cluster # 8439

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Anopheles gambiae
cluster # 8439 cluster # 8439 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8439#0 length = 1827 sequences # 7
consensus_8439#1 length = 649 sequences # 1

consensus_8439#2 length = 538 sequences # 1
consensus_8439#3 length = 444 sequences # 1

consensusID : consensus_8439#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1827
fasta sequence

                              [CCGCGGAACGGCTTCGCTCGGCATTCTTCTTGCCCGCTACTTCCGCCAGACCTGGGTTGGCAGTCAGATGTGCGGCAAAGATCAGTGGTTTGCGTGGCATCGATTCCTGATGATTGTCACGTGGGCCCTCACAGTCGCAGGTATTGTGGTAATTTTTGTTGAAATCGGAGGCTGGTCGCAGGTTCGCAATCCTCACGCCATTCTCGGCATCGTCACGACTGTACTGTGCTTCCTGCAACCCATCGGTGCATTCTTCCGGCCACATCCGGGCTCGAGCAAGCGGCCCATCTTCAACTGGCTGCACTGGTTGGGTGGCAATCTGGCGCACGTGATCGCGATCGTTGCTATCTTCTTTGCCGTACAGCTGCAGAAGGCGGAACTGCCCGAGTGGATGGACTTTATCCTTGTCGCGTTCGTCGCCTTCCACGTGTTTATGCATCTGATTTTCTCCATCGGTGGTTGCGTGAGCGAGCGAAGAAGTGGCCAGCGTGTGACGTCCTTCCCAATGGCCGATATGACTCCGTCGCGAAATTCCATGAGCTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCTGTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTCCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAG-AGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGAATAGCCAACCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATTTCCGGGTGTAGCGAAGCACT-GGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAACAAAAACATGCAAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGCACATTCTGTTGAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTTGAAACATAATAAATGTTGCCATTGCTAAAAGGCTAACCGAAAAAAAAAAAAAA]

[+] EMBL BM624878             [CCGCGGAACGGCTTCGCTCGGCATTCTTCTTGCCCGCTACTTCCGCCAGACCTGGGTTGGCAGTCAGATGTGCGGCAAAGATCAGTGGTTTGCGTGGCATCGATTCCTGATGATTGTCACGTGGGCCCTCACAGTCGCAGGTATTGTGGTAATTTTTGTTGAAATCGGAGGCTGGTCGCAGGTTCGCAATCCTCACGCCATTCTCGGCATCGTCACGACTGTACTGTGCTTCCTGCAACCCATCGGTGCATTCTTCCGGCCACATCCGGGCTCGAGCAAGCGGCCCATCTTCAACTGGCTGCACTGGTTGGGTGGCAATCTGGCGCACGTGATCGCGATCGTTGCTATCTTCTTTGCCGTACAGCTGCAGAAGGCGGAACTGCCCGAGTGGATGGACTTTATCCTTGTCGCGTTCGTCGCCTTCCACGTGTTTATGCATCTGATTTTCTCCATCGGTGGTTGCGTGAGCGAGCGAAGAAGTGGCCAGCGTGTGACGTCCTTCCCAATGGCCGATATGACTCCGTCGCGAAATTCCATGAGCTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCTGTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTTCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX628261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCCTGTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTCCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAG AGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM612300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGGTGATTGTCGTCCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAG AGAGCAATTTCTAGCGGGTCAGTAGTGGAAAG  AAAAAAAACTCAAACAATTCAAACCGCTCAAAAAGAAGCTAATCGCTCGATGCGAATCATGTGACACATAGCGCATCGGTAGCATTGATAGAAGCAGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCCCTATTGTAAGTGGTACTTATGATGATCG  TTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACAACAGAAACATAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09PN7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    actggAAATGCTCCCATGTTGGATGGTTTGTGTGCTATCACTATTCTAGTAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAAC AAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGAATAGCCAACCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATTTCCGGGTGTAGCGAA CACTGGGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAACAAAAACATGCAAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGCACATTCTGTTGAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTGGAAAC                                                ]
[-] EMBL CNS09PN8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCCAATCACGTGACACATAGCGCATCGGTAGTATTTACAGAAGTTGGAGCAACGAAGAGGTTTTGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTTCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAAC AAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACGACAGAAAAACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATTACAGAAAAAAGAATAGCCAACCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATTTCCGGGTGTAGCGAAGGACT GGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAACAAAAACATGCAAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGCACATTCTGTTGAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTTGAAACATAATAAATGTTGCCATTGCTAAAAGGCTAACCGAAAAAAAAAAAAAA]
[+] EMBL BX625050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGAATAGCCAACCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATTTCCGGGTGTAGCGAAGCACT GGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACA                                                                                                                                                                                ]
[+] EMBL BX612054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACGAGAGAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGAATAGCCAATCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATTTCCGGGTGTAGCGAAGCACT GGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAACAAAAACATGCAAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGCACATTCTGTTGAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTTGAAACATAATAAATGTTGCCATTG                             ]




>consensus_8439#0
CCGCGGAACGGCTTCGCTCGGCATTCTTCTTGCCCGCTACTTCCGCCAGACCTGGGTTGG
CAGTCAGATGTGCGGCAAAGATCAGTGGTTTGCGTGGCATCGATTCCTGATGATTGTCAC
GTGGGCCCTCACAGTCGCAGGTATTGTGGTAATTTTTGTTGAAATCGGAGGCTGGTCGCA
GGTTCGCAATCCTCACGCCATTCTCGGCATCGTCACGACTGTACTGTGCTTCCTGCAACC
CATCGGTGCATTCTTCCGGCCACATCCGGGCTCGAGCAAGCGGCCCATCTTCAACTGGCT
GCACTGGTTGGGTGGCAATCTGGCGCACGTGATCGCGATCGTTGCTATCTTCTTTGCCGT
ACAGCTGCAGAAGGCGGAACTGCCCGAGTGGATGGACTTTATCCTTGTCGCGTTCGTCGC
CTTCCACGTGTTTATGCATCTGATTTTCTCCATCGGTGGTTGCGTGAGCGAGCGAAGAAG
TGGCCAGCGTGTGACGTCCTTCCCAATGGCCGATATGACTCCGTCGCGAAATTCCATGAG
CTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCT
GTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTCCTAGCGCC
GATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCG
AAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGC
GTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCT
ATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAA
ACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCG
CATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAA
TCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGT
TCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTT
TTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAA
AACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGAGAGAAAAACA
ACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGCTCTCCCTTCG
ATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGAATAGCCAACC
ACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGGAATGAGGAGT
TGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTCCTAGATCATT
TCCGGGTGTAGCGAAGCACTGGTCTGCACCAGTGAGTATACACTGTTTATGTTTGTATTT
TGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAAGCTTTCGCTG
GTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAACAAAAACATGC
AAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGCACATTCTGTT
GAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTTGAAACATAATAAATGTTGCCATTGCT
AAAAGGCTAACCGAAAAAAAAAAAAAA

consensusID : consensus_8439#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence

                              [CCGCCCACGCGTCCGTCCGTCGCGAAATTCCATGAGCTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCTGTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTTCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAATTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTGATAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCCCTATTGTAAGTGGTACTTATGATGATCGTTTTTTCTGGAAAGTGTA]

[+] EMBL BM630901             [CCGCCCACGCGTCCGTCCGTCGCGAAATTCCATGAGCTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCTGTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTTCTAGCGCCGATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAATTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTGATAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCCCTATTGTAAGTGGTACTTATGATGATCGTTTTTTCTGGAAAGTGTA]




>consensus_8439#1
CCGCCCACGCGTCCGTCCGTCGCGAAATTCCATGAGCTCCAGCGAACGGAAACAGGATGC
TGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCTGTACATACTGATCGTGCTCGGACT
GGTCATTGCGATGGTGGTGATTGTCGTTCTAGCGCCGATTGAAGCCGCTTACAACAGTAT
CAAGGATCAGATTATGAACTAAAGCGCATGTCATCGAAACGGTGATGTAGCGCATTAATC
TAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGA
TGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTC
TAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGA
AGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAATT
GGAGCAACGAAGAGGTTATGTTGCGCAGATTTGATAATCGATGTTGTAGATATCAGTTCC
ATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTT
CCCCTATTGTAAGTGGTACTTATGATGATCGTTTTTTCTGGAAAGTGTA

consensusID : consensus_8439#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence

                              [ATCGCCGAGGTAACTAAGCGCATGTATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACTCAAACAATTCAAACCGCTCAAAAAGAAGCTAATCGCTCGATGCGAATCATGTGACACATAGCGCATCGGTAGCATTGATAGAAGTAGGAGCAACGAAGAGGTTATGTTGAAGAGGTGTGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCA]

[+] EMBL AL930437             [ATCGCCGAGGTAACTAAGCGCATGTATCGAAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACTCAAACAATTCAAACCGCTCAAAAAGAAGCTAATCGCTCGATGCGAATCATGTGACACATAGCGCATCGGTAGCATTGATAGAAGTAGGAGCAACGAAGAGGTTATGTTGAAGAGGTGTGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCA]




>consensus_8439#2
ATCGCCGAGGTAACTAAGCGCATGTATCGAAACGGTGATGTAGCGCATTAATCTAAACGG
TGCAAGTAACCCGGAAAGCAAATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAA
ATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGG
TCAGTAGTGGAAAGAAAAAAAAAAACTCAAACAATTCAAACCGCTCAAAAAGAAGCTAAT
CGCTCGATGCGAATCATGTGACACATAGCGCATCGGTAGCATTGATAGAAGTAGGAGCAA
CGAAGAGGTTATGTTGAAGAGGTGTGCAGATTTACTAATCGATGTTGTAGATATCAGTTC
CATCTTTCTTCCCATCAACTTTCCATTGCCGTCCTTGTTCTCCTTTGCCCATTCCCCGTT
TCCTCTATTGTAAGTGGTACTTATGATGATCGTTTTTTTCTGGAAAGTGTATTATTTGTC
GAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAAAACTCAGACAGCGTCTAATCA

consensusID : consensus_8439#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence

                              [CAGATCGGCACGTNGATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTATNTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAA]

[+] EMBL BX468120             [CAGATCGGCACGTNGATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGATCGTTATNTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGAAGAAACAAAA]




>consensus_8439#3
CAGATCGGCACGTNGATGAGAGCGTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGT
ACATGTTGGATGGTTTGTGTGCTATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTA
GTGGAAAGAAAAAAAAAACGCAAACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGA
TGCGAATCACGTGACACATAGCGCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAG
GTTATGTTGCGCAGATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTT
CAACTTTCCATTGCCGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGT
GGTACTTATGATGATCGTTATNTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGA
AGGGCAGAAGATGAAGAAACAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CCGCGGAACGGCTTCGCTCGGCATTCTTCTTGCCCGCTACTTCCGCCAGACCTGGGTTGG 60
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CAGTCAGATGTGCGGCAAAGATCAGTGGTTTGCGTGGCATCGATTCCTGATGATTGTCAC 120
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GTGGGCCCTCACAGTCGCAGGTATTGTGGTAATTTTTGTTGAAATCGGAGGCTGGTCGCA 180
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GGTTCGCAATCCTCACGCCATTCTCGGCATCGTCACGACTGTACTGTGCTTCCTGCAACC 240
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CATCGGTGCATTCTTCCGGCCACATCCGGGCTCGAGCAAGCGGCCCATCTTCAACTGGCT 300
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GCACTGGTTGGGTGGCAATCTGGCGCACGTGATCGCGATCGTTGCTATCTTCTTTGCCGT 360
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      ACAGCTGCAGAAGGCGGAACTGCCCGAGTGGATGGACTTTATCCTTGTCGCGTTCGTCGC 420
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CTTCCACGTGTTTATGCATCTGATTTTCTCCATCGGTGGTTGCGTGAGCGAGCGAAGAAG 480
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      TGGCCAGCGTGTGACGTCCTTCCCAATGGCCGATATGACTCCGTCGCGAAATTCCATGAG 540
consensus_8439#1      ------------------------CCGCCCACGCGTCCGTCCGTCGCGAAATTCCATGAG 36
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCT 600
consensus_8439#1      CTCCAGCGAACGGAAACAGGATGCTGCTTTCTCGGGCTTCCGTAAGTCGATGCTATTCCT 96
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTCCTAGCGCC 660
consensus_8439#1      GTACATACTGATCGTGCTCGGACTGGTCATTGCGATGGTGGTGATTGTCGTTCTAGCGCC 156
                                                                                  

consensus_8439#2      ------------------------------ATCGCCGAGGTAACTAAGCGCATGT-ATCG 29
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCG 720
consensus_8439#1      GATTGAAGCCGCTTACAACAGTATCAAGGATCAGATTATGAACTAAAGCGCATGTCATCG 216
                                                                                  

consensus_8439#2      AAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGC 89
consensus_8439#3      -------------------------------------CAGATCGGCACGTNGATGAGAGC 23
consensus_8439#0      AAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGC 780
consensus_8439#1      AAACGGTGATGTAGCGCATTAATCTAAACGGTGCAAGTAACCCGGAAAGCAAATGAGAGC 276
                                                            *   *** * *   ********

consensus_8439#2      GTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCT 149
consensus_8439#3      GTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCT 83
consensus_8439#0      GTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCT 840
consensus_8439#1      GTCCATCTGTTAACTGATAAGTGATGTAAAAATGTGTACATGTTGGATGGTTTGTGTGCT 336
                      ************************************************************

consensus_8439#2      ATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACTCA 209
consensus_8439#3      ATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAA-CGCA 142
consensus_8439#0      ATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAA-CGCA 899
consensus_8439#1      ATCACTATTCTAGAGAGCAATTTCTAGCGGGTCAGTAGTGGAAAGAAAAAAAAAAACGCA 396
                      ******************************************************* * **

consensus_8439#2      AACAATTCAAACCGCTCAAAAAGAAGCTAATCGCTCGATGCGAATCATGTGACACATAGC 269
consensus_8439#3      AACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGC 202
consensus_8439#0      AACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGC 959
consensus_8439#1      AACAATTCAAACCGCTCAAAATGAAGCTAATCGCTCGATGCGAATCACGTGACACATAGC 456
                      ********************* ************************* ************

consensus_8439#2      GCATCGGTAGCATTGATAGAAGTAGGAGCAACGAAGAGGTTATGTTGAAGAGGTGTGCAG 329
consensus_8439#3      GCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTG--------CGCAG 254
consensus_8439#0      GCATCGGTAGTATTGACAGAAGTTGGAGCAACGAAGAGGTTATGTTG--------CGCAG 1011
consensus_8439#1      GCATCGGTAGTATTGACAGAAATTGGAGCAACGAAGAGGTTATGTTG--------CGCAG 508
                      ********** ***** **** * ***********************         ****

consensus_8439#2      ATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGC 389
consensus_8439#3      ATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGC 314
consensus_8439#0      ATTTACTAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCTTCAACTTTCCATTGC 1071
consensus_8439#1      ATTTGATAATCGATGTTGTAGATATCAGTTCCATCTTTCTTCCCATCAACTTTCCATTGC 568
                      ****  ************************************** ***************

consensus_8439#2      CGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGA 449
consensus_8439#3      CGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGA 374
consensus_8439#0      CGTCCTTGTTCTCCTTTACCCATTCCCCGTTTCCTCTATTGTAAGTGGTACTTATGATGA 1131
consensus_8439#1      CGTCCTTGTTCTCCTTTGCCCATTCCCCGTTTCCCCTATTGTAAGTGGTACTTATGATGA 628
                      ***************** **************** *************************

consensus_8439#2      TCGTT--TTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGA 507
consensus_8439#3      TCGTTATNTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGA 434
consensus_8439#0      TCGTT-TTTTTTCTGGAAAGTGTATTATTTGTCGAGAAGTGAACGAAGGGCAGAAGATGA 1190
consensus_8439#1      TCGTT---TTTTCTGGAAAGTGTA------------------------------------ 649
                      *****   ****************                                    

consensus_8439#2      AGAAACAAAAAACTCAGACAGCGTCTAATCA----------------------------- 538
consensus_8439#3      AGAAACAAAA-------------------------------------------------- 444
consensus_8439#0      AGAAACAAAAAACTCAGACAGCGTCTAATCAATCCCACAGAACAAAAAAACTCAACGAGA 1250
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GAGAAAAACAACGACAGAAACACAAGCATCGAAAGAGGAAAGGTCGTGCGTTTGGTACGC 1310
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      TCTCCCTTCGATACTGAGATGTACAGAATTAGGTGTGAAATATTTATAACAGAAAAAAGA 1370
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      ATAGCCAACCACAGGCAGAAAAACAAGCTGTGCCTTGTCGGCCGGGTGTGCCTTGAAAGG 1430
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      AATGAGGAGTTGTAGCATTTTTGTAAAAGTTTGCTTTGTGTAAGATTATTTCCGTCCGTC 1490
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      CTAGATCATTTCCGGGTGTAGCGAAGCACTGGTCTGCACCAGTGAGTATACACTGTTTAT 1550
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GTTTGTATTTTGTGCGCTATTTGCAGTCGTTCAATAATTTCCGTGTATCAATTTATTTAA 1610
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      GCTTTCGCTGGTGCGTTTGCCCAGTGCCAGCAGCAGCAACATACTATTTGGCTTCAAAAC 1670
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      AAAAACATGCAAAACAAACGCAAAAACCAGTACTGTATTATGCAAGACGAAAAACGCTGC 1730
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      ------------------------------------------------------------
consensus_8439#3      ------------------------------------------------------------
consensus_8439#0      ACATTCTGTTGAGGCAGGCTTACTTTTTAAAGCGTACTTAAGTTGAAACATAATAAATGT 1790
consensus_8439#1      ------------------------------------------------------------
                                                                                  

consensus_8439#2      -------------------------------------
consensus_8439#3      -------------------------------------
consensus_8439#0      TGCCATTGCTAAAAGGCTAACCGAAAAAAAAAAAAAA 1827
consensus_8439#1      -------------------------------------