTTGCATACCTTCAGCAGGGGTGGATTTTGTTGTTTGTTGGGCGCAGAAGAAACATGCTAAATAAAATATACTAATTATAAGCACAAGAAGAAACATAGGATGCAAATAGGTGTATTGAAACACTAACGACGGGAAGCAGGAGAAGCCCTGCACGTTTGGGCAGACACCATTAATCAGAGCAGCGATCGGCGTTGGAATTTTGAGACGCTACAGCAACAGAATCAATAAAGAAGTCG]
[+] EMBL BM615773 [ ccgCCGTACGGTGCGGATCGTTCCCCCTTCTTTTTGGTGAAAGCAACTCTACTCTCAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGATCGGAGGCTGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCCGTGCACGACGAGCATCTGTTCATCGTGACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAAGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACAGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGAACAAGCTCGGCGTAAAGTCGGAACACCGCGTCAAGTACAACCAGAAGTACACGGAGGTGTTTGCCAGCGATCCGGGCGCGATCGAGCGGATCGGTACCACCGAGACGGAACCGTCGCTGGCCGATCTGGTGCAGAAGTGG ]
[+] EMBL BX602117 [ CGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTGCACGATGCGCTGGTGGCGCGCGGTGAGCGTCGCTTCACGCATAAGGCGCTGCAGGGTGCGATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTAATGCTGCTAATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTCGGCACCGGTGGCTCTTCCGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCTACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAAGCTAGATCGGGGAAAACACAGCAACAACCCTCAATG CCCCAGCACCTCCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTCATTGTCGGATAATGGGTTGCCGGTAATCTCGTTGCGGTAATATCATATTGCAACCTGTCACC ]
[+] EMBL BX617395 [ TCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTTCACGATGCGCTGGTGGCCCGCGGTGAGCGTCGCTTCACGCACAAGGCGCTGCAGGGTGCGATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTAATGCTACTGATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCAACAACCCTCAATGCCCCCAGCACCGTCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTTATTGTCGGATAATGGG ]
[+] EMBL BX623167 [ TTGACGCGCAGGTTCACGATGCGCTGGTGGCCCGCGGTGAGCGTCGCTTCACGCACAAGGCGCTGCAGGGTGCGATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTNATGCTACTGATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCAACAACCCTCAATGCCCCCAGCACCGTCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTTATTGTCGGATAATGGGTTGCCGGTAATCTCGTTTCGGTAATATCATATTGCAACCTGTCACCCGTGTATGATATAAGGCGACCGTTTTCGGTGCAAATTGAGAGCATCCAAGATGGNCTTTCTCTGTTTGC ]
consensusID : consensus_8313#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 818 fasta sequence
[CAGAATCGCCCGAGGATACGTTCTATCGCGACGAGCCACGGGTTTAGCCAGCCGCACCAGCTGCTAATGCTACTGATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGGTATCAGGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCACAGTCGATACCACGGGTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGAGCGGCACCACTTACGCACGCAACGGTCACGNATAGCACTAAATACTAGATACGGGGAAAACACAGCAAACAAGCCTCGAATNGCCCCAGCNACCGTCGAAGTTAATANCATANATACACCGGAGCGGGAAGCTGAGTACATCGTCGGGAGTANAGTTGGGCGTTNGGCCCCGGGGGCTAAATACTACCGGTANTAGGACGAGGGATAACAAGTTAATTCCACAGTANATTTTGGGCACANAACCCCCTGGCGTACAAACACCCCCCGGGCTGGNGTAACATTGGAAAGAATNACTTTACAAGTGGGAGAGAAAGCNCGCNGATGANGAATGCCNGGCGGTATGGCCCACAAAACTTTGGGACAGNNNAGGACCAGATTNCCAAANATNAAAAATCNGGGTGACATAGTANACCATCACCTAGGGANCTTTGCGCCNCGGGGCGGAAAGCAANTGCACTACAGCNTGCTGAGCTAGGTCAAGCCCACGANNATGA]
[+] EMBL AL934623 [CAGAATCGCCCGAGGATACGTTCTATCGCGACGAGCCACGGGTTTAGCCAGCCGCACCAGCTGCTAATGCTACTGATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGGTATCAGGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCACAGTCGATACCACGGGTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGAGCGGCACCACTTACGCACGCAACGGTCACGNATAGCACTAAATACTAGATACGGGGAAAACACAGCAAACAAGCCTCGAATNGCCCCAGCNACCGTCGAAGTTAATANCATANATACACCGGAGCGGGAAGCTGAGTACATCGTCGGGAGTANAGTTGGGCGTTNGGCCCCGGGGGCTAAATACTACCGGTANTAGGACGAGGGATAACAAGTTAATTCCACAGTANATTTTGGGCACANAACCCCCTGGCGTACAAACACCCCCCGGGCTGGNGTAACATTGGAAAGAATNACTTTACAAGTGGGAGAGAAAGCNCGCNGATGANGAATGCCNGGCGGTATGGCCCACAAAACTTTGGGACAGNNNAGGACCAGATTNCCAAANATNAAAAATCNGGGTGACATAGTANACCATCACCTAGGGANCTTTGCGCCNCGGGGCGGAAAGCAANTGCACTACAGCNTGCTGAGCTAGGTCAAGCCCACGANNATGA]
consensusID : consensus_8313#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence
[CCGCTTTCTCCGAAGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTGTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGAACAAGCTCGGCGTAAAGTCGGAACACCGCGTCAAGTACAACCAGAAGTACACGGAAGTGTTTGCCAGCGATCCGGGCGCGATCGAGCGGATCGGTACCACCGAGACGGAACCGTCGCTGGCCGATCTGGTGCAGAAGTGGCTGGAGCGTACGCCCGGGCTGGAGCAGGATGGGTTTAACTTCTGGGGCAAGTTTCAGGAGAGCGTCGAGCAGCTGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTGCACGAA]
[+] EMBL BM585098 [CCGCTTTCTCCGAAGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTGTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGAACAAGCTCGGCGTAAAGTCGGAACACCGCGTCAAGTACAACCAGAAGTACACGGAAGTGTTTGCCAGCGATCCGGGCGCGATCGAGCGGATCGGTACCACCGAGACGGAACCGTCGCTGGCCGATCTGGTGCAGAAGTGGCTGGAGCGTACGCCCGGGCTGGAGCAGGATGGGTTTAACTTCTGGGGCAAGTTTCAGGAGAGCGTCGAGCAGCTGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATCGGCTGATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGTGCACGAA]
consensusID : consensus_8313#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGTTCCCCCTTCTATTTGGTGAAAGCAACTCTACTCCCAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCGGTGCACGACGAGCATCTGTTCATCGTGACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGA]
[+] EMBL BM615365 [CCGCGGACGCGTGGGCGGACGCGTGGGCGTTCCCCCTTCTATTTGGTGAAAGCAACTCTACTCCCAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCGGTGCACGACGAGCATCTGTTCATCGTGACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCGGCTGCTGGAGA]
consensusID : consensus_8313#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence
[AATCGCCCGAGGTCCAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATACAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCCGTGCACGACGAGCATCTGTTCATCGTGACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGC]
[+] EMBL AL934704 [AATCGCCCGAGGTCCAAACTAAAACCTTCCAAGTGTTAGAAGTCGGCGTGTGACGTGAAATACAGAATACAATCCTTTCCACAATGAGCTGCCCAATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGGCATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCCGTGCACGACGAGCATCTGTTCATCGTGACGCATCAGGCGTACGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGATGATTCTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGTCGACTTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCCGGC]
consensusID : consensus_8313#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[AGATCGGCACGAGGTNTGATTCGCTGATCACCAAGTGGCGACTATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCAACAACCCTCAATGCCCCCAGCACCGTCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTTATTGTCGGATAATGGGTTGCCGGTCATCTCGTTGCGGTAATATCATATTGCAACCTGTCACCCGTGTATGATATAAGGC]
[+] EMBL BX469612 [AGATCGGCACGAGGTNTGATTCGCTGATCACCAAGTGGCGACTATAACCACGTCATTATGGTGCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGATATCAGTACTTACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTTCCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCTCGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGGGAAAACACAGCAACAACCCTCAATGCCCCCAGCACCGTCAAGTCTTCTTTCACCGAGCGGCAAGCTAGTTTATTGTCGGATAATGGGTTGCCGGTCATCTCGTTGCGGTAATATCATATTGCAACCTGTCACCCGTGTATGATATAAGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 AGCAGCAGCAGCTCGTCATTACCAGGGGTTTCAGTTGACATCGGGCTACCGTACGGTGCG 60
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GATCGTTCCCCCTTCTATTTGGTGAAAGCAACTCTACTCCAAAACTAAAACCTTCCAAGT 120
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GTTAGAAGTCGGCGTGTGACGTGAAATATAGAATACAATCCTTTCCACAATGAGCTGCCC 180
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 AATGAGAAGTGGTTTTGTCGATTCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCGGG 240
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 CATGCTGTACGGCGAGTACCTGATGCTGGACAAGGTGCTCAGTGCGCAGCGCATGCTGTC 300
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 -------------------------------------------------CCGCGGACGCG 11
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 -----------------------------------------CCGCTTTCTCCGAAGCGTA 19
consensus_8313#0 CGTCGAGGGCAAGAAGCCTGTGCACGACGAGCATCTGTTCATCGTAACGCATCAGGCGTA 360
consensus_8313#1 -------------------------------------------------------CAGAA 5
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 TGGGCGGACGCGTGGGCGTTCCCCCTTCTATTTGG-------TGAAAGCAACTCTACTCC 64
consensus_8313#4 ----------------------------------------------AATCGCCCGAGGTC 14
consensus_8313#2 CGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCAC 79
consensus_8313#0 CGAGCTGTGGTTCAAGCAGATCATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCAC 420
consensus_8313#1 TCGCCCGAGGATACGTTCTATCGCGACGAGCCACGGGTTTAGCCAGCCGCACCAGCTGCT 65
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 CAAAC----TAAAACCTTCCAAGTGTTAGAAGTCG----GCGTGTGACGTGAAATATA-- 114
consensus_8313#4 CAAAC----TAAAACCTTCCAAGTGTTAGAAGTCG----GCGTGTGACGTGAAATACA-- 64
consensus_8313#2 CGAGCACATCGAGGAGTCGCGTACGCTCGAGATTGTGAAGCGTCTCAACCGGATTGTGAT 139
consensus_8313#0 CGAGCACATCGAGGAGTCGCGTACGCTCGAGATTCTGAAGCGTCTCAACCGGATTGTGAT 480
consensus_8313#1 AATGCTACTGATGGACATCGATTCGCTGATCACCA---AGTG-GCGA-TATAACCACG-T 119
consensus_8313#5 --AGATCGGCACGAGGTNTGATTCGCTGATCACCA---AGTG-GCGACTATAACCACG-T 53
* * * * * *
consensus_8313#3 GAATACAATCCTTTCCACA-ATGAGCTGCC--CAAT----GAGAAGTGGTTTTG-TCGAT 166
consensus_8313#4 GAATACAATCCTTTCCACA-ATGAGCTGCC--CAAT----GAGAAGTGGTTTTG-TCGAT 116
consensus_8313#2 GATTCTGAAGCTGCTGGTGGATCAGGTCCC--GATCCTCGAAACGATGACACCGCTCGAC 197
consensus_8313#0 GATTCTGAAGCTGCTGGTGGATCAGGTCCC--GATCCTCGAAACGATGACACCGCTCGAC 538
consensus_8313#1 CATTATGGTGCAGCGTATG-ATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGGT 178
consensus_8313#5 CATTATGGTGCAGCGTATG-ATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCTGGAT 112
* * * ** * * * * * ** * *
consensus_8313#3 TCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCG-GGCATGCTGTACGGCGAGTACCT 225
consensus_8313#4 TCGGTGCAGGGTGGACACCATCTCGGGTCGGAGGCG-GGCATGCTGTACGGCGAGTACCT 175
consensus_8313#2 TTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCC-GGCTTCCAGAGCCTGCAGTTCCG 256
consensus_8313#0 TTTATGGACTTTCGCGACTACCTGTCGCCGGCGTCC-GGCTTCCAGAGCCTGCAGTTCCG 597
consensus_8313#1 ATCAGGTACTTACGTT-CAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAA 237
consensus_8313#5 ATCAG-TACTTACGTT-CAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAA 170
* * * * ** * * * * ** *
consensus_8313#3 GATGCTGGACAAGGTGCTCAGT-GCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCGG 284
consensus_8313#4 GATGCTGGACAAGGTGCTCAGT-GCGCAGCGCATGCTGTCCGTCGAGGGCAAGAAGCCCG 234
consensus_8313#2 GCTGCTGGAGAACAAGCTCGGC-GTAAAGTCGGAACACCGCGTCAAGTACAACCAGA-AG 314
consensus_8313#0 GCTGCTGGAGAACAAGCTCGGC-GTAAAGTCGGAACACCGCGTCAAGTACAATCAGA-AG 655
consensus_8313#1 CCTGTCCACGTTCCTGATCCCTCGCACAGTCGATACCACGGGTCACGAACGAGATGC-AG 296
consensus_8313#5 CCTGTCCACGTTCCTGATCCCTCGC-CAGTCGATACCACCGCTCACGAACGAGATGC-AG 228
** * ** * ** * ** * * * * *
consensus_8313#3 TGCACGACGAGCATCTGTTC---ATCGT--GACGC-AT---CAGGCGTACGAGCTGTGGT 335
consensus_8313#4 TGCACGACGAGCATCTGTTC---ATCGT--GACGC-AT---CAGGCGTACGAGCTGTGGT 285
consensus_8313#2 TACACGG-AAGTGTTTGCCAGCGATCCG--GGCGCGAT---CGAGCGGATCGG-TACCAC 367
consensus_8313#0 TACACGG-AGGTGTTTGCCAGCGATCCG--GGCGCGAT---CGAGCGGATCGG-TACGAC 708
consensus_8313#1 AAAGCGCTCAACCTCGCCTGGGGATCGAGCGGCACCACTTACGCACGCAACGGTCACGNA 356
consensus_8313#5 AAAGCGCTCAACCTCGCCTGGGGATCGC-CGGC-CCACTT-CGCACGCAACGGTT---CG 282
** * *** * * * * * ** * *
consensus_8313#3 TCAAGCAGAT---CATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACA 392
consensus_8313#4 TCAAGCAGAT---CATCTTCGAGCTGGATTCGATTCGCGATCTCTTCAGCACCGAGCACA 342
consensus_8313#2 CGAGACGGAA---CCGTCGCTGGCCGATCTGGTGCAGAAGTGGCTGGAGCGT-ACGCCCG 423
consensus_8313#0 TGAGACGGAA---CCGTCGCTGGCCGATCTGGTGCAGAAGTGGTTGGAGCGT-ACGCCCG 764
consensus_8313#1 TAGCACTAAATACTAGATACGGGGAAAACACAGCAAACAAGCCTCGAATNGCCCCAGCNA 416
consensus_8313#5 TTGCACTAAT--CTAGAT-CGGGGAAAACACAGCAA-CAACCCTC-AATGCCCCCAGCA- 336
* * * * *
consensus_8313#3 TCGAGGAGTCGCGTACGCTCGAGATTCTGAAGC----GTCTCAACCGGATTGTGATGATT 448
consensus_8313#4 TCGAGGAGTCGCGTACGCTCGAGATTCTGAAGC----GTCTCAACCGGATTGTGATGATT 398
consensus_8313#2 GGCTGGAGCAGGATGGGTTTAAC-TTCTGGGGCA--AGTTTCAGGAGAGCGTCGAGCAGC 480
consensus_8313#0 GGCTGGAGCAGGATGGGTTTAAC-TTCTGGGGCA--AGTTTCAGGAGAGCGTCGAGCAGC 821
consensus_8313#1 CCGTCGAAGTTAATANCATANATACACCGGAGCGGGAAGCTGAGTACATCGTCGGGAGTA 476
consensus_8313#5 CCGTCAAGTCTTCTTTCA---------CCGAGCGGCAAGCT-AGTTTATTGTCGGATAAT 386
* * ** * * *
consensus_8313#3 CTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCGCTCGACTTTATG 508
consensus_8313#4 CTGAAGCTGCTGGTGGATCAGGTCCCGATCCTCGAAACGATGACACCG-TCGACTTTATG 457
consensus_8313#2 TGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATC 540
consensus_8313#0 TGCTGGCCGAGCAGGAAGCGAGCGCAATGTCGGAAGAGCATGAGAACGTGCGCGAGTATC 881
consensus_8313#1 NAGTTGGGCGTTNGGCCCCGGGGGCTAAATACTACCGGTANTAGGACG--AGGGATAACA 534
consensus_8313#5 GGGTTGCCGGTCATCTCGTTGCGGTAATATCATATTG-CAACCTGTCA--CCCGTGTATG 443
* * * *
consensus_8313#3 GACTTTCGCGACTACCTGTCGCCGGCGTCCGGCTTCCAGAGCCTGCAGTTCCG-GCTGCT 567
consensus_8313#4 GACTTTCGCGACTACCTGTCGCCGGCGTCCGGC--------------------------- 490
consensus_8313#2 GGCTG--ATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGT 598
consensus_8313#0 GGCTG--ATGGACATTGACAAGCGGCGCGAGGTGTACAAGTCCATCTTTGACGCGCAGGT 939
consensus_8313#1 AGTTAATTCCACAGTANATTTTGGGCACANAACCCCCTGGCGTACAAACACCCCCCGGGC 594
consensus_8313#5 ATATAAGGC--------------------------------------------------- 452
*
consensus_8313#3 GGAGA------------------------------------------------------- 572
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 GCACGAA----------------------------------------------------- 605
consensus_8313#0 GCACGATGCGCTGGTGGCGCGCGGTGAGCGTCGCTTCACGCATAAGGCGCTGCAGGGTGC 999
consensus_8313#1 TGGNGTAACATTGGAAAGAATNACTTTACAAGTGGGAGAGAAAGCNCGCNGATGANGAAT 654
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GATCATGATAACGTTCTATCGCGACGAGCCACGGTTTAGCCAGCCGCACCAGCTGCTAAT 1059
consensus_8313#1 GCCNGGCGGTATGGCCCACAAAACTTTGGGACAGNNNAGGACCAGATTNCCAAANATNAA 714
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GCTGCTAATGGACATCGATTCGCTGATCACCAAGTGGCGATATAACCACGTCATTATGGT 1119
consensus_8313#1 AAATCNGGGTGACATAGTANACCATCACCTAGGGANCTTTGCGCCNCGGGGCGGAAAGCA 774
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GCAGCGTATGATTGGCTCGCAGCAGCTTGGCACCGGTGGCTCTTCCGGATATCAGTACTT 1179
consensus_8313#1 ANTGCACTACAGCNTGCTGAGCTAGGTCAAGCCCACGANNATGA---------------- 818
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 ACGTTCAACCTTAAGCGATCGGTATAAAGTGTTTCTCGATCTGTTCAACCTGTCCACGTT 1239
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 CCTGATCCCTCGCCAGTCGATACCACCGCTCACGAACGAGATGCAGAAAGCGCTCAACCT 1299
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 CGCCTGGGGATCGCCGGCCCACTTCGCACGCAACGGTTCGTTGCACTAATCTAGATCGGG 1359
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 GAAAACACAGCAACAACCCTCAATGCCCCAGCACCTCCAAGTCTTCTTTCACCGAGCGGC 1419
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 AAGCTAGTTCATTGTCGGATAATGGGTTGCCGGTAATCTCGTTGCGGTAATATCATATTG 1479
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 CAACCTGTCACCCGTGTATGATATAAGGCGACCGTTTTCGGTGCAAATTGAGAGCATCCA 1539
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 AGATGGCCTTTCTCTGTTTGCCGGGGAGTTTTGTTTTGTTTTTTTTTTTTTTTTTTGCAC 1599
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 AGATAAGATAAACATCAAGGTTAAAGAGGGATCGCGGTGGCTCGTGGCAAACTGTGCAAA 1659
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 TAGACACCCATAAACATGCTTCTATTTTGCATACCTTCAGCAGGGGTGGATTTTGTTGTT 1719
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 TGTTGGGCGCAGAAGAAACATGCTAAATAAAATATACTAATTATAAGCACAAGAAGAAAC 1779
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 ATAGGATGCAAATAGGTGTATTGAAACACTAACGACGGGAAGCAGGAGAAGCCCTGCACG 1839
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ------------------------------------------------------------
consensus_8313#4 ------------------------------------------------------------
consensus_8313#2 ------------------------------------------------------------
consensus_8313#0 TTTGGGCAGACACCATTAATCAGAGCAGCGATCGGCGTTGGAATTTTGAGACGCTACAGC 1899
consensus_8313#1 ------------------------------------------------------------
consensus_8313#5 ------------------------------------------------------------
consensus_8313#3 ----------------------
consensus_8313#4 ----------------------
consensus_8313#2 ----------------------
consensus_8313#0 AACAGAATCAATAAAGAAGTCG 1921
consensus_8313#1 ----------------------
consensus_8313#5 ----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||