cluster # 8324

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Anopheles gambiae
cluster # 8324 cluster # 8324 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8324#0 length = 2884 sequences # 9

consensus_8324#1 length = 663 sequences # 1

consensusID : consensus_8324#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2884
fasta sequence

                              [CCGGTTCAGCGCGATAGAGCCAACGACGCGAAGCGAACACTTCCAACACTGTGTGCTGGAAGCTGATTTTTGTACTATTCTTTTGGTTTGTTTTTTTGTTGAACATTTTTTGCGAAAATCTTTGCTTTTAACATAGTGAATAAGAGTGGTAAAAAAGTACAGCACAATAAATAGATATTGTTCAGCACTATTCAGTGAAACGGGAAGTAGTAAGTGTCACTCCTACTGACGATCGCAAATGATCGTAAACCGATCATACTATCCGCAAGGAGCGCAATCGAACAGAACAGGTTAGGAAAGGCGAGTTCAAACTAAAAGATTAAATAATCAGTTGCAAAAGACAATAACAAAATAGTGATATTGAGTGAGTGTGCAACCATCCACGGCACGATGAAGACGGTCGTACCCTTGGGCCTGGTGGTGCTGCTAGGCCTGCTGCAGGCGCAGCCGACGCACAGTGCACCGTTCAATCTGCGCGACCCGGTCGAGGAGGGCCTGGCCATGGCGGAGTCGAAGATGATCGATTTCGAAAACCTGACCGAAAGCGAGCGGCTCTCGTTCCTGCGGGAGAACATCAACATAACCGCGCTCAAGATACAGCAGCGGGTGCTGCGGGAGAAGCAGAACCTGAACCGGACGAGCGGACCGCTGGCCATCACCCAGAGCACCACCGATCGGAACGTTTCGGATCGCGTGAAAACCAGAAAAGAATACGCCGAACACATCATCGGTAACATTAAGCACAACATCGAGACGAACCTGATGCGCAACGACACCGGGCATATGGGGGCGGCGACGCACGAGATGGCCTTTTCCGCCGTGTGCGACATGCCGAAAAACACCAACGCGAGCCAGTGGAACAGCGACAACACCTGGAATCTGTACTTCCGTCTGCCTCACAATAAGCAGTATAATTCTGTCAGCTCGGCTGTACTAAGACTTTACATGCACGGTGCCAACTCGACTGGTTCGCGCGAGTCGGACAACTGCAAGAACCCGTCGGAGCAGATGATTCGCATCACGACCTCGGTCTACTTCCGCAAGAACCGCAAAGATAATGCCGGCCAGGAGCGCAAGAAGATCTGCAGCTGCATCACGATCACCCGATCGTACCGGGGCTGGATCACGTTGGACACGCTGCTCGCGGTGAAGGCGTGGGACAAGCCGAACCGCAACCTGCTCATCGCGATCGACGTCGAGGATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAGGCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGACCTATCTCCGAAGCACATATGCAGGGTCCGCTCATGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAAAAGCCGGTCGGTGTCTTCCGCCTCGGTGCTGTCAAGCGAGGAACGCAACCTATGATGTGGTAGCGCTGGAGCGATGGAGCAATACATCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCGGTGTACGATCGAGCTAGGGTAGTAGGTACTGGTTGGTACCGTTTCCGTAACATGCGCTTCCTTTCTTTAAGTTCCTTTTTTTATTTCCCCTTGTTCCTGAGCTGAGTTTCTTCGTTTAAGGTATAGGTCGTTTCACGCACCGGAGAGTGTGACTCAGAATGCGACGCCAAACTGTAGAGTTCCTGTGCTTCTTAGTGCTGTACTTAAGTTTGATTGATGTACGTGTAGGTGTATATGCGATGTGCTGAGGGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCCATCCTGCGTGTGCAAGTTGTGTAATGTGGTGTGAGAACACACAGACAAACACAAA---ATT-ATTCAATCACTCTCAAAATGGTTAAGCTTTATACATAGGCAAGGTAGGTTAACAGGGACGATAGGGCGATCAGCGATCACGCTGAGAGCTGAACAGTGTGCGACTAAAATCCCAGAGCCCGATCGTAACGATCGTAACAGAGAATGCAGAGGATCAGAACAG-----AAAAAAAAACAATGTATGTAAATATTCATTTCTCACGCTTTCCTTGCTGAGATGCCCCGCTTTGTGTCACACTGTGTGTGAGATAACGGCGAGGGAGAATAGGAT-GGAGCGTGTGTTTGCTACGTTCACACTATCATTGTATCTAGACGATATTATTTATTACCGTTTTTGTCACAACATTTACATCCCTTTAGAAGGGATGCAGTTTACTTTCGTTCCCTTTTTCTTAAGCTGGGAAGTTTTCCCCTCTATTCCCGTGCTTTTGCTTCGCTTGCTCACTCTGAAACGCTAAAGCAACTCTGCTGCGGATGCTGCGCTGAAACCAGATTGTAAATACCTAGGGAAGCGAATATACGTTTACTGNTTCTCGTGTCTGCTGTGAGCAGAATAGTGTAGCTAGTTATAAGAAGTGAAACATAGCAGTGGNTCTTTTCCTCCCCCCGGTTTGATCG]

[+] EMBL BM656527             [CCGGTTCAGCGCGATAGAGCCAACGACGCGAAGCGAACACTTCCAACACTGTGTGCTGGAAGCTGATTTTTGTACTATTCTTTTGGTTTGTTTTTTTGTTGAACATTTTTTGCGAAAATCTTTGCTTTTAACATAGTGAATAAGAGTGGTAAAAAAGTACAGCACAATAAATAGATATTGTTCAGCACTATTCAGTGAAACGGGAAGTAGTAAGTGTCACTCCTACTGACGATCGCAAATGATCGTAAACCGATCATACTATCCGCAAGGAGCGCAATCGAACAGAACAGGTTAGGAAAGGCGAGTTCAAACTAAAAGATTAAATAATCAGTTGCAAAAGACAATAACAAAATAGTGATATTGAGTGAGTGTGCAACCATCCACGGCACGATGAAGACGGTCGTACCCTTGGGCCTGGTGGTGCTGCTAGGCCTGCTGCAGGCGCAGCCGACGCACAGTGCACCGTTCAATCTGCGCGACCCGGTCGAGGAGGGCCTGGCCATGGCGGAGTCGAAGATGATCGATTTCGAAAACCTGACCGAAAGCGAGCGGCTCTCGTTCCTGCGGGAGAACATCAACATAACCGCGCTCAAGATACAGCAGCGGGTGCTGCGGGAGAAGCAGAACCTGAACCGGACGAGCGGACCGCTGGCCATCACCCAGAGCACCACCGATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM629436             [                                                                                                                                                                                                                                                                    ccgCGCAAGGAGCGCAATCGAACAGAACAGGTTAGGAAAGGCGAGTTCAAACTAAAAGATTAAATAATCAGTTGCAAAAGACAATAACAAAATAGTGATATTGAGTGAGTGTGCAACCATCCACGGCACGATGAAGACGGTCGTACCCTTGGGCCTGGTGGTGCTGCTAGGCCTGCTGCAGGCGCAGCCGACGCACAGTGCACCGTTCAATCTGCGCGACCCGGTCGAGGAGGGCCTGGCCATGGCGGAGTCGAAGATGATCGATTTCGAAAACCTGACCGAAAGCGAGCGGCTCTCGTTCCTGCGGGAGAACATCAACATAACCGCGCTCAAGATACAGCAGCGGGTGCTGCGGGAGAAGCAGAACCTGAACCGGACGAGCGGACCGCTGGCCATCACCCAGAGCACCACCGATCGGAACGTTTCGGATCGCGTGAAAACCAGAAAAGAATACGCCGAACACATCATCGGTAACATTAAGCACAACATCGAGACGAACCTGATGCGCAACGACACCGGGCATATGGGGGCGGCGACGCACGAGATGGCCTTTTCCGCCGTGTGCGACATGCCGAAAAACACCAACGCGAGCCAGTGGAACAGCGACAACACCTGGAATCTGTACTTCCGTCTGCCTCACAATAAGCAGTATAATTCTGTCAGCTCGGCTGTACTAAGACTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM646099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cCGAGCCAGTGGAACAGCGACAACACCTGGAATCTGTACTTCCGTCTGCCTCACAATAAGCAGTATAATTCTGTCAGCTCGGCTGTACTAAGACTTTACATGCACGGTGCCAACTCGACTGGTTCGCGCGAGTCGGACAACTGCAAGAACCCGTCGGAGCAGATGATTCGCATCACGACCTCGGTCTACTTCCGCAAGAACCGCAAAGATAATGCCGGCCAGGAGCGCAAGAAGATCTGCAGCTGCATCACGATCACCCGATCGTACCGGGGCTGGATCACGTTGGACACGCTGCTCGCGGTGAAGGCGTGGGACAAACCGAACCGCAACCTGCTCATCGCGATCGACGTCGAGGATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAGGCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGGCCTATCTCCGAAGCACATATGCAGGGTCCGCTCATGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAACACCACTACAAGGGCTACTACCTGGCGAACGATTCTACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGGTTGTGGGAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX628253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGCGCGAGTCGGACAACTGCAAGAACCCGTCGGAGCAGATGATTCGCATCACGACCTCGGTCTACTTCCGCAAGAACCGCAAAGATAATGCCGGCCAGGAGCGCAAGAAGATCTGCAGCTGCATCACGATCACACGATCGTACCGGGGCTGGATCACGTTGGACACGCTGCTCGCGGTGAAGGCGTGGGACAAGCCGAACCGCAACCTGCTCATCGCGATCGACGTCGAGGATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAGGCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGACCTATCTCCGAAGCACATATGCAGGGTCCGCTCATGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCTGGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM621303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccGCGTGGGACAAGCCGAACCGCAACCTGCTCATCGCGATCGACGTCGAGGATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAGGCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGACCTATCTCCGAAGCACATATGCAGGGTCCGCTCATGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAAAAGCCGGTCGGTGTCTTCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08CIU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGTAAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCAGGAAGTGACGGCAGTAATG AGAGCCGGTCGGTGTCCTCCGCCTCGGTGCTGTCAAGCGAGGAACGCAACCTATGATGTGGTAGCGCTGGAGCGATGGAGCAATACATCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCGGTGTACGATCGAGCTAGGGTAGTAGGTACTGGTTGGTACCGTTTCCGTAACATGCGCTTCCTTTCTTTAAGTTCCTTTTTTTATTTCCCCTTGTTCCTGAGCTGAGTTTCTTCGTTTAAGGTATAGGTCGTTTCACGCACCGGAGAGTGTGACTCAGAATGCGACGCCAAACTGTAGAGTTCCTGTGCTTCTTAGTGCTGTACTTAAGTTTGATTGATGTACGTGTAGGTGTATATGCGATGTGCTGAGGGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCCATCCTGCGTGTGCAAGTTGTGTAATGTGGTGTGAGAACACACAGACAAACAAAAA   AAT Aa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX621249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGATGTACGTGTAGGTGTATATGCGATGTGCTGAGCGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCGATCCTGCGTGTGCAAGTTGTGTATTGTGGTGTGAGAACACAC  ACAAACACACACCGATTCATTCAATCACTCTCAAAATGGTTAAGCTTTATACATAGGCAAGGTAGGTTAACAGGGACGATAGGGCGATCAGCGATCACGCTGAGAGCTGAACAGTGTGCGACTAAAATCCCAGAGCCCGATCGTAACGATCGTAACAGAGAATGCAGAGGATCAGAACAGAAGAAAAAAAAAAACAATGTATGTAAATATTCATTTCTCACGCTTTCCTTGCTGAGATGCCCCGCTTTGTGTCACACTGTGTGTGAGATAACGGCGAGGGAGAATAGGATGGGAGCGTGTGTTTGCTACGTTCACACTATCATTGTATCTAGACGATATTATTTATTACCGTTTTTGTCACAACATTTACATCCCTTTAGAAGGGATGCAGTTTACTTTCGTTCCCTTTTTCTTAAGCTGGGAAGTTTTTCCCTCTATCCCCGTGCTTTTGCTTCGCTTGTTCACACTGAAACGCTAAAGCAACTCTGCTGCGGATGCTGCGCTGAAACCAGATTGTAAATACCTAGGGAAGCGAATATACGTTTACTGNTTCTCGTGTCTGCTGTGAGCAGAATAGTGTAGCTAGTTATAAGAAGTGAAACATAGCAGTGGNTCTTTTCCTCCCCCCGGTTTGATCG]
[+] EMBL BX620755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATATGCGATGTGCTGAGGGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCCATCCTGCGTGTGCAAGTTGTGTAATGTGGTGTGAGAACACACAGACACACACCGA   TTC ATTCATTCACTTTCAAAATGGTTAAGCTTTATACATAGGCAAGGTAGGTTAAAAGGGACGATAGGGCGATCAGCGATCACGCTGAGAGCTGAACAGTGCGCCACAAAAATCCCACAGCCCGATCGAAACGATCGTAACAGAGGATGCAGAGTATCAGAACAG     AACAAAAAACAATGTATGTAAATATTCATTTCTCACGCTCTCCTTGCTGAGATGCCCCGCTTTGTGTCACACTGTGTGTGAGATAACGGTGAGGGAGGATAGGAT GGAGCGTGTGTTTGCTACGTTCGCGCTATCATTGTATCTAGACGATATTATTTATTACCGTTTTTGTCACAACATTTGCCTCCCTTTAGAAGGGATGCAGTTTACTTTCGTTCCCTTTTTCTTAAGCTGGGAAGTTTTCCCCTCTATTCCCGTGCTTTTGCTTCGCTTGCTCACTCTGAAACGCTAAAGCAACTCTGCTGCCGATGCTGCGCTGAAACCAGATTGTAAATACCTAGGGAAGCGAATATACGTTTACTGTTTCTt                                                                                   ]
[+] EMBL BX622308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aaTTACTTTCCTTCCCTTTTTCTTAAGCTGGGAAGTTTTCCCCTCTATTCCCGTGCTTTTGCTTCGCTTGCTCACTCTGAAACGCTAAAGCAACTCTGCTGCGGATGCTGCGCTGAAACCACATTGTAAATACCTATGGAAGC                                                                                                         ]




>consensus_8324#0
CCGGTTCAGCGCGATAGAGCCAACGACGCGAAGCGAACACTTCCAACACTGTGTGCTGGA
AGCTGATTTTTGTACTATTCTTTTGGTTTGTTTTTTTGTTGAACATTTTTTGCGAAAATC
TTTGCTTTTAACATAGTGAATAAGAGTGGTAAAAAAGTACAGCACAATAAATAGATATTG
TTCAGCACTATTCAGTGAAACGGGAAGTAGTAAGTGTCACTCCTACTGACGATCGCAAAT
GATCGTAAACCGATCATACTATCCGCAAGGAGCGCAATCGAACAGAACAGGTTAGGAAAG
GCGAGTTCAAACTAAAAGATTAAATAATCAGTTGCAAAAGACAATAACAAAATAGTGATA
TTGAGTGAGTGTGCAACCATCCACGGCACGATGAAGACGGTCGTACCCTTGGGCCTGGTG
GTGCTGCTAGGCCTGCTGCAGGCGCAGCCGACGCACAGTGCACCGTTCAATCTGCGCGAC
CCGGTCGAGGAGGGCCTGGCCATGGCGGAGTCGAAGATGATCGATTTCGAAAACCTGACC
GAAAGCGAGCGGCTCTCGTTCCTGCGGGAGAACATCAACATAACCGCGCTCAAGATACAG
CAGCGGGTGCTGCGGGAGAAGCAGAACCTGAACCGGACGAGCGGACCGCTGGCCATCACC
CAGAGCACCACCGATCGGAACGTTTCGGATCGCGTGAAAACCAGAAAAGAATACGCCGAA
CACATCATCGGTAACATTAAGCACAACATCGAGACGAACCTGATGCGCAACGACACCGGG
CATATGGGGGCGGCGACGCACGAGATGGCCTTTTCCGCCGTGTGCGACATGCCGAAAAAC
ACCAACGCGAGCCAGTGGAACAGCGACAACACCTGGAATCTGTACTTCCGTCTGCCTCAC
AATAAGCAGTATAATTCTGTCAGCTCGGCTGTACTAAGACTTTACATGCACGGTGCCAAC
TCGACTGGTTCGCGCGAGTCGGACAACTGCAAGAACCCGTCGGAGCAGATGATTCGCATC
ACGACCTCGGTCTACTTCCGCAAGAACCGCAAAGATAATGCCGGCCAGGAGCGCAAGAAG
ATCTGCAGCTGCATCACGATCACCCGATCGTACCGGGGCTGGATCACGTTGGACACGCTG
CTCGCGGTGAAGGCGTGGGACAAGCCGAACCGCAACCTGCTCATCGCGATCGACGTCGAG
GATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAG
GCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGACCTATCTCCGAAGCACATATGCA
GGGTCCGCTCATGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCAG
AAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTAT
CTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGAC
TCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCAC
GACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTAC
TTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCAC
CCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGAC
GCTCCAGTTGCTGGAAGTGACGGCAGTGACGAAAAGCCGGTCGGTGTCTTCCGCCTCGGT
GCTGTCAAGCGAGGAACGCAACCTATGATGTGGTAGCGCTGGAGCGATGGAGCAATACAT
CAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCG
GTGTACGATCGAGCTAGGGTAGTAGGTACTGGTTGGTACCGTTTCCGTAACATGCGCTTC
CTTTCTTTAAGTTCCTTTTTTTATTTCCCCTTGTTCCTGAGCTGAGTTTCTTCGTTTAAG
GTATAGGTCGTTTCACGCACCGGAGAGTGTGACTCAGAATGCGACGCCAAACTGTAGAGT
TCCTGTGCTTCTTAGTGCTGTACTTAAGTTTGATTGATGTACGTGTAGGTGTATATGCGA
TGTGCTGAGGGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCCATCCTGCG
TGTGCAAGTTGTGTAATGTGGTGTGAGAACACACAGACAAACACAAAATTATTCAATCAC
TCTCAAAATGGTTAAGCTTTATACATAGGCAAGGTAGGTTAACAGGGACGATAGGGCGAT
CAGCGATCACGCTGAGAGCTGAACAGTGTGCGACTAAAATCCCAGAGCCCGATCGTAACG
ATCGTAACAGAGAATGCAGAGGATCAGAACAGAAAAAAAAACAATGTATGTAAATATTCA
TTTCTCACGCTTTCCTTGCTGAGATGCCCCGCTTTGTGTCACACTGTGTGTGAGATAACG
GCGAGGGAGAATAGGATGGAGCGTGTGTTTGCTACGTTCACACTATCATTGTATCTAGAC
GATATTATTTATTACCGTTTTTGTCACAACATTTACATCCCTTTAGAAGGGATGCAGTTT
ACTTTCGTTCCCTTTTTCTTAAGCTGGGAAGTTTTCCCCTCTATTCCCGTGCTTTTGCTT
CGCTTGCTCACTCTGAAACGCTAAAGCAACTCTGCTGCGGATGCTGCGCTGAAACCAGAT
TGTAAATACCTAGGGAAGCGAATATACGTTTACTGNTTCTCGTGTCTGCTGTGAGCAGAA
TAGTGTAGCTAGTTATAAGAAGTGAAACATAGCAGTGGNTCTTTTCCTCCCCCCGGTTTG
ATCG

consensusID : consensus_8324#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence

                              [CCGGCAAACTGCCAACTACCCCTTCCCAGCAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAGAGCCGGTCGGTGTCTTCCGCCTCGGTGCTATCAAGCGAGGAACGCAACCTATGATGTGGTAGCGGTGGAGCGATGGAGCAATACATCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCGGTGTACGATTCGAGCTAGGGTAGTAGGTACTGGTCGGTACCGTTTCCGTAACATGCGCTTCCTTTCT]

[+] EMBL BM599792             [CCGGCAAACTGCCAACTACCCCTTCCCAGCAACCCGCGACTAGACCTAATGTTCCAGAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAGAGCCGGTCGGTGTCTTCCGCCTCGGTGCTATCAAGCGAGGAACGCAACCTATGATGTGGTAGCGGTGGAGCGATGGAGCAATACATCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCGGTGTACGATTCGAGCTAGGGTAGTAGGTACTGGTCGGTACCGTTTCCGTAACATGCGCTTCCTTTCT]




>consensus_8324#1
CCGGCAAACTGCCAACTACCCCTTCCCAGCAACCCGCGACTAGACCTAATGTTCCAGAAG
CGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTATCTG
GCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGACTCG
AAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCACGAC
CACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTACTTG
TTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCACCCG
GTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGACGCT
CCAGTTGCTGGAAGTGACGGCAGTGACGAGAGCCGGTCGGTGTCTTCCGCCTCGGTGCTA
TCAAGCGAGGAACGCAACCTATGATGTGGTAGCGGTGGAGCGATGGAGCAATACATCAAC
AACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTCGGTGT
ACGATTCGAGCTAGGGTAGTAGGTACTGGTCGGTACCGTTTCCGTAACATGCGCTTCCTT
TCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8324#0      CCGGTTCAGCGCGATAGAGCCAACGACGCGAAGCGAACACTTCCAACACTGTGTGCTGGA 60
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      AGCTGATTTTTGTACTATTCTTTTGGTTTGTTTTTTTGTTGAACATTTTTTGCGAAAATC 120
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TTTGCTTTTAACATAGTGAATAAGAGTGGTAAAAAAGTACAGCACAATAAATAGATATTG 180
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TTCAGCACTATTCAGTGAAACGGGAAGTAGTAAGTGTCACTCCTACTGACGATCGCAAAT 240
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GATCGTAAACCGATCATACTATCCGCAAGGAGCGCAATCGAACAGAACAGGTTAGGAAAG 300
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GCGAGTTCAAACTAAAAGATTAAATAATCAGTTGCAAAAGACAATAACAAAATAGTGATA 360
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TTGAGTGAGTGTGCAACCATCCACGGCACGATGAAGACGGTCGTACCCTTGGGCCTGGTG 420
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GTGCTGCTAGGCCTGCTGCAGGCGCAGCCGACGCACAGTGCACCGTTCAATCTGCGCGAC 480
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CCGGTCGAGGAGGGCCTGGCCATGGCGGAGTCGAAGATGATCGATTTCGAAAACCTGACC 540
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GAAAGCGAGCGGCTCTCGTTCCTGCGGGAGAACATCAACATAACCGCGCTCAAGATACAG 600
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CAGCGGGTGCTGCGGGAGAAGCAGAACCTGAACCGGACGAGCGGACCGCTGGCCATCACC 660
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CAGAGCACCACCGATCGGAACGTTTCGGATCGCGTGAAAACCAGAAAAGAATACGCCGAA 720
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CACATCATCGGTAACATTAAGCACAACATCGAGACGAACCTGATGCGCAACGACACCGGG 780
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CATATGGGGGCGGCGACGCACGAGATGGCCTTTTCCGCCGTGTGCGACATGCCGAAAAAC 840
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ACCAACGCGAGCCAGTGGAACAGCGACAACACCTGGAATCTGTACTTCCGTCTGCCTCAC 900
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      AATAAGCAGTATAATTCTGTCAGCTCGGCTGTACTAAGACTTTACATGCACGGTGCCAAC 960
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TCGACTGGTTCGCGCGAGTCGGACAACTGCAAGAACCCGTCGGAGCAGATGATTCGCATC 1020
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ACGACCTCGGTCTACTTCCGCAAGAACCGCAAAGATAATGCCGGCCAGGAGCGCAAGAAG 1080
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ATCTGCAGCTGCATCACGATCACCCGATCGTACCGGGGCTGGATCACGTTGGACACGCTG 1140
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CTCGCGGTGAAGGCGTGGGACAAGCCGAACCGCAACCTGCTCATCGCGATCGACGTCGAG 1200
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GATCAGGACGATCGGCCGATGCGGGCGGCCGATTTCTTCCGGCCGGCCGACTGCACGGAG 1260
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GCAAGTAAACAACACAACGCAGCCGTTCTTCCATGGACCTATCTCCGAAGCACATATGCA 1320
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GGGTCCGCTCA-TGAAATGGACAATGTGCCACACAACCCGCGACTAGACCTAATGTTCCA 1379
consensus_8324#1      ---CCGGCAAACTGCCAACTACCCCTTCCCA-GCAACCCGCGACTAGACCTAATGTTCCA 56
                          * **  * **  *   **    * ***  ***************************

consensus_8324#0      GAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTA 1439
consensus_8324#1      GAAGCGCATGCATCACAATCATCGGCCGTACCGCAACAAGCACCACTACAAGGGCTACTA 116
                      ************************************************************

consensus_8324#0      TCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGA 1499
consensus_8324#1      TCTGGCAAACGATTCCACCGGCAGCGCGACCGGCAACTCGTACGAGCACGATGGCACCGA 176
                      ************************************************************

consensus_8324#0      CTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCA 1559
consensus_8324#1      CTCGAAGTGTCCCCGGTTTGTGGGCGAAGACGCCGGTCCACCAGCCCAGCAAACCCACCA 236
                      ************************************************************

consensus_8324#0      CGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTA 1619
consensus_8324#1      CGACCACGATCAGCACCAGGCCACCAAGCACAACGGCCAGCGTCCGAACCCACTGTACTA 296
                      ************************************************************

consensus_8324#0      CTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCA 1679
consensus_8324#1      CTTGTTTAAGGAGCTGCATGGCCACCAGCATCAGCAGCAGCAGCACGTCGTCGTACAGCA 356
                      ************************************************************

consensus_8324#0      CCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGA 1739
consensus_8324#1      CCCGGTGGTGGTTAGCCGGGCGCAGATGAAGCGACGCCATCTGAACCATCGCGCCCGGGA 416
                      ************************************************************

consensus_8324#0      CGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAAAAGCCGGTCGGTGTCTTCCGCCTCGG 1799
consensus_8324#1      CGCTCCAGTTGCTGGAAGTGACGGCAGTGACGAGA-GCCGGTCGGTGTCTTCCGCCTCGG 475
                      ********************************* * ************************

consensus_8324#0      TGCTGTCAAGCGAGGAACGCAACCTATGATGTGGTAGCGCTGGAGCGATGGAGCAATACA 1859
consensus_8324#1      TGCTATCAAGCGAGGAACGCAACCTATGATGTGGTAGCGGTGGAGCGATGGAGCAATACA 535
                      **** ********************************** ********************

consensus_8324#0      TCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTC 1919
consensus_8324#1      TCAACAACAATTAGACGTGTAAGAGGAGATTCGGGCATCGGTAACATAATGTTGATGCTC 595
                      ************************************************************

consensus_8324#0      GGTGTACGAT-CGAGCTAGGGTAGTAGGTACTGGTTGGTACCGTTTCCGTAACATGCGCT 1978
consensus_8324#1      GGTGTACGATTCGAGCTAGGGTAGTAGGTACTGGTCGGTACCGTTTCCGTAACATGCGCT 655
                      ********** ************************ ************************

consensus_8324#0      TCCTTTCTTTAAGTTCCTTTTTTTATTTCCCCTTGTTCCTGAGCTGAGTTTCTTCGTTTA 2038
consensus_8324#1      TCCTTTCT---------------------------------------------------- 663
                      ********                                                    

consensus_8324#0      AGGTATAGGTCGTTTCACGCACCGGAGAGTGTGACTCAGAATGCGACGCCAAACTGTAGA 2098
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GTTCCTGTGCTTCTTAGTGCTGTACTTAAGTTTGATTGATGTACGTGTAGGTGTATATGC 2158
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      GATGTGCTGAGGGGAGAGTTAAGCCGATACACAGGTAGTTAAGTTAGATGCGCCATCCTG 2218
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CGTGTGCAAGTTGTGTAATGTGGTGTGAGAACACACAGACAAACACAAAATTATTCAATC 2278
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ACTCTCAAAATGGTTAAGCTTTATACATAGGCAAGGTAGGTTAACAGGGACGATAGGGCG 2338
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ATCAGCGATCACGCTGAGAGCTGAACAGTGTGCGACTAAAATCCCAGAGCCCGATCGTAA 2398
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CGATCGTAACAGAGAATGCAGAGGATCAGAACAGAAAAAAAAACAATGTATGTAAATATT 2458
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CATTTCTCACGCTTTCCTTGCTGAGATGCCCCGCTTTGTGTCACACTGTGTGTGAGATAA 2518
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      CGGCGAGGGAGAATAGGATGGAGCGTGTGTTTGCTACGTTCACACTATCATTGTATCTAG 2578
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ACGATATTATTTATTACCGTTTTTGTCACAACATTTACATCCCTTTAGAAGGGATGCAGT 2638
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TTACTTTCGTTCCCTTTTTCTTAAGCTGGGAAGTTTTCCCCTCTATTCCCGTGCTTTTGC 2698
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TTCGCTTGCTCACTCTGAAACGCTAAAGCAACTCTGCTGCGGATGCTGCGCTGAAACCAG 2758
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      ATTGTAAATACCTAGGGAAGCGAATATACGTTTACTGNTTCTCGTGTCTGCTGTGAGCAG 2818
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      AATAGTGTAGCTAGTTATAAGAAGTGAAACATAGCAGTGGNTCTTTTCCTCCCCCCGGTT 2878
consensus_8324#1      ------------------------------------------------------------
                                                                                  

consensus_8324#0      TGATCG 2884
consensus_8324#1      ------