cluster # 8457

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Anopheles gambiae
cluster # 8457 cluster # 8457 Sequences # 10 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8457#0 length = 950 sequences # 1
consensus_8457#1 length = 676 sequences # 3
consensus_8457#2 length = 617 sequences # 2

consensus_8457#3 length = 581 sequences # 1
consensus_8457#4 length = 563 sequences # 1
consensus_8457#5 length = 331 sequences # 1
consensus_8457#6 length = 140 sequences # 1

consensusID : consensus_8457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 950
fasta sequence

                              [CAGAATCGCCACGAGGTGTGCAGAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGTTTGTGGCGACGGAGAGTCAGTGCCATTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTGTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTAGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGGCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGGTTTGCATCGGATTTGGGACAATCTTTCAGGTGGATCTAACAAGTGCCTGTGGTGTTCGGTCNGTACGAAGAATTGGGTACGACATCAGTGCGTTGGCCGGGCGAGCNGAATGGGGTACACAACAAGGTCCCTGGCTGGCCGGTTCCCACAGTACCAAACTCCCTTGTTNTTCCGGAAGGGTTCCGGGCGCAATAGANCTAGAGCAGAACGGTTGACCTTGGTCCGACACAGTTGGCACAATCCGGGCCCTNGTCTGNNTGGGGTAAGAAGACCTCTGGGGCACG]

[+] EMBL BX468448             [CAGAATCGCCACGAGGTGTGCAGAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGTTTGTGGCGACGGAGAGTCAGTGCCATTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTGTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTAGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGGCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGGTTTGCATCGGATTTGGGACAATCTTTCAGGTGGATCTAACAAGTGCCTGTGGTGTTCGGTCNGTACGAAGAATTGGGTACGACATCAGTGCGTTGGCCGGGCGAGCNGAATGGGGTACACAACAAGGTCCCTGGCTGGCCGGTTCCCACAGTACCAAACTCCCTTGTTNTTCCGGAAGGGTTCCGGGCGCAATAGANCTAGAGCAGAACGGTTGACCTTGGTCCGACACAGTTGGCACAATCCGGGCCCTNGTCTGNNTGGGGTAAGAAGACCTCTGGGGCACG]




>consensus_8457#0
CAGAATCGCCACGAGGTGTGCAGAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATA
GCTGTTTGTGGCGACGGAGAGTCAGTGCCATTTGTCGGCATTCGGATTGTGTTTGTTGCG
ATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTGTTGTCATTCGCACTTTTTG
AGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGT
GAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTC
TCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCC
CCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAA
CGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGT
CACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCC
TGCTGGGTTCGCTGGCGTTTAGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAG
GCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACC
GTCGGGTTTGCATCGGATTTGGGACAATCTTTCAGGTGGATCTAACAAGTGCCTGTGGTG
TTCGGTCNGTACGAAGAATTGGGTACGACATCAGTGCGTTGGCCGGGCGAGCNGAATGGG
GTACACAACAAGGTCCCTGGCTGGCCGGTTCCCACAGTACCAAACTCCCTTGTTNTTCCG
GAAGGGTTCCGGGCGCAATAGANCTAGAGCAGAACGGTTGACCTTGGTCCGACACAGTTG
GCACAATCCGGGCCCTNGTCTGNNTGGGGTAAGAAGACCTCTGGGGCACG

consensusID : consensus_8457#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 676
fasta sequence

                              [CCGGTGGAAGCATGCGTGTGCTTCGTACCGCGTGAGACACTCGTTCGGTGTGTGTTCGTGTCCGTGTCTCTGTGTACGCGCGCGTGTTTGTGCCCCTGGTTTACACGAGCTTGGAGCTTGGTCTGCTTTTCCGTGTTTGGCCGTTTTGG-TTTT-CCCCCCTAAGGTGCATGTGTG-TT---GAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGCTTGTGGCGACGGAGAGTCAGTGCCAGTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTTTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGGTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGTAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGTTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTTGTGCTAC]

[+] EMBL BM585804             [CCGGTGGAAGCATGCGTGTGCTTCGTACCGCGTGAGACACTCGTTCGGTGTGTGTTCGTGTCCGTGTCTCTGTGTACGCGCGCGTGTTTGTGCCCCTGGTGTACACGAGCTTG  GTTTTGTCTGCTTTTCCGTGTTTGTCCGTTTTGGTTTTT CCCCCCTAAGG    TGTGT  TT   GAGGTGTTAGAAGAGGTGTGTCCGCGTCGATTTGAATAGCTACTTGTGGCGACGGAGAGTCAGTGCCAGTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTTTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGGTACACCTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGTAGCGGATTCCTAGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTGCTGAGTGCGGACTGTATGTTCATAACAGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGTTCTTGGTTCCAGTCACGATGCTTCCTGG                           ]
[+] EMBL BM633616             [ ccGTGGAAGCATGCGTGTGCTTCGTACCGCGTGAGACACTCGTTCGGTGTGTGTTCGTGTCCGTGTCTCTGTGTACGCGCGCGTGTTTGTGCCCCTGGTTTACACGAGCTTGGAGCTTGGTCTGCTTTTCCGTGTTTGGCCGTTTTGG TTTT  CCCCCTAAGGTGCATGTGTGTTT   GAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGCTTGTGGCGACGGAGAGTCAGTGCCAGTTGTCGGCATTCGGATTGCGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTTTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCATCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGGTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGTAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGTTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTTGTGCTAC]
[+] EMBL BM652558             [                                                                      ccgGTACGCGCGCGTGTTTGTGCCCCTGGTTTACACGAGCTTGGAGCTTGGTCTGCTTTTCCGTGTTTGGCCGTTTTGG TTTTCCCCCCCTAAGGTGCATGTGTG TTGCAGAGGTGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGTTTGTGGCGACGGAGAGTCAGTGCCATTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTTGGGTGCAATTGGCTGTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTTCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGA TTACTTTACGCTGGTGGTGCT  ]




>consensus_8457#1
CCGGTGGAAGCATGCGTGTGCTTCGTACCGCGTGAGACACTCGTTCGGTGTGTGTTCGTG
TCCGTGTCTCTGTGTACGCGCGCGTGTTTGTGCCCCTGGTTTACACGAGCTTGGAGCTTG
GTCTGCTTTTCCGTGTTTGGCCGTTTTGGTTTTCCCCCCTAAGGTGCATGTGTGTTGAGG
TGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGCTTGTGGCGACGGAGAGTCAGT
GCCAGTTGTCGGCATTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAGCTT
GGGTGCAATTGGCTTTTGTCATTCGCACTTTTTGAGGTGTTCTCCGTGTCTAACCTCAGC
TAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACGATGGGCAGTACGGGGTACACG
TGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGTAGCGGATTC
CTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGAC
CATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATC
GCGTTCTTCGGTTGCTGCGGTTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTT
ACGCTGGTTGTGCTAC

consensusID : consensus_8457#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 617
fasta sequence

                              [GGTTAGCAGCACAGTTGGTGTTGTTGTTGTGCCTGCCCTTTGCTCTTACTGGTTGATCTAGCAGGCGAGCATTTCGGGCGAGTGTGTGCATGCGTTTTGTTTCGCTGTGTGTGTTGGTGTATAACAACAACAAACAAACGATAGAAGTAATCGTCATCAAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTGGGACAATCTTCAGGTGGATCTAC]

[+] EMBL BX603779             [GGTTAGCAGCACAGTTGGTGTTGTTGTTGTGCCTGCCCTTTGCTCTTACTGGTTGATCTAGCAGGCGAGCATTTCGGGCGAGTGTGTGCATGCGTTTTGTTTCGCTGTGTGTGTTGGTGTATAACAACAACAAACAAACGATAGAAGTAATCGTCATCAAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTGGGACAATCTTCAGGTGGATCTAC]
[+] EMBL AGA285276            [                                                                                                                                                               AACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTG                       ]




>consensus_8457#2
GGTTAGCAGCACAGTTGGTGTTGTTGTTGTGCCTGCCCTTTGCTCTTACTGGTTGATCTA
GCAGGCGAGCATTTCGGGCGAGTGTGTGCATGCGTTTTGTTTCGCTGTGTGTGTTGGTGT
ATAACAACAACAAACAAACGATAGAAGTAATCGTCATCAAACGATGGGCAGTACGGGCTA
CACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGCTCTGTGGCAGCGG
ATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCC
GGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGT
GATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTA
CTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGT
GTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAGCA
CTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTGGGACAA
TCTTCAGGTGGATCTAC

consensusID : consensus_8457#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence

                              [CAGCAGAATCGCCCGCAGGTNGATACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGATCGAGAAGCACTACAATGTGTCGGACCGGGGCCGGATTCCTCACACCGTCGCGTTGCATCGATTTGGGGACAATCTTCAGGTGCGATCTACAATGCTGTGGTGTTTCGTCGTAACCGAAGATTGGTACGACATCAGTGCGTGGCCGGGCGACGCGATGGGTACCACAGTACCTGCTGCCGTTTCCCAGTACACAATCCCTGTATTCCGNAGAGGTTCCGGGCGATTGAGGCCTACGCGAACGTTGACTGTCCGGAAAGCTGGCAATCCGGGCCTGCTGTGGGATAANAGCTGTGGTCAGATTCTTCAGATCGTGGGTATCGTACAGGCGGGTTTCCATAT]

[+] EMBL AL696566             [CAGCAGAATCGCCCGCAGGTNGATACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGATCGAGAAGCACTACAATGTGTCGGACCGGGGCCGGATTCCTCACACCGTCGCGTTGCATCGATTTGGGGACAATCTTCAGGTGCGATCTACAATGCTGTGGTGTTTCGTCGTAACCGAAGATTGGTACGACATCAGTGCGTGGCCGGGCGACGCGATGGGTACCACAGTACCTGCTGCCGTTTCCCAGTACACAATCCCTGTATTCCGNAGAGGTTCCGGGCGATTGAGGCCTACGCGAACGTTGACTGTCCGGAAAGCTGGCAATCCGGGCCTGCTGTGGGATAANAGCTGTGGTCAGATTCTTCAGATCGTGGGTATCGTACAGGCGGGTTTCCATAT]




>consensus_8457#3
CAGCAGAATCGCCCGCAGGTNGATACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGT
GATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTT
CCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTC
GCTGGCGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGG
ATCGAGAAGCACTACAATGTGTCGGACCGGGGCCGGATTCCTCACACCGTCGCGTTGCAT
CGATTTGGGGACAATCTTCAGGTGCGATCTACAATGCTGTGGTGTTTCGTCGTAACCGAA
GATTGGTACGACATCAGTGCGTGGCCGGGCGACGCGATGGGTACCACAGTACCTGCTGCC
GTTTCCCAGTACACAATCCCTGTATTCCGNAGAGGTTCCGGGCGATTGAGGCCTACGCGA
ACGTTGACTGTCCGGAAAGCTGGCAATCCGGGCCTGCTGTGGGATAANAGCTGTGGTCAG
ATTCTTCAGATCGTGGGTATCGTACAGGCGGGTTTCCATAT

consensusID : consensus_8457#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 563
fasta sequence

                              [GATCGCCCGAGGTTAATAGCTTTGTCTAGAATCCGAGAAGGTGCTGGTGGTGGTGGATGAACACAGAATGGACATGCTTTTAACATTTCCCTTTTCATCATTGCTTTTGCAGAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGGTACGTGCAGCATTAATTCTTGTGTTTCATGATAGTTAATCGATATTTCCGATATTTTTCCGAACACAGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTCGGCGTTCGCTGGCGTTCGTGTTCCGCGCGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAG]

[+] EMBL AL694111             [GATCGCCCGAGGTTAATAGCTTTGTCTAGAATCCGAGAAGGTGCTGGTGGTGGTGGATGAACACAGAATGGACATGCTTTTAACATTTCCCTTTTCATCATTGCTTTTGCAGAACGATGGGCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGGTACGTGCAGCATTAATTCTTGTGTTTCATGATAGTTAATCGATATTTCCGATATTTTTCCGAACACAGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTCGGCGTTCGCTGGCGTTCGTGTTCCGCGCGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGGCATCGAGAAG]




>consensus_8457#4
GATCGCCCGAGGTTAATAGCTTTGTCTAGAATCCGAGAAGGTGCTGGTGGTGGTGGATGA
ACACAGAATGGACATGCTTTTAACATTTCCCTTTTCATCATTGCTTTTGCAGAACGATGG
GCAGTACGGGCTACACGTGCATAAGGCGGACGTTTTGTTCCTTCAACATTCTCATATGGG
TACGTGCAGCATTAATTCTTGTGTTTCATGATAGTTAATCGATATTTCCGATATTTTTCC
GAACACAGCTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCC
CCGGGTATGCCACGCTGCTGCCGGACCATGCCGTACTGAGTGCGGACTGTATGTTCATAA
CGGTCGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGT
CACGATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCC
TGCTCGGCGTTCGCTGGCGTTCGTGTTCCGCGCGAGGCATTGGCCGCATGCTAACCCAGG
AGCTGAAGTACGGCATCGAGAAG

consensusID : consensus_8457#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 331
fasta sequence

                              [AGAATCGCCACGAGGTTGACGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAACTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTGGGACAATCTTCAGGTGGATCTACAATGCTGTGGTGTTTCGTCGTACGAAGATTGGTACGACATCAGTGCGTGGCCGGGCGAGCGATGGGTACCACAGTCCTGCTGCCGTTCCCAGTACAACTCCCTGTTTTCGGAGGGTTCCGGCGATGAGCTAGCGAACGTGACTGTCGGAAAGCTGGCAATCCGGGCCT]

[+] EMBL BX466509             [AGAATCGCCACGAGGTTGACGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAGGAACTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCGTCGGTTGCATCGATTTGGGACAATCTTCAGGTGGATCTACAATGCTGTGGTGTTTCGTCGTACGAAGATTGGTACGACATCAGTGCGTGGCCGGGCGAGCGATGGGTACCACAGTCCTGCTGCCGTTCCCAGTACAACTCCCTGTTTTCGGAGGGTTCCGGCGATGAGCTAGCGAACGTGACTGTCGGAAAGCTGGCAATCCGGGCCT]




>consensus_8457#5
AGAATCGCCACGAGGTTGACGTTTGTGTTCCGCGGAGGCATTGGCCGCATGCTAACCCAG
GAACTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACA
CCGTCGGTTGCATCGATTTGGGACAATCTTCAGGTGGATCTACAATGCTGTGGTGTTTCG
TCGTACGAAGATTGGTACGACATCAGTGCGTGGCCGGGCGAGCGATGGGTACCACAGTCC
TGCTGCCGTTCCCAGTACAACTCCCTGTTTTCGGAGGGTTCCGGCGATGAGCTAGCGAAC
GTGACTGTCGGAAAGCTGGCAATCCGGGCCT

consensusID : consensus_8457#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 140
fasta sequence

                              [GTGCGGGGCCGGGCGAGCGATGGGTACCACAGTCCGGCTGCCGTTCCCAGTACAACTCCCGGATTTCGGAGGGTGCCGGCGATGAGCTAGCGAACGTTGACGGGCGGAAAGCTGGCAATCCGGCCCGGCCGTGGGATAAG]

[+] EMBL BX614385             [GTGCGGGGCCGGGCGAGCGATGGGTACCACAGTCCGGCTGCCGTTCCCAGTACAACTCCCGGATTTCGGAGGGTGCCGGCGATGAGCTAGCGAACGTTGACGGGCGGAAAGCTGGCAATCCGGCCCGGCCGTGGGATAAG]




>consensus_8457#6
GTGCGGGGCCGGGCGAGCGATGGGTACCACAGTCCGGCTGCCGTTCCCAGTACAACTCCC
GGATTTCGGAGGGTGCCGGCGATGAGCTAGCGAACGTTGACGGGCGGAAAGCTGGCAATC
CGGCCCGGCCGTGGGATAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      CCGGTGGAAGCATGCGTGTGCTTCGTACCGCGTGAGACACTCGTTCGGTGTGTGTTCGTG 60
consensus_8457#0      ------------------------------------------------------------
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      TCCGTGTCTCTGTGTACGCGCGCGTGTTTGTGCCCCTGGTTTACACGAGCTTGGAGCTTG 120
consensus_8457#0      ------------------------------------------------------------
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ---------------------------------------------CAGCAGAATCGCCCG 15
                                                                                  

consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      GTCTGCTTTTCCGTGTTTGGCCGTTTTGGTTTTCCCCCCTAAGGTGCATGTGTGTTGAGG 180
consensus_8457#0      ----------------------------------CAGAATCGCCACGAGGTGTGCAGAGG 26
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      CAGGTNGATACTGAGTGCGGACTGTATGTTCATAACGGTCGGTGTGATCAGCTTCGTGAT 75
                                                                                  

consensus_8457#2      ------------------------------------------GGTTAGCAGCACAGTTGG 18
consensus_8457#4      ------------------------------------------GATCGCC--CGAGGTTAA 16
consensus_8457#1      TGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGCTTGTGGCGAC-GGAGAGTCAG 239
consensus_8457#0      TGTTAGAAGAGGTGTGTCCGTGTCGGTTTGAATAGCTGTTTGTGGCGAC-GGAGAGTCAG 85
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      CGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACGATGCTTCCTGGTGATTTACTT 135
                                                                                  

consensus_8457#2      TGTT-GTTGTTGTG---CCTGCCCTTTGCTCTTACTGGT---TGATCTA-GCAGG-CGAG 69
consensus_8457#4      TAGC-TTTGTCTAGAATCCGAGAAGGTGCTGGTGGTGGT---GGATGAACACAGAATGGA 72
consensus_8457#1      TGCCAGTTGTCGGCA--TTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAG 297
consensus_8457#0      TGCCATTTGTCGGCA--TTCGGATTGTGTTTGTTGCGATCTGGGTGGCGGACAATTCCAG 143
consensus_8457#5      -------------------------------AGAATCGCCACGAGGTTGACGTTTGTGTT 29
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      TACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCTGGGTTCGCTGGCGTTTGTGTT 195
                                                                                  

consensus_8457#2      CAT--TTCGGGCGAGTGTGTGCATGCGTTTTGTTTCGCTGTGTGTGTTGGTGTATAACAA 127
consensus_8457#4      CATGCTTTTAACATTTCCCTTTTCATCATTGCTTTTGCAGAACGATGGGCAGTACGGGCT 132
consensus_8457#1      CTTGGGTGCAATTGGCTTTTGTCATTCGCACTTTTTGAGGTGTTCTCCG-TGTCTAACCT 356
consensus_8457#0      CTTGGGTGCAATTGGCTGTTGTCATTCGCACTTTTTGAGGTGTTCTCCG-TGTCTAACCT 202
consensus_8457#5      CCGCGGAGGCATTGGCCGCATGCTAACCCAGGAACTGAAGTACGGCATCGAGAAGCACTA 89
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      CCGCGGAGGCATTGGCCGCATGCTAACCCAGGAGCTGAAGTACGG-ATCGAGAAGCACTA 254
                                                                                  

consensus_8457#2      CAACAAACAAACG-ATAGAAGTAATCGTCATCAAACG-------ATGGGCA-GTACGGGC 178
consensus_8457#4      ACACGTGCATAAG-GCGGACGTTTTGTTCCTTCAACATTCTCATATGGGTACGTGCAGCA 191
consensus_8457#1      CAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACG-ATGGGCA-GTACGGGG 414
consensus_8457#0      CAGCTAACCTCCGTGTCTAACCAGCATACCCTTGGAGTGAACG-ATGGGCA-GTACGGGC 260
consensus_8457#5      CAATGTGTCGGACCGGGGC-GGATTCCTCACACCGTCG-GTTGCATCGATTTGGG-ACAA 146
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      CAATGTGTCGGACCGGGGCCGGATTCCTCACACCGTCGCGTTGCATCGATTTGGGGACAA 314
                                                                                  

consensus_8457#2      T--ACACGTGCAT---AAGGCGGACGTTTTGTTCCTTCAAC---ATTCTC----ATATGG 226
consensus_8457#4      TTAATTCTTGTGTTTCATGATAGTTAATCGATATTTCCGAT---ATTTTTCCGAACACAG 248
consensus_8457#1      T--ACACGTGCAT---AAGGCGGACGTTTTGTTCCTTCAAC---ATTCTC----ATATGG 462
consensus_8457#0      T--ACACGTGCAT---AAGGCGGACGTTTTGTTCCTTCAAC---ATTCTC----ATATGG 308
consensus_8457#5      TCTTCAGGTG-GATCTACAATGCTGTGGTGTTTCGTCGTA--CGAAGATTGGTACGACAT 203
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      TCTTCAGGTGCGATCTACAATGCTGTGGTGTTTCGTCGTAACCGAAGATTGGTACGACAT 374
                                                                                  

consensus_8457#2      CTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTAT 286
consensus_8457#4      CTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTAT 308
consensus_8457#1      CTCTGTGGTAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTAT 522
consensus_8457#0      CTCTGTGGCAGCGGATTCCTGGCGATAGGCGTTTGGCTCCACTTTGCCTTCCCCGGGTAT 368
consensus_8457#5      CAGTGCGTGGCCGGGCGA---GCGATGGGTACCACAGT-CCTGCTGCCGTT-CCCAGTAC 258
consensus_8457#6      --GTGCGGGGCCGGGCGA---GCGATGGGTACCACAGT-CCGGCTGCCGTT-CCCAGTAC 53
consensus_8457#3      CAGTGCGTGGCCGGGCGAC--GCGATGGGTACCACAGTACCTGCTGCCGTTTCCCAGTAC 432
                         ** *    ***       ***** **        * *    **** *  **  *** 

consensus_8457#2      G--CCACGCTGCTGCCGGAC-CATGCCGTACTGAGTGCGGACTGTATGTTCAT-AACGGT 342
consensus_8457#4      G--CCACGCTGCTGCCGGAC-CATGCCGTACTGAGTGCGGACTGTATGTTCAT-AACGGT 364
consensus_8457#1      G--CCACGCTGCTGCCGGAC-CATGCCGTACTGAGTGCGGACTGTATGTTCAT-AACGGT 578
consensus_8457#0      G--CCACGCTGCTGCCGGAC-CATGCCGTACTGAGTGCGGACTGTATGTTCAT-AACGGT 424
consensus_8457#5      A--ACTCCCTGTTTTCGGAG-GGTTCCGG--CGAT---GAGCTA-GCGAACGT-GACTGT 308
consensus_8457#6      A--ACTCCCGGATTTCGGAG-GGTGCCGG--CGAT---GAGCTA-GCGAACGTTGACGGG 104
consensus_8457#3      ACAATCCCTGTATTCCGNAGAGGTTCCGGG-CGATTGAGGCCTACGCGAACGTTGACTGT 491
                            *     *  ** *    * ***    **    *  **    *  * *  ** * 

consensus_8457#2      CGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACG 402
consensus_8457#4      CGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACG 424
consensus_8457#1      CGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGTTCTTGGTTCCAGTCACG 638
consensus_8457#0      CGGTGTGATCAGCTTCGTGATCGCGTTCTTCGGTTGCTGCGGCTCTTGGTTCCAGTCACG 484
consensus_8457#5      C-GGAAAGCTGGCAATCCGGGCCT------------------------------------ 331
consensus_8457#6      C-GGAAAGCTGGCAATCCGGCCCGGCCGTGGGATAAG----------------------- 140
consensus_8457#3      CCGGAAAGCTGGCAATCCGGGCCTGCTGTGGGATAANAGCTGTGGTCAGATTCTTCAGAT 551
                      * *        **     *  *                                      

consensus_8457#2      ATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCT 462
consensus_8457#4      ATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCT 484
consensus_8457#1      ATGCTTCCTGGTGATTTACTTTACGCTGGTTGTGCTAC---------------------- 676
consensus_8457#0      ATGCTTCCTGGTGATTTACTTTACGCTGGTGGTGCTACTGTTCCTCAGTGAGTTCCTGCT 544
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      CGTGGGTATCGTACAGGCGGGTTTCCATAT------------------------------ 581
                                                                                  

consensus_8457#2      GGG--TTCGCTGGCGTTT-GTGTTCCGCG-GAGGCATTGGCCGCATGCTAACCCAGGAG- 517
consensus_8457#4      CGGCGTTCGCTGGCGTTC-GTGTTCCGCGCGAGGCATTGGCCGCATGCTAACCCAGGAG- 542
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      GGG--TTCGCTGGCGTTTAGTGTTCCGCG-GAGGCATTGGCCGCATGCTAACCCAGGAGG 601
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      CTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCG 577
consensus_8457#4      CTGAAGTACGGCATCGAGAAG--------------------------------------- 563
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      CTGAAGTACGGCATCGAGAAGCACTACAATGTGTCGGACCGGGGCGGATTCCTCACACCG 661
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      TCGGTTGCATC---GATTTGGGACAATCTT-CAGGTGGATCTAC---------------- 617
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      TCGGGTTTGCATCGGATTTGGGACAATCTTTCAGGTGGATCTAACAAGTGCCTGTGGTGT 721
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      TCGGTCNGTACGAAGAATTGGGTACGACATCAGTGCGTTGGCCGGGCGAGCNGAATGGGG 781
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      TACACAACAAGGTCCCTGGCTGGCCGGTTCCCACAGTACCAAACTCCCTTGTTNTTCCGG 841
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      ------------------------------------------------------------
consensus_8457#4      ------------------------------------------------------------
consensus_8457#1      ------------------------------------------------------------
consensus_8457#0      AAGGGTTCCGGGCGCAATAGANCTAGAGCAGAACGGTTGACCTTGGTCCGACACAGTTGG 901
consensus_8457#5      ------------------------------------------------------------
consensus_8457#6      ------------------------------------------------------------
consensus_8457#3      ------------------------------------------------------------
                                                                                  

consensus_8457#2      -------------------------------------------------
consensus_8457#4      -------------------------------------------------
consensus_8457#1      -------------------------------------------------
consensus_8457#0      CACAATCCGGGCCCTNGTCTGNNTGGGGTAAGAAGACCTCTGGGGCACG 950
consensus_8457#5      -------------------------------------------------
consensus_8457#6      -------------------------------------------------
consensus_8457#3      -------------------------------------------------