cluster # 8459

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8459 cluster # 8459 Sequences # 10 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8459#0 length = 1204 sequences # 4
consensus_8459#1 length = 913 sequences # 2
consensus_8459#2 length = 602 sequences # 1

consensus_8459#3 length = 570 sequences # 1
consensus_8459#4 length = 544 sequences # 1
consensus_8459#5 length = 381 sequences # 1

consensusID : consensus_8459#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1204
fasta sequence

                              [TCCTCGAGCACTGTTGGCCTACTGGTTGATTCCACACAGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTTACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCTACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTGTATTCTCTTTAGAATCCTGTTTCCTGCTAATCGTGCTCCACACGTGTGGCCAGAGATTTTTTTTTGTTGTAAGTTCGAGAACGCACACACGCCGCAAAGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTTGCTCGAGGCTTGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGAAAGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAACGCTAGCAATGTTTACTCTCGCCTCTGTCCCATCCAAGGGCACCGCTTTCCTTTTCATCTCATGGTTCAATATACGCAGTCAAAGTAGAGTTCCTCGAGTTGGTCTTGTAAAATAGCATAATATGTAAGACTCTTTGTATTGCTACGAAAAAGGTGGCCAAAACT-CGCGCTGTTGTGTACATAATAATCTTCCGTAGTATGTAAGTGCTGTACTGAGAGAAAAAAAACAGAAACCAGAGCAATAATCGTATAACTATGTATGTTTATTAACAACCATTACCAACCAATTCACATTATCTGCAAAAAAAAAATCAAAAACAAAAAACAATCTATTCGATAAAAGGTAAATGACATGAATTTTCCTCGTTTCTGCATTTTATAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGTACATACCCAATTAATACACGAAAACTGCAAAATATCCTATTACTGCAACGAAACTACTCTTTCCCTCCCACCCACAACATCACATGAGATTAACGGA]

[-] EMBL CNS0995J             [TCCTCGAGCACTGTTGGCCTACTGGTTGATTCCACACAGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTTACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCTACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX621585             [                                                                           GATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTGTATTCTCTTTAGAATCCTGTTTCCTGCTAATCGTGCTCCACACGTGTGGCCAGAGATTTTTTTTTGTTGTAAGTTCGAGAACGCACACACGCCGCAAAGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTTGCTCGAGGCTTGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGAAAGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAACGCTAGCAATGTTTACTCTCGCCTCTGTCCCATCCAAGGGCACCGCTTTCCTTTTCATCTCATGGTTCAATATACGCAGTCAAAGTAGAGTTCCTCGAGTTGGTCTTGTAAAATAGCATAATATGTAAGACTCTTTGTATTG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX623713             [                                                                                                                                                                                                                                                                      ATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTATATTCTCTTTAGAATCCTGTTTCTTGCTAATCGTGCTCCACACGTGTGGCCAGAGATATTTTTTTGTTGTAAGTTCGAGAACGCACACACGCTGCAATGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTCGCTCGAGGCTAGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGAAAGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAACGCTAGCAATGTTTACTCTCGCCTCTGTCCCATTCAAGGACACCGCTTTCCTTTTCATCTCATGGTTCAATATACGCAGTCNAAGTAGAATTCCTCGAGTTGGTCTTGTAAAATAGCATAATTTGTAAGACTCTTTGTATTGCTACGAAAAAGGTGGCCAAAACT                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM645531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAACGCTAGCAATGTTTACTCTCGCCTCTGTCCCATCCAAGGGCACCGCTTTCCTTTTCATCTCATGGTTCAATATACGCAGTCAAAGTAGAGTTCCTCGAGTTGGTCTTGTAAAATAGCATAATATGTAAGACTCTTTGTATTGCTACGAAAAAGGTGGCC AAACTGCGCGCTGTTGTGTACATAATAATCTTCCGTAGTATGTAAGTGCTGTACTGAGAGAAAAAAAACAGAAACCAGAGCAATAATCGTATAACTATGTATGTTTATTAACAACCATTACCAACCAATTCACATTATCTGCAAAAAAAAAATCAAAAACAAAAAACAATCTATTCGATAAAAGGTAAATGACATGAATTTTCCTCGTTTCTGCATTTTATAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGTACATACCCAATTAATACACGAAAACTGCAAAATATCCTATTACTGCAACGAAACTACTCTTTCCCTCCCACCCACAACATCACATGAGATTAACGGA]




>consensus_8459#0
TCCTCGAGCACTGTTGGCCTACTGGTTGATTCCACACAGTCCAACACAACAGCCAGCTGT
GAAATTCTTTCGTGCGATTTATTCCACATTTCGTTACACAATCGCGCTAAAAAAGCCACC
TTTGCGAAGAAAGTGATCCCCTGCATCGACAGCTACTGCAGTAGCTAAAGTGCATCCGCT
CATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAA
AGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAA
TCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTA
CATTTGTGCTGTGCGTGTGATTGTATTCTCTTTAGAATCCTGTTTCCTGCTAATCGTGCT
CCACACGTGTGGCCAGAGATTTTTTTTTGTTGTAAGTTCGAGAACGCACACACGCCGCAA
AGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGT
GTGTGAATGTTGCTCGAGGCTTGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGA
AAGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAACGCTAGC
AATGTTTACTCTCGCCTCTGTCCCATCCAAGGGCACCGCTTTCCTTTTCATCTCATGGTT
CAATATACGCAGTCAAAGTAGAGTTCCTCGAGTTGGTCTTGTAAAATAGCATAATATGTA
AGACTCTTTGTATTGCTACGAAAAAGGTGGCCAAAACTCGCGCTGTTGTGTACATAATAA
TCTTCCGTAGTATGTAAGTGCTGTACTGAGAGAAAAAAAACAGAAACCAGAGCAATAATC
GTATAACTATGTATGTTTATTAACAACCATTACCAACCAATTCACATTATCTGCAAAAAA
AAAATCAAAAACAAAAAACAATCTATTCGATAAAAGGTAAATGACATGAATTTTCCTCGT
TTCTGCATTTTATAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTG
TGTGTATTCAGCTTCCAAGACAAAGGTACATACCCAATTAATACACGAAAACTGCAAAAT
ATCCTATTACTGCAACGAAACTACTCTTTCCCTCCCACCCACAACATCACATGAGATTAA
CGGA

consensusID : consensus_8459#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 913
fasta sequence

                              [CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCACCTCACCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGAAAATGGTCATAGCAAATCCTCACGCCACCGCAGTCGTTCGCGCGAACGCGAAAGAGAACGTGAGCGGGACCGTGATCGTGAGCGCGACCGTGACCGGGAGCGTGAGCGTGACCGTGAACGCGATCGGGACGGTGATAAGGCCTCCAAAAAGCATCGCTCCGGTTCGCCCGGCCGTACCCGCGACAAGGAGCGCCGTCGCAGCAAGGATCGCAGCAAGTCCCGTTCGCCAGCGCGCCGCGACCGTTCGAAGGACCGCTCGAAGGAAAAGGACCGCGGCAAGAGCGATCACCATCGGCGGGAGGTAGTGGTTGAGAAGCGTCGATCTCGTGATCGCGTTGATCATCGGCGCCGCTCTCGCGAACGAGACTATCGCCGTCGCAGCCGCTCGAGGGACGGTGGACGGGGCATGGGCCGTGGCCGTCGCTCGATGTCCCCCAAACCCTACCGGGGAAGGGGACGAGGTGGCTCCGGCTACTACCGCGATCGATCGCCGCTGGAAGAGATGAGCCAGGAGGATCGGGATGCGCGTACCGTCTTCTGCATGCAGCTGTCC]

[+] EMBL BM610083             [CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCACCTCACCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGAAAATGGTCATAGCAAATCCTCACGCCACCGCAGTCGTTCGCGCGAACGCGAAAGAGAACGTGAGCGGGACCGTGATCGTGAGCGCGACCGTGACCGGGAGCGTGAGCGTGACCGTGAACGCGATCGGGACGGTGATAAGGCCTCCAAAAAGCATCGCTCCGGTTCGCCCGGCCGTACCCGCGACAAGGAGCGCCGTCGCAGCAAGGATCGCAGCAAGTCCCGTTCGCCAGCGCGCCGCGACCGTTCGAAGGACCGCTCGAAGGAAAAGGACCGCGGCAAGAGCGATCACCATCGGCGGGAGGTAGTGGTTGAGAAGCGT                                                                                                                                                                                                                                          ]
[+] EMBL BM630471             [                                                                                                                                                                                                                                                                                                                                                                         ccgGGCCATAGCAAATCCTCACGCCATCGCAGTCGTTCGCGCGAACGCGAAAGAGAACGTGAGCGGGACCGTGATCGTGAGCGCGACCGTGAACGGGAGCGTGAGCGTGACCGTGAACGCGATCGGGACGGTGAAAAGGCCTCCAAAAAGCATCGCTCCGGTTCGCCCGGCCGTAACCGCGACAAGGAGCGCCGTCGCAGCAAGGATCGCAGCAAGTCCCGTTCGCCAGCGCGCCGCGACCGTTCGAAGGACCGCTCGAAGGAAAAGGACCGCGGCAAGAGCGATCACCATCGGCGGGAGGTAGTGGTTGAGAAGCGGCGATCTCGTGATCGCGTTGATCATCGGCGCCGCTCTCGCGAACGAGACTATCGCCGTCGCAGCCGCTCGAGGGACGGTGGACGGGGCATGGGCCGTGGCCGTCGCTCGATGTCCCCCAAACCCTACCGGGGAAGGGGACGAGGTGGCTCCGGCTACTACCGCGATCGATCGCCGCTGGAAGAGATGAGCCAGGAGGATCGGGATGCGCGTACCGTCTTCTGCATGCAGCTGTCC]




>consensus_8459#1
CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTC
ACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGC
AACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTAC
CACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGA
TGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGA
TGCTGCCACCTCACCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGA
AAATGGTCATAGCAAATCCTCACGCCACCGCAGTCGTTCGCGCGAACGCGAAAGAGAACG
TGAGCGGGACCGTGATCGTGAGCGCGACCGTGACCGGGAGCGTGAGCGTGACCGTGAACG
CGATCGGGACGGTGATAAGGCCTCCAAAAAGCATCGCTCCGGTTCGCCCGGCCGTACCCG
CGACAAGGAGCGCCGTCGCAGCAAGGATCGCAGCAAGTCCCGTTCGCCAGCGCGCCGCGA
CCGTTCGAAGGACCGCTCGAAGGAAAAGGACCGCGGCAAGAGCGATCACCATCGGCGGGA
GGTAGTGGTTGAGAAGCGTCGATCTCGTGATCGCGTTGATCATCGGCGCCGCTCTCGCGA
ACGAGACTATCGCCGTCGCAGCCGCTCGAGGGACGGTGGACGGGGCATGGGCCGTGGCCG
TCGCTCGATGTCCCCCAAACCCTACCGGGGAAGGGGACGAGGTGGCTCCGGCTACTACCG
CGATCGATCGCCGCTGGAAGAGATGAGCCAGGAGGATCGGGATGCGCGTACCGTCTTCTG
CATGCAGCTGTCC

consensusID : consensus_8459#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 602
fasta sequence

                              [CCGACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGCTGATCTCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGATGATGCTGCCGCCTCGCCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAAT]

[+] EMBL BM617242             [CCGACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGCTGATCTCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGATGATGCTGCCGCCTCGCCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAAT]




>consensus_8459#2
CCGACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAG
CAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTA
CCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGG
ATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGACGA
TACTAATGTCAGGTTCCGGTATGAGTTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAG
ACAAAGGCTGATCTCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAA
AAATACACAAATACAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACAC
ACACCAAGATATCATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTG
TCCTCCCTAAAGAGGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAA
AAAAGATGATGCTGCCGCCTCGCCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAA
AT

consensusID : consensus_8459#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence

                              [CCGCCCACGCGTCCGCAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTATATTCTCTTTAGAATCCTGTTTCTTGCTAATCGTGCTCCACACGTGTGGCCAGAGATATTTTTTTGTTGTAAGTTCGAGAACGCACACACGCTGCAATGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTCGCTCGAGGCTAGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGAAA]

[+] EMBL BM618528             [CCGCCCACGCGTCCGCAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTATATTCTCTTTAGAATCCTGTTTCTTGCTAATCGTGCTCCACACGTGTGGCCAGAGATATTTTTTTGTTGTAAGTTCGAGAACGCACACACGCTGCAATGCTGTTTCAATAGATTGATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTCGCTCGAGGCTAGAAACGTAAAGCAGCCTGCTGCTGCATATGCTGATGGAAA]




>consensus_8459#3
CCGCCCACGCGTCCGCAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGT
CACACAATCGCGCTAAAAAAGAACCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAG
CAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTA
CCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGG
ATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGTAA
GTGCCGTTGGTGCCACCCGCAGAGCTTACATTTGTGCTGTGCGTGTGATTATATTCTCTT
TAGAATCCTGTTTCTTGCTAATCGTGCTCCACACGTGTGGCCAGAGATATTTTTTTGTTG
TAAGTTCGAGAACGCACACACGCTGCAATGCTGTTTCAATAGATTGATGCGTGCGTGTGC
GAAGATGTATAAGTGCGCGCGCGTGTGTGTGTGAATGTCGCTCGAGGCTAGAAACGTAAA
GCAGCCTGCTGCTGCATATGCTGATGGAAA

consensusID : consensus_8459#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence

                              [CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGCTGATCTCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGTACGCACACACT]

[+] EMBL BM584294             [CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGCTGATCTCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGTACGCACACACT]




>consensus_8459#4
CCGGTCCAACACAACAGCCAGCTGTGAAATTCTTTCGTGCGATTTATTCCACATTTCGTC
ACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAA
CTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCA
CATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATG
ACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGCTGATC
TCTGTAAAGGCTGCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATA
CAAATACAAAGCTCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATC
ATTGTATGCGGCAGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGA
GGGCTTACAAGGAGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGTACGCACA
CACT

consensusID : consensus_8459#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 381
fasta sequence

                              [CTGTGAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCGCCTCGCCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGAAAATGGCCATAGCAAATCCTCACGCATGTGCTCAACCCCCCCCCC]

[+] EMBL CNS0995I             [CTGTGAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCCACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCGCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGGAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTGAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCGCCTCGCCGGTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGAAAATGGCCATAGCAAATCCTCACGCATGTGCTCAACCCCCCCCCC]




>consensus_8459#5
CTGTGAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGCC
ACCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCC
GCTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACG
GAAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCT
GAATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCGCCTCGCCGGTAGAAAA
TGGCGCCACAACGAATGGAGAGAAAAAATCTAAGGAAAATGGCCATAGCAAATCCTCACG
CATGTGCTCAACCCCCCCCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8459#0      TCCTCGAGCACTGTTGGCCTACTGGTTGATTCCACACAGTCCAACACAACAGCCAGCTGT 60
consensus_8459#3      -------------------------------CCGCCCA---CGCGTCCGCAGCCAGCTGT 26
consensus_8459#1      -----------------------------------CCGGTCCAACACAACAGCCAGCTGT 25
consensus_8459#5      --------------------------------------------------------CTGT 4
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      -----------------------------------CCGGTCCAACACAACAGCCAGCTGT 25
                                                                                  

consensus_8459#0      GAAATTCTTTCGTGCGATTTATTCCACATTTCGTTACACAATCGCGCTAAAAAAG--CCA 118
consensus_8459#3      GAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCA 86
consensus_8459#1      GAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAGAACCA 85
consensus_8459#5      GAA-TTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAG--CCA 61
consensus_8459#2      --------------------------------CCGACACAATCGCGCTAAAAAAG--CCA 26
consensus_8459#4      GAAATTCTTTCGTGCGATTTATTCCACATTTCGTCACACAATCGCGCTAAAAAAG--CCA 83
                                                         ********************  ***

consensus_8459#0      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCTACTGCAGTAGCTAAAGTGCATCCG 178
consensus_8459#3      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCG 146
consensus_8459#1      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCG 145
consensus_8459#5      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCG 121
consensus_8459#2      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCG 86
consensus_8459#4      CCTTTGCGAAGAAAGTGATCCCCTGCATCGACAGCAACTGCAGTAGCTAAAGTGCATCCG 143
                      *********************************** ************************

consensus_8459#0      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 238
consensus_8459#3      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 206
consensus_8459#1      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 205
consensus_8459#5      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 181
consensus_8459#2      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 146
consensus_8459#4      CTCATCCGAACAGTTGTACGCGGAATGAAAAGTACCACATTTTACGATCACGAAACACGG 203
                      ************************************************************

consensus_8459#0      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 298
consensus_8459#3      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 266
consensus_8459#1      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 265
consensus_8459#5      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 241
consensus_8459#2      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 206
consensus_8459#4      AAAGAGCACCACATCTCGGACAAGATGGCGGCGGATGACGAGCTCAATAATGAGGTGCTG 263
                      ************************************************************

consensus_8459#0      AATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGT-GCCACCCGCAGAGC 357
consensus_8459#3      AATCTGCTAGAGGCGCCCTACAACAAGGAGGTAAGTGCCGTTGGT-GCCACCCGCAGAGC 325
consensus_8459#1      AATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCA-C-CTCACCGGTAGAAA 323
consensus_8459#5      AATCTGCTAGAGGCGCCCTACAACAAGGAGGATGATGCTGCCG-C-CTCGCCGGTAGAAA 299
consensus_8459#2      AATCTGCTAGAGGCGCCCTACAACAAGGAGAC-GATACTAATGTCAGGTTCCGGTATGAG 265
consensus_8459#4      AATCTGCTAGAGGCGCCCTACAACAAGGAG------------------------------ 293
                      ******************************                              

consensus_8459#0      TTACATTTGTGCTGTGCGTGTGATTGTATTCTCTTTAGAATCCTGTTTCCTGCTAATCGT 417
consensus_8459#3      TTACATTTGTGCTGTGCGTGTGATTATATTCTCTTTAGAATCCTGTTTCTTGCTAATCGT 385
consensus_8459#1      ATGGCGCCACAACGAATGGAGAGAAAAAATCTA---AGGAAAATGGTCATAGCAAATCCT 380
consensus_8459#5      ATGGCGCCACAACGAATGGAGAGAAAAAATCTA---AGGAAAATGGCCATAGCAAATCCT 356
consensus_8459#2      TTTGGTACAGAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGCTGATCTCTGTAAAGGCT 325
consensus_8459#4      -----------------------------------------GCTGATCTCTGTAAAGGCT 312
                                                                 **      *  **   *

consensus_8459#0      GCTCCACACGTG-TGGCCAGAGATTTTTTTTTGTTGTAAGTTCGAGAACGCACACACGCC 476
consensus_8459#3      GCTCCACACGTG-TGGCCAGAGATATTTTTTTGTTGTAAGTTCGAGAACGCACACACGCT 444
consensus_8459#1      ----CACGCCAC-CGC--AG-------TCGTTCGCGCGAACGCGAAAGAGAACGTGAGCG 426
consensus_8459#5      ----CACGCATG-TGCTCAA-------CCCCCCCCCC----------------------- 381
consensus_8459#2      GCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGC 385
consensus_8459#4      GCTCTGTGTCTGCTGGTTGGAATCAAAGTAGGCAAAAATACACAAATACAAATACAAAGC 372
                                    *                                             

consensus_8459#0      GCAAAGCTGTT-TCAATAGATT--GATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCG 533
consensus_8459#3      GCAATGCTGTT-TCAATAGATT--GATGCGTGCGTGTGCGAAGATGTATAAGTGCGCGCG 501
consensus_8459#1      GGACCGTGATCGTGAGCGCGAC--CGTGACCGGGAGCGTGAGCGTGACCGTGAACGCGAT 484
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      TCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGC 445
consensus_8459#4      TCTAAGCAATTAAAGATCAGTCACGATATTGACACACACCAAGATATCATTGTATGCGGC 432
                                                                                  

consensus_8459#0      CGTGTGTGTGTGAATGTTGCTCGAGGCTTGAAACGTAAAGCAGCCTGCTGCTGCATATGC 593
consensus_8459#3      CGTGTGTGTGTGAATGTCGCTCGAGGCTAGAAACGTAAAGCAGCCTGCTGCTGCATATGC 561
consensus_8459#1      CGGGACGGTGATAAGGCCTCCAAAAAGCATCGCTCCGGTTCGCCCGGCCG-TACCCGCGA 543
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      AGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGG 505
consensus_8459#4      AGCAAATGCCCTTGTTCCTTACGATAGAGGAAGTGTCCTCCCTAAAGAGGGCTTACAAGG 492
                                                                                  

consensus_8459#0      TGATGGAAAGGAAAGAGACAACCGATCACGGAGGCTCGTCAGCCGTGTTCCGGAAGTTAA 653
consensus_8459#3      TGATGGAAA--------------------------------------------------- 570
consensus_8459#1      CAAGGAGCGCCGTCGCAGCAAGGATCGCAGCAAGTCCCGTTCGCCAGCGCGCCGCGACCG 603
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      AGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAGATGATGCTGCCGCCTCGCCG 565
consensus_8459#4      AGAGGCAAGCAGAAGAAGCAAAAGCTTATCAAAAAAAAAG--TACGCACACACT------ 544
                                                                                  

consensus_8459#0      CGCTAGCAATGTTTACTCTCGCCTCTGTCCCATCCAAGGGCACCGCTTTCCTTTTCATCT 713
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      TTCGAAGGACCGCTCGAAGGAAAAGGACCGCGGCAAGAGCGATCACCATCGGCGGGAGGT 663
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      GTAGAAAATGGCGCCACAACGAATGGAGAGAAAAAAT----------------------- 602
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      CATGGTTCAATATACGCAGTCAAAGTAGAGTTCCTCGAGTTGGTCTTGTAAAATAGCATA 773
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      AGTGGTTGAGAAGCGTCGATCTCGTGATCGCGTTGATCATCGGCGCCGCTCTCGCGAACG 723
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      ATATGTAAGACTCTTTGTATTGCTACGAAAAAGGTGGCCAAAACTCGCGCTGTTGTGTAC 833
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      AGAC-TATCGCCGTCGCAGCCGCTCGAGGGACGGTGGACGGGGCATGGGCCGTGGCCGTC 782
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      ATAATAATCTTCCGTAGTATGTAAGTGCTGTACTGAGAGAAAAAAAACAGAAACCAGAGC 893
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      GCT-CGATGTCCCCCAAACCCTACCGGGGAAGGGGACGAGGTGGCTCCGGCTACTACCGC 841
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      AATAATCGTATAACTATGTATGTTTATTAACAACCATTACCAACCAATTCACATTATCTG 953
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      GATCGAT-CGCCGCTGGAAGAGATGAGCCAGGAGGATCGGGATGCGCGTACCGTCTTCTG 900
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      CAAAAAAAAAATCAAAAACAAAAAACAATCTATTCGATAAAAGGTAAATGACATGAATTT 1013
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      CATGCAGCTGTCC----------------------------------------------- 913
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      TCCTCGTTTCTGCATTTTATAGACGATACTAATGTCAGGTTCCGGTATGAGTTTGGTACA 1073
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      ------------------------------------------------------------
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      GAGAGTGTGTGTATTCAGCTTCCAAGACAAAGGTACATACCCAATTAATACACGAAAACT 1133
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      ------------------------------------------------------------
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      GCAAAATATCCTATTACTGCAACGAAACTACTCTTTCCCTCCCACCCACAACATCACATG 1193
consensus_8459#3      ------------------------------------------------------------
consensus_8459#1      ------------------------------------------------------------
consensus_8459#5      ------------------------------------------------------------
consensus_8459#2      ------------------------------------------------------------
consensus_8459#4      ------------------------------------------------------------
                                                                                  

consensus_8459#0      AGATTAACGGA 1204
consensus_8459#3      -----------
consensus_8459#1      -----------
consensus_8459#5      -----------
consensus_8459#2      -----------
consensus_8459#4      -----------