cluster # 8550

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Anopheles gambiae
cluster # 8550 cluster # 8550 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8550#0 length = 992 sequences # 4
consensus_8550#1 length = 666 sequences # 3

consensus_8550#2 length = 662 sequences # 1
consensus_8550#3 length = 661 sequences # 2
consensus_8550#4 length = 604 sequences # 1

consensusID : consensus_8550#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 992
fasta sequence

                              [CCGCCCCAGCTTTCCAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACAC--------GTGTGTGTGTGCACATTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGG-AGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCTACAGCTACCAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCTTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCGACTTCTCCGGTG]

[+] EMBL BM646136             [CCGCCCACGCGTCCGAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACAC        GTGTGTGTGTGCACATTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGG AGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTG                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM640129             [   CCGCAGCTTTCCAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGTGTGTGTGCACATTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAAGAAGGAGGACGATGTCGCTCCACCGACGAAGAAGG                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM628238             [     CCGGATTTCCAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACAC        GTGTGTGTGTGCACATTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTG                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM601392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGATGATGAGG AGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCTACAGCTACCAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCTTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCGACTTCTCCGGTG]




>consensus_8550#0
CCGCCCCAGCTTTCCAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCA
ACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAA
AGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGA
CGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAG
TGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGCACA
TTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCT
ATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTG
CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC
GGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA
AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT
CATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGAC
GAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGA
AGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCTACAG
CTACCAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCTTATCA
AGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTAC
CACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGA
TGAGTCGGACGAACAGATCGACTTCTCCGGTG

consensusID : consensus_8550#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 666
fasta sequence

                              [CCGGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGC-TTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACAC--GTGTGTGTGTGTGTGTGTGCACATTTGGTGTGGAAAAGTTGCGCCCCGTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTCGACGATGACGATGAGGACGATGATGAGGAAGAAGGAGGACGATGTCGCTCCCCCGACGAAGAAGGC]

[+] EMBL BM655682             [CCGGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGC TTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACAC  GTGTGTGTGTGTGTGTGTGCACATTTGGTGTGGAAAAGTTGCGCCCCG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM586061             [CCGGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTTCAGTGGTTGTGCAGGTAGTTAGTGTGAC AAACAGCACAC  GTG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM632871             [       ccGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGC TTGAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGTGTGTGTGTGCACA TTGGTGTGG AAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTCGACGATGACGATGAGGACGATGATGAGGAAGAAGGAGGACGATGTCGCTCCCCCGACGAAGAAGGC]




>consensus_8550#1
CCGGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTTCGCA
CCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAATAGAG
GCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCAATTT
CCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTGTTTG
TGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGTGTGTGTGCACATTTGGT
GTGGAAAAGTTGCGCCCCGTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCTATCG
AAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTGCCAG
TACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAA
CTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGT
GTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTC
GACGATGACGATGAGGACGATGATGAGGAAGAAGGAGGACGATGTCGCTCCCCCGACGAA
GAAGGC

consensusID : consensus_8550#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCGACTTC]

[+] EMBL BM578656             [CCGCCCACGCGTCCGCCCACGCGTCCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCGACTTC]




>consensus_8550#2
CCGCCCACGCGTCCGCCCACGCGTCCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGA
CTCTAACGAGAATTGGAAGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCC
AGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGG
ACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAG
GTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCA
TCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGA
AGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAG
TGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCT
ACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAG
TGGAGGATCTAAGCGGTGAGAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAAC
CGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCGACT
TC

consensusID : consensus_8550#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 661
fasta sequence

                              [CCGGAACGTAGCAGAAAAGACGTTCGGAACGAGACAAGCCAAACTCTAACGAGAATTGGAAGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGCGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGATAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCG]

[+] EMBL BM576247             [CCGGAACGTAGCAGAAAAGACGTTCGGAACGAGACAAGCCAAACTCTAACGAGAATTGGAAGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGCGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGATAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTAC                            ]
[+] EMBL BM581470             [        ccGCACAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTGTACCTTTTTGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAATAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGCGGTAAGCAAGTGAAGCCGGAAGTGTCCACCGTTGGGTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGCGAGGTACTTACAATCGAGCAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATCG]




>consensus_8550#3
CCGGAACGTAGCAGAAAAGACGTTCGGAACGAGACAAGCCAAACTCTAACGAGAATTGGA
AGGTGTACCTTTTAGATGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTC
ACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGAACTGCCCAAGGCGAAG
GATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGAT
CCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCGTCGACGATGACGATGAG
GACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTG
AACCCGATGTATGCGCTGCGTGGCAAGCAGGCGAAGCCGGAAGTGTCCACCGTTGGTTCG
GTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGATAGCTACGAGGAGGTACTGCTG
AAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGT
GAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTACCACCGCAAAGCCCGTCGCT
AAACCGGCAACCGAAGACAATTACGATGAGTACGATGATGATGAGTCGGACGAACAGATC
G

consensusID : consensus_8550#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 604
fasta sequence

                              [CCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATG]

[+] EMBL BM613191             [CCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTCTCAGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGACGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATG]




>consensus_8550#4
CCGGCAGAAAAGACGTTCGGAACGAGACAAGCCAGACTCTAACGAGAATTGGAAGGTCTC
AGTTCACACCATGAGGTGCCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTAC
CGTGAACTCTCTCAAGCCGGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCT
TGCCGAAAGCAGCACCAAAGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCC
CGACCTGGAGGAAAATCTCATCGACGATGACGATGAGGACGATGATGAGGAGGAGGAGGA
CGATGTCGCTCCACCGACGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGG
CAAGCAGGTGAAGCCGGAAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGAT
CAACGAAGATATCGACAGCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGA
CATTGATGATTCGTATCAAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGA
AAAACCTTCCAATCTACCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTAC
GATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8550#2      ------------------------------------------------------------
consensus_8550#3      ------------------------------------------------------------
consensus_8550#4      ------------------------------------------------------------
consensus_8550#0      CCGCCCCAGCTTTCCAAGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCA 60
consensus_8550#1      ----CCGGTGACTGCACGCACGTGATTAGCGTGCGCCCGTTCCGAACTCAACAAGTTCTT 56
                                                                                  

consensus_8550#2      ------------------------------------------------------------
consensus_8550#3      ------------------------------------------------------------
consensus_8550#4      ------------------------------------------------------------
consensus_8550#0      ACAAGTTCTTCGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAA 120
consensus_8550#1      CGCACCGATTGGAAAACATTCCGATTCGGTTCGAGTTTAAAGCGTACAAAAGTGTCGAAT 116
                                                                                  

consensus_8550#2      ------------------------------------------------------------
consensus_8550#3      ------------------------------------------------------------
consensus_8550#4      ------------------------------------------------------------
consensus_8550#0      AGTGTCGAATAGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGA 180
consensus_8550#1      AGAGGCGAAACAAAAATCCATCGATAAAGATAAGCAACGAGTGTGATCGACGACTTGGCA 176
                                                                                  

consensus_8550#2      ------------------------------------------------------------
consensus_8550#3      ------------------------------------------------------------
consensus_8550#4      ------------------------------------------------------------
consensus_8550#0      CGACTTGGCAATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAG 240
consensus_8550#1      ATTTCCGGAGTAACACCTTTAATCACAGCGTGACTGTGTGTGTGCGCAAGTGCTTCAGTG 236
                                                                                  

consensus_8550#2      -------------------------------------------------------CCGCC 5
consensus_8550#3      ------------------------------------------------------------
consensus_8550#4      ------------------------------------------------------------
consensus_8550#0      TGCTTCAGTGTTTGTGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGCACA 300
consensus_8550#1      TTTGTGCAGGTAGTTAGTGTGACAAAACAGCACACGTGTGTGTGTGTGTGTGTGCACATT 296
                                                                                  

consensus_8550#2      CACGCGTCCGCCCACGCGTCCGGCAG-AAAAGACGTTCGGAACGAGACAAGCCAGACTCT 64
consensus_8550#3      ----------CCGGAACGT--AGCAG-AAAAGACGTTCGGAACGAGACAAGCCAAACTCT 47
consensus_8550#4      -------------------CCGGCAG-AAAAGACGTTCGGAACGAGACAAGCCAGACTCT 40
consensus_8550#0      TTGGTGTGGAAAGTTGCGCCCGTTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCT 360
consensus_8550#1      TGGTGTGGAAAAGTTGCGCCCCGTCGTAAAATCCACCCTCGCCCCGCGGAAACATCCCCT 356
                                               * ****  *   *    *  *   *  **  * **

consensus_8550#2      AACGAGAATTGGAAGGTGTA------CCTTTTAGATGGTCTCAGTTCACACCATGAGGTG 118
consensus_8550#3      AACGAGAATTGGAAGGTGTA------CCTTTTAGATGGTCTCAGTTCACACCATGAGGTG 101
consensus_8550#4      AACGAGAATTGGAAGGT----------------------CTCAGTTCACACCATGAGGTG 78
consensus_8550#0      ATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTG 420
consensus_8550#1      ATCGAAGGCAGGGAGAAGTCGAGAGCTCCCCAGAAAGGTCTCAGTTCACACCATGAGGTG 416
                      * ***     ** **                        *********************

consensus_8550#2      CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC 178
consensus_8550#3      CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC 161
consensus_8550#4      CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC 138
consensus_8550#0      CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC 480
consensus_8550#1      CCAGTACCTACTGGTGCTCACGGTAGTGCTATGTGCGCTTACCGTGAACTCTCTCAAGCC 476
                      ************************************************************

consensus_8550#2      GGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA 238
consensus_8550#3      GGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA 221
consensus_8550#4      GGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA 198
consensus_8550#0      GGACCTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA 540
consensus_8550#1      GGAACTGCCCAAGGCGAAGGATCCACTGTTTAACAAAATGCTTGCCGAAAGCAGCACCAA 536
                      *** ********************************************************

consensus_8550#2      AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT 298
consensus_8550#3      AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT 281
consensus_8550#4      AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT 258
consensus_8550#0      AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT 600
consensus_8550#1      AGGTGTGGATGCGCAGGATCCTCGGTACAACAAAATGCTGCCCGACCTGGAGGAAAATCT 596
                      ************************************************************

consensus_8550#2      CATCGACGATGACGATGAGGACGATGATGAGGAGGA-GGAGGACGATGTCGCTCCACCGA 357
consensus_8550#3      CGTCGACGATGACGATGAGGACGATGATGAGGAGGA-GGAGGACGATGTCGCTCCACCGA 340
consensus_8550#4      CATCGACGATGACGATGAGGACGATGATGAGGAGGA-GGAGGACGATGTCGCTCCACCGA 317
consensus_8550#0      CATCGACGATGACGATGAGGACGATGATGAGGAGGA-GGAGGACGATGTCGCTCCACCGA 659
consensus_8550#1      CGTCGACGATGACGATGAGGACGATGATGAGGAAGAAGGAGGACGATGTCGCTCCCCCGA 656
                      * ******************************* ** ****************** ****

consensus_8550#2      CGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGG 417
consensus_8550#3      CGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGCGAAGCCGG 400
consensus_8550#4      CGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGG 377
consensus_8550#0      CGAAGAAGGCTGCCGACCTGAACCCGATGTATGCGCTGCGTGGCAAGCAGGTGAAGCCGG 719
consensus_8550#1      CGAAGAAGGC-------------------------------------------------- 666
                      **********                                                  

consensus_8550#2      AAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACA 477
consensus_8550#3      AAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGATA 460
consensus_8550#4      AAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCGACA 437
consensus_8550#0      AAGTGTCCACCGTTGGTTCGGTTGCTATCAACAAGGTAAAGATCAACGAAGATATCTACA 779
consensus_8550#1      ------------------------------------------------------------
                                                                                  

consensus_8550#2      GCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATC 537
consensus_8550#3      GCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATC 520
consensus_8550#4      GCTACGAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCGTATC 497
consensus_8550#0      GCTACCAGGAGGTACTGCTGAAGGGTAACGGCAAGAGTGTGGACATTGATGATTCTTATC 839
consensus_8550#1      ------------------------------------------------------------
                                                                                  

consensus_8550#2      AAGTGGAGGATCTAAGCGGTGAG---------------------AAACCTTCCAAATCTA 576
consensus_8550#3      AAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTA 580
consensus_8550#4      AAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAA-TCTA 556
consensus_8550#0      AAGTGGAGGATCTAAGCGGTGAGGTACTTACAATCGAGGAGGAAAAACCTTCCAAATCTA 899
consensus_8550#1      ------------------------------------------------------------
                                                                                  

consensus_8550#2      CCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATG 636
consensus_8550#3      CCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATG 640
consensus_8550#4      CCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATG------------ 604
consensus_8550#0      CCACCGCAAAGCCCGTCGCTAAACCGGCAACCGAAGACAATTACGATGAGTACGATGATG 959
consensus_8550#1      ------------------------------------------------------------
                                                                                  

consensus_8550#2      ATGAGTCGGACGAACAGATCGACTTC------- 662
consensus_8550#3      ATGAGTCGGACGAACAGATCG------------ 661
consensus_8550#4      ---------------------------------
consensus_8550#0      ATGAGTCGGACGAACAGATCGACTTCTCCGGTG 992
consensus_8550#1      ---------------------------------