cluster # 855

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Anopheles gambiae
cluster # 855 cluster # 855 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_855#0 length = 706 sequences # 1

consensus_855#1 length = 633 sequences # 1

consensusID : consensus_855#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence

                              [TTTTTTTTTGTTCTTCACATTCAGGTGCTAGTAGTGAAATCAAAGAAACAATCAATTACCAATATAATTGTTGCCTGTTCCATCCAGATCAATGATGTTTATATCATCAGCTTATGCCATGAACTTGGTTGATTTATAGAATATGATTCCCAAAGTATGCTCCTTCGAGCCTCGGATGGCTTTCTCTAGCGCCAAGTTGAAAAGGATTCTACTCTACGGTCTAAACACTAACCACTTCCCCTACATTCTTCCTTCCATCTGCAGATACAAATCGATGACCTGCTCCCGAAGTGCATCTGTGGATCGTGCTATCTGAAGCTCGAAAGCATCGACCWGTTCGCGCTGATGGCCAGCCGCACCGAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAGCAGCCCGGCCGAGGCGGCAAAAAACGTCAACGTAATGTTGCCCCTGTTTCGACTCGATCCCGACGGTGGTGCCGATTCGAAAAAGGGACACAACGCATCGGCCGCCAAAGACGCACGAAGCAATCCTTCCCCGACCGTATCGACCGCTACACCACCGGCCAGCGTCAGCCCGCCCGAGAAGGGCATCATCTCGTACAGCGATCTGAAGCTGGGGCTGCTGATTAAAGACCAAGAGCTGCTGAAGCTGATCCTGAAGGCGCTCCGGTGGGCGGAGAACGATCGCCGTGCKTCGTTCGAGGTGC]

[+] EMBL AGA281436            [TTTTTTTTTGTTCTTCACATTCAGGTGCTAGTAGTGAAATCAAAGAAACAATCAATTACCAATATAATTGTTGCCTGTTCCATCCAGATCAATGATGTTTATATCATCAGCTTATGCCATGAACTTGGTTGATTTATAGAATATGATTCCCAAAGTATGCTCCTTCGAGCCTCGGATGGCTTTCTCTAGCGCCAAGTTGAAAAGGATTCTACTCTACGGTCTAAACACTAACCACTTCCCCTACATTCTTCCTTCCATCTGCAGATACAAATCGATGACCTGCTCCCGAAGTGCATCTGTGGATCGTGCTATCTGAAGCTCGAAAGCATCGACCWGTTCGCGCTGATGGCCAGCCGCACCGAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAGCAGCCCGGCCGAGGCGGCAAAAAACGTCAACGTAATGTTGCCCCTGTTTCGACTCGATCCCGACGGTGGTGCCGATTCGAAAAAGGGACACAACGCATCGGCCGCCAAAGACGCACGAAGCAATCCTTCCCCGACCGTATCGACCGCTACACCACCGGCCAGCGTCAGCCCGCCCGAGAAGGGCATCATCTCGTACAGCGATCTGAAGCTGGGGCTGCTGATTAAAGACCAAGAGCTGCTGAAGCTGATCCTGAAGGCGCTCCGGTGGGCGGAGAACGATCGCCGTGCKTCGTTCGAGGTGC]




>consensus_855#0
TTTTTTTTTGTTCTTCACATTCAGGTGCTAGTAGTGAAATCAAAGAAACAATCAATTACC
AATATAATTGTTGCCTGTTCCATCCAGATCAATGATGTTTATATCATCAGCTTATGCCAT
GAACTTGGTTGATTTATAGAATATGATTCCCAAAGTATGCTCCTTCGAGCCTCGGATGGC
TTTCTCTAGCGCCAAGTTGAAAAGGATTCTACTCTACGGTCTAAACACTAACCACTTCCC
CTACATTCTTCCTTCCATCTGCAGATACAAATCGATGACCTGCTCCCGAAGTGCATCTGT
GGATCGTGCTATCTGAAGCTCGAAAGCATCGACCWGTTCGCGCTGATGGCCAGCCGCACC
GAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAGCAGCCCGGCCGAGGCG
GCAAAAAACGTCAACGTAATGTTGCCCCTGTTTCGACTCGATCCCGACGGTGGTGCCGAT
TCGAAAAAGGGACACAACGCATCGGCCGCCAAAGACGCACGAAGCAATCCTTCCCCGACC
GTATCGACCGCTACACCACCGGCCAGCGTCAGCCCGCCCGAGAAGGGCATCATCTCGTAC
AGCGATCTGAAGCTGGGGCTGCTGATTAAAGACCAAGAGCTGCTGAAGCTGATCCTGAAG
GCGCTCCGGTGGGCGGAGAACGATCGCCGTGCKTCGTTCGAGGTGC

consensusID : consensus_855#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 633
fasta sequence

                              [CCGACTGAAAGGGAAAACCCTGGCCTCAACCACACACACACACACACACTCTGGGGAGCATTTCACAATCATAGCAGGCTTAAGCTGCCAAAGGGGGAGAGCAGGTCCGGAAAGGGTTTGCTCAACAGTGAAAAGTGTCAAAAAAAAGTGTGTGTGTGCGTGTAAAAGTGGTCAAACGAAAAGGGCCTTGCAACCCGGAGAAAAGCTGTAACGCAGCACGTGTGTAGAGAGGAGTGGTTGGTGTGTGATTTTTTTGCACCAGATTGTGACTTGCTTTACAACTGTTTGCGCATTTTACAATACCAACAACAAAAGAAGTACGAATGGATTCGAACAGCCTGCTGAGCATGAACCTGGCACTGAACGTGGCGCGGAAGTGTCGCATCTGCGGCATGGACATACTCGATCTCACGTGCGCCTTCCCGATCTTTGGCAACGATCGGGTGGATCAGAAACTGGAGCGCTACCTGCAGCTGAATATACAAATCGATGACCTGCTCCCGAAGTGCATCTGTGGATCGTGCTATCTGAAGCTCGAAAGCATCGACCAGTTCGCGCTGATGGCCAGCCGCACCGAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAACAGCCCGGCCGAGG]

[+] EMBL BM601525             [CCGACTGAAAGGGAAAACCCTGGCCTCAACCACACACACACACACACACTCTGGGGAGCATTTCACAATCATAGCAGGCTTAAGCTGCCAAAGGGGGAGAGCAGGTCCGGAAAGGGTTTGCTCAACAGTGAAAAGTGTCAAAAAAAAGTGTGTGTGTGCGTGTAAAAGTGGTCAAACGAAAAGGGCCTTGCAACCCGGAGAAAAGCTGTAACGCAGCACGTGTGTAGAGAGGAGTGGTTGGTGTGTGATTTTTTTGCACCAGATTGTGACTTGCTTTACAACTGTTTGCGCATTTTACAATACCAACAACAAAAGAAGTACGAATGGATTCGAACAGCCTGCTGAGCATGAACCTGGCACTGAACGTGGCGCGGAAGTGTCGCATCTGCGGCATGGACATACTCGATCTCACGTGCGCCTTCCCGATCTTTGGCAACGATCGGGTGGATCAGAAACTGGAGCGCTACCTGCAGCTGAATATACAAATCGATGACCTGCTCCCGAAGTGCATCTGTGGATCGTGCTATCTGAAGCTCGAAAGCATCGACCAGTTCGCGCTGATGGCCAGCCGCACCGAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAACAGCCCGGCCGAGG]




>consensus_855#1
CCGACTGAAAGGGAAAACCCTGGCCTCAACCACACACACACACACACACTCTGGGGAGCA
TTTCACAATCATAGCAGGCTTAAGCTGCCAAAGGGGGAGAGCAGGTCCGGAAAGGGTTTG
CTCAACAGTGAAAAGTGTCAAAAAAAAGTGTGTGTGTGCGTGTAAAAGTGGTCAAACGAA
AAGGGCCTTGCAACCCGGAGAAAAGCTGTAACGCAGCACGTGTGTAGAGAGGAGTGGTTG
GTGTGTGATTTTTTTGCACCAGATTGTGACTTGCTTTACAACTGTTTGCGCATTTTACAA
TACCAACAACAAAAGAAGTACGAATGGATTCGAACAGCCTGCTGAGCATGAACCTGGCAC
TGAACGTGGCGCGGAAGTGTCGCATCTGCGGCATGGACATACTCGATCTCACGTGCGCCT
TCCCGATCTTTGGCAACGATCGGGTGGATCAGAAACTGGAGCGCTACCTGCAGCTGAATA
TACAAATCGATGACCTGCTCCCGAAGTGCATCTGTGGATCGTGCTATCTGAAGCTCGAAA
GCATCGACCAGTTCGCGCTGATGGCCAGCCGCACCGAGGAAGCGTTCCGCGCCTGGCTCG
GTCGTCTCCGCGGTCTCAACAGCCCGGCCGAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_855#0      TTTTTTTTTGTTCTTCACATTCAGGTGCTAGTAGTGAAATCAAAGAAACAATCAATTACC 60
consensus_855#1      --------CCGACTGAAAGGGAAAACCCTGGCCTC--AACCACACACACACACACACACT 50
                                 **  *     *    ** *      ** ** * * ***  **   ** 

consensus_855#0      AATATAATTGTTGCCTGTTCCATCCAGATCAATGATGTTTATATCATCAGCTTATGCCAT 120
consensus_855#1      CTGGGGAGCATTTCACAATCATAGCAGGCTTAAGCTGCCAA-AGGGGGAGAGCAGGTCCG 109
                           *   ** *    **    ***    * * **   * *     **   * * *  

consensus_855#0      GAACTTGGTTGATTTATAGAATATGATTCCCAAAGTATGCTCCTTCGAGCCTCGGATGGC 180
consensus_855#1      GAAAGGGTTTGCTCAACAGTGAAAAGTGTCAAAAAAAAGTGTGTGTGTGCGTGTAAAAG- 168
                     ***   * *** *  * **   *   *  * ***  * *    *  * ** *   *  * 

consensus_855#0      TTTCTCTAGCGCCAAGTTGAAAAGGATTCTACTCTACGGTCTAA-ACACTAACCACTTCC 239
consensus_855#1      -TGGTCAAACGAAAAGGGCCTTGCAACCCGGAGAAAAGCTGTAACGCAGCACGTGTGTAG 227
                      *  ** * **  ***         *  *      * * * ***  **  *      *  

consensus_855#0      CCTACATTCTTCCTTCC---ATCTGCAGATACAAATCGATGACCTGCTCCCGAAGTGCAT 296
consensus_855#1      AGAGGAGTGGTTGGTGTGTGATTTTTTTGCACCAGATTGTGACTTGCTTTACAACTG--T 285
                          * *  *   *     ** *      ** *     **** ****    ** **  *

consensus_855#0      CTGTGGATCGTGCTATCTGAAGCTCGAAAGCATCGACCWGTTCGCGCTGATGGCCAGCCG 356
consensus_855#1      TTGCGCATTTTACAATACCAACAACAAAAGAAGT-ACGAATGGATTCGAACAGCCTGCTG 344
                      ** * **  * * **   **   * **** *   **   *     *  *  *** ** *

consensus_855#0      CACCGAGGAAGCGTTCCGCGCCTGGCTCGGTCGTCTCCGCGGTCTCAGCAGCCCGGCCGA 416
consensus_855#1      AGCATGAACCTGGCACTGAACGTGGCGCGGAAGTGTC----GCATCTGCGGCATGGAC-- 398
                       *         *  * *  * **** ***  ** **    *  ** ** **  ** *  

consensus_855#0      GGCGGCAAAAAACGTCAACGTAATGTTGCCCCTGTTTCGACTCGATCCCGACGGTGGTGC 476
consensus_855#1      ---------ATAC-TCGATCTCACGT-GCGCCT-TCCCGA-TCTTTGGCAACGATCGGGT 445
                              * ** ** *  * * ** ** *** *  *** **  *  * *** * * * 

consensus_855#0      CGATTCGAAAAAGGGACACAACGCATCGGCCGCCAAAGACGCACGAAGCAATCCTTCCCC 536
consensus_855#1      GGATCAGAAACTGGAGCGCTAC----CTGCAGCTGAATATACAAATCGATGACCTGCTCC 501
                      ***  ****  **  * * **    * ** **  ** *  **    *    *** * **

consensus_855#0      GACCGTATCGACCGCTACACCACCGGCCAGCGTCAGCCCGCCCGAGAAGGGCATCATCTC 596
consensus_855#1      CGAAGTGC--ATCTGTGGATCGT--GCTATCTGAAGCTCG-------AAAGCATCGACCA 550
                         **    * *  *  * *    ** * *   *** **       *  *****  *  

consensus_855#0      GTACAGCGATCTGAAGCTGGGGCTGCTGATTAAAGACCAAGAGCTGCTGAAGCTGATCCT 656
consensus_855#1      GTTC-GCG--CTGATG----GCCAGCCG--CACCGAGGAAGCGTT-CCGCGCCTGGCTCG 600
                     ** * ***  **** *    * * ** *   *  **  *** * * * *   ***   * 

consensus_855#0      GAAGGCGCTCCGGTGGGCGGAGAACGATCGCCGTGCKTCGTTCGAGGTGC 706
consensus_855#1      GTCGTCTCCGCGGTCTCAACAGCCCGGCCGAGG----------------- 633
                     *  * * *  ****      **  **  **  *