These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_843#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence [CCGGGCTATTTCACACAGAATAGAGTCATACAATAGGACAGCAGCGAATCAACTCAGGCGAATTCAAATTTCAGTTCAAATTGTAGCCTAGAGTAATACATTTAAAATGTTTGGAACAAAACAAAACAATTAATTTGAATTCCTAGTATCACTGATGCTGCAAGGAGATCTCAGTATTGGTGTTAACACATGCCTCCATATTTCAATTGTGAATAAAGCTCTGTCTCATGGTGTAATACAATGGTGAAAGGACTCATTTGCTAATTCGGGCACTCAATAACTTCAGTTTTTGCTTCTACAACCGTTTCGTAACAGTAGCTTAAAACAAAAACATACACATCTGCGTACGACTAAACTAACTTGTAAGGAATTGATTTAACCATGAACTAATTCCTTCTTCATAGTTGAACATTTCCATGCTATGATTACTCCTCCCCCTCTTGACTCTTGTTTACCTATGTTTCATCGTTTTAGAACTGTATTCTGAATACTCATTAATTTAACGAAAACAAAAGTCAGTCGAGGCATGAACAATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTATACAAAATTACAAACATCAATGGCCATTAACCAGATTGCCAGA] [+] EMBL BM596787 [CCGGGCTATTTCACACAGAATAGAGTCATACAATAGGACAGCAGCGAATCAACTCAGGCGAATTCAAATTTCAGTTCAAATTGTAGCCTAGAGTAATACATTTAAAATGTTTGGAACAAAACAAAACAATTAATTTGAATTCCTAGTATCACTGATGCTGCAAGGAGATCTCAGTATTGGTGTTAACACATGCCTCCATATTTCAATTGTGAATAAAGCTCTGTCTCATGGTGTAATACAATGGTGAAAGGACTCATTTGCTAATTCGGGCACTCAATAACTTCAGTTTTTGCTTCTACAACCGTTTCGTAACAGTAGCTTAAAACAAAAACATACACATCTGCGTACGACTAAACTAACTTGTAAGGAATTGATTTAACCATGAACTAATTCCTTCTTCATAGTTGAACATTTCCATGCTATGATTACTCCTCCCCCTCTTGACTCTTGTTTACCTATGTTTCATCGTTTTAGAACTGTATTCTGAATACTCATTAATTTAACGAAAACAAAAGTCAGTCGAGGCATGAACAATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTATACAAAATTACAAACATCAATGGCCATTAACCAGATTGCCAGA] consensusID : consensus_843#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [CGGGAAACGGATTTTGTTTTATTTTGTATTCTGAATACTCATTAATTTAACTAAAACAAAAGTCAGTCGAGGCATGAACAATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTATACAAAATTACAAACATCAATGGCCATTAACCAGATTGCCAGAAACAATTTTCATCACACACATCTATATTAAATTTAAAATAATCGGTATAGACGAGACACATATGCAAACGTGAAAACATATAGCGCAAAAACGAAAGACAAAACAATGCATTTGTGTTTACATACATTTCCATCACAAA] [-] EMBL AGA281368 [CGGGAAACGGATTTTGTTTTATTTTGTATTCTGAATACTCATTAATTTAACTAAAACAAAAGTCAGTCGAGGCATGAACAATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTATACAAAATTACAAACATCAATGGCCATTAACCAGATTGCCAGAAACAATTTTCATCACACACATCTATATTAAATTTAAAATAATCGGTATAGACGAGACACATATGCAAACGTGAAAACATATAGCGCAAAAACGAAAGACAAAACAATGCATTTGTGTTTACATACATTTCCATCACAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_843#0 CCGGGCTATTTCACACAGAATAGAGTCATACAATAGGACAGCAGCGAATCAACTCAGGCG 60 consensus_843#1 ------------------------------------------------------------ consensus_843#0 AATTCAAATTTCAGTTCAAATTGTAGCCTAGAGTAATACATTTAAAATGTTTGGAACAAA 120 consensus_843#1 ------------------------------------------------------------ consensus_843#0 ACAAAACAATTAATTTGAATTCCTAGTATCACTGATGCTGCAAGGAGATCTCAGTAT-TG 179 consensus_843#1 -------------------------------------CGGGAAACGGATTTTGTTTTATT 23 * * ** *** * * * * consensus_843#0 GTGTTAACACATGCCTCCATATTTCAATTGTGAATAAAGCTCTGTCTCATGGTGTAATAC 239 consensus_843#1 TTGTATTCTGAATACTCATTAATTTAACTA-AAACAAAAGTCAGT--CGAGGCATGA-AC 79 *** * * *** ** ** ** * ** *** ** ** * ** * * ** consensus_843#0 AATGGTGAAAGGACTCATTTGCTAATT-CGGGCACTCAATAACTTCAGTTTTTGCTT--- 295 consensus_843#1 AATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTATACA 139 *** * *** ** ** ** * * * * * *** **** *** ** * consensus_843#0 ---CTACAACCGTTTCGTAACAGTAGCTTAA--AACAAAAACATACACATCTGCGTACGA 350 consensus_843#1 AAATTACAAACATCAATGGCCATTAACCAGATTGCCAGAAACAATTTTCATCACACACAT 199 ***** * * ** ** * * ** ***** * ** consensus_843#0 CTAAACTAACTTGTAAGGAATTGATTTAACCATGAACTAATTCCTTCTTCATAGTTGAAC 410 consensus_843#1 CTATATTAAATTTAAAATAATCGGT------ATAGACGAGACACATATGCAAACGTGAAA 253 *** * *** ** ** *** * * ** ** * * * * ** * **** consensus_843#0 ATTTCCA-TGCTATGATTACTCCTCCCCCTCTTGACTCTTGTTTACCTATGTTTCATCGT 469 consensus_843#1 ACATATAGCGCAAAAACGAAAGACAAAACAATGCATTTGTGTTTACATACATTTC--CAT 311 * * * ** * * * * * * * ******* ** **** * * consensus_843#0 TTTAGAACTGTATTCTGAATACTCATTAATTTAACGAAAACAAAAGTCAGTCGAGGCATG 529 consensus_843#1 CACAAA------------------------------------------------------ 317 * * consensus_843#0 AACAATTGATAAATGAGACACACGCACACAACAGCCCCACAAAAACTATCATTTATGTAT 589 consensus_843#1 ------------------------------------------------------------ consensus_843#0 ACAAAATTACAAACATCAATGGCCATTAACCAGATTGCCAGA 631 consensus_843#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||