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Anopheles gambiae
cluster # 8661 cluster # 8661       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8661#0 length = 1546 sequences # 9  
 consensus_8661#1 length = 930 sequences # 1  
consensus_8661#2 length = 127 sequences # 1  
consensusID : consensus_8661#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1546
fasta sequence 
                              [ACGCGGTGGCTCGCACACGCAATGGCGCTCGTTGCGCGAAAGAAAGAATGTGGAATTTGCGGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAAGTTTTCCAGCACAACGGTGGTGCAGCTGCTGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATCGAACTGGAGCAATCGGGTGTGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCGGCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA-TCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA-TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTCTACATGCA-TCAG-TGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATTCGTTCACATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTC-CGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTAGCGCATCTTCATTGCGCTGCCAGAAGCGCTCATCACTGTGAAAAAA]

[+] EMBL CNS095O5             [ACGCGGTGGCTCGCACACGCAATGGCGCTCGTTGCGCGAAAGAAAGAATGTGGAATTTGCGGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAAGTTTTCCAGCACAACGGTGATGCAGCTGCCGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATCGAATTGGAGCAATCGGGTGCGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCGGCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAATCTTGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCGGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA TCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGTAACGGGAGATGAAACACATCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGGCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS095ZC             [               CACGCAATGGCGCTCGTTGCGCGAAAGAAAGAATGTGGAATTTGCGGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAA TTTTCCAGCACAACGGTGGTGCAGCTGCTGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATCGAACTGGAGCAATCGGGTGTGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCGGCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAAAATTGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA TCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAA CGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGGGCGAAAAGGCTTACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08ZWT             [                           acCGTTGCG GAAAGAAAGAATGTGGAATTTGCGGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAAGTTTTCCAGCACAACGGTGGTGCAGCTGCTGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATCGAACTGGAGCAATCGGGTGTGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCGGCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA TCGGAACGGAAAACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCGCCTGGGCAAGCATGTGCGCGAATCGCAGCTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS0991Y             [                                                                                                                                                                                                                                              CGG CTA ACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATAAAAACGATTATTAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGATTGTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09HJD             [                                                                                                                                                                                                                                                                          GCAAGAGCTGACGGATCTGCTGCAAAACAGCAACTTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGATGAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCGAACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAGTGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA TCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGGGATACACACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTCTACATGCA TCAGCTGGCGCACAAGGATGTGCGGGCGAAAAAATGTACCATCTGGGGTAATTCGTTCACATCGAATT                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS095O6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGA TCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGTAACGGGAGATGAAACACATCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGGCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTCTACATGCA TCAGCTGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATTCGTTCACATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTC CGGAGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAATGCACACAGCGGCAAGACGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGGTATACTCAGCTGAAAAAACATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGTTGGAACGTAACCACCTGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTAGCGCATCTTCATTGCGCTGCCAGAAGCGCTCATCACTGTGAAAAAA]
[-] EMBL CNS0991Z             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGCGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTCTACATGCACTCAG TGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATTCGTTAATATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTC CGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTAGCGCATCTTCATTGCGCTGCCA                        ]
[-] EMBL CNS09HJE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGACTCGA TGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCCCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTCTACATGCA TCAGCTGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATTCGTTCACATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTC CGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGT                                               ]
[-] EMBL CNS08ZWU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAAAACTTCAAAAAAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAAATCGCGCTGCCCTAGCCAGTCGCCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACAAACGGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTAAATTCACTACTCATCCTTCTACATGCA TCAG TGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATTCGTTCACATCGAATTCCCATTTAAAGCGAAATATGCGGACCCATTCTCGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCCCCA                                                                                                  ]




>consensus_8661#0
ACGCGGTGGCTCGCACACGCAATGGCGCTCGTTGCGCGAAAGAAAGAATGTGGAATTTGC
GGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAAGTTTTCCAGC
ACAACGGTGGTGCAGCTGCTGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATC
GAACTGGAGCAATCGGGTGTGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCG
GCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAAC
TTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGAT
GAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCG
AACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAG
TGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGAC
GAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTA
GTTATTGAAACGATCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGAC
GAGCCTGGCGACTCGATGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAA
ATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCA
TGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACA
AGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACT
CGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGC
GTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACG
GGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTTC
TACATGCATCAGTGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAATT
CGTTCACATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTCCGGGGAAAAACCGT
TCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGA
ACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATC
AATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGG
CAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGT
AACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTA
GCGCATCTTCATTGCGCTGCCAGAAGCGCTCATCACTGTGAAAAAA

consensusID : consensus_8661#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 930
fasta sequence 
                              [AACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGATCGGAACGGAGGACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGATGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGCGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACAATCACTACTCATCCTTCTACATGCGGACCCATTCCGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTAGCGCATCTTCATTGCGCTGCCA]

[-] EMBL CNS095ZD             [AACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGATCGGAACGGAGGACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGATGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACGCGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACAATCACTACTCATCCTTCTACATGCGGACCCATTCCGGGGAAAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGTAGCGCATCTTCATTGCGCTGCCA]




>consensus_8661#1
AACAACCTACAGGATGCGGATCTGCACACCCATGACGAGGTTTCCGAAGAGGAGCAGCCG
CCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTAGTTATTGAAACGATCGGAACGGAG
GACATACACGCCGACGCAGCTCCGGAAGAGAGTGACGAGCCTGGCGACTCGATGTACACT
GAGGATGGTTGTGTGCAACCGTATTACAAAACGGAAATGAAGGATGAGGAGGAAGCGGGA
GATGAAACTCGTCCCGAACAGAACCGCCGAATGGCATGTTTCTACTGTGAAGCCACGTTT
GAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACAAGCCACCCGATCGATCTGGAAAAG
AACATATGCAAAGTGTGTGGCCTTACGATGAAAACTCGCGCTGCCCTAGCCAGTCACCTG
GGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGCGTGTGCAGCAAAAAGTTCACCCAG
AGAACTTCCCTCCAGCGGCACATGGCGATACACACGCGGCGAAAAGGCTTACCAGTGCGA
CCAGTGCGGGAAGCAGTACAATCACTACTCATCCTTCTACATGCGGACCCATTCCGGGGA
AAAACCGTTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCA
GCACCTGAACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCA
CTGTGATCAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCC
GGACAAGGCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGC
AGGAACGTAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGC
AGCTAGTAGCGCATCTTCATTGCGCTGCCA

consensusID : consensus_8661#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 127
fasta sequence 
                              [ATAGCAAATTGAGATTATTGGAAGAGCTGGAAGTAAAGTAGGAAGATGATGAGAAGGTAAAGGTGGATGAGCAGAATGGTGAGATAAAATGGGAGCAATTGGGAGAGGTTGAAAAGTTGGGTGATGT]

[+] EMBL CNS08XUZ             [ATAGCAAATTGAGATTATTGGAAGAGCTGGAAGTAAAGTAGGAAGATGATGAGAAGGTAAAGGTGGATGAGCAGAATGGTGAGATAAAATGGGAGCAATTGGGAGAGGTTGAAAAGTTGGGTGATGT]




>consensus_8661#2
ATAGCAAATTGAGATTATTGGAAGAGCTGGAAGTAAAGTAGGAAGATGATGAGAAGGTAA
AGGTGGATGAGCAGAATGGTGAGATAAAATGGGAGCAATTGGGAGAGGTTGAAAAGTTGG
GTGATGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8661#0      ACGCGGTGGCTCGCACACGCAATGGCGCTCGTTGCGCGAAAGAAAGAATGTGGAATTTGC 60
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GGAAACATACGGCCAATGGTTCAGCATAACCTGCAGAAGGTGAAGACGAAGTTTTCCAGC 120
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      ACAACGGTGGTGCAGCTGCTGGAGCGTTTCTTCGAACGTGAGCTGTCCGATCGGGCCATC 180
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GAACTGGAGCAATCGGGTGTGTGCAAAGAGTGCTACACCAAGCTAAACGACTACGATGCG 240
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GCCTACACGAAAGCTCTAATTATCCAGCAAGAGCTGACGGATCTGCTGCAAAACAGCAAC 300
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      TTGCGATTATTCGAAGAGCTGCACGTCCAGTCGGACGACGATGAGAAGGTAAAGGTGGAT 360
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GAGCAGCATGGCGAGATAAAATGGGAGCAATCGGGAGAGGTTGAACAGTCGGGCGATGCG 420
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      AACCCCACGGCCAGGATGCTTTCCGTCGATGCCCTGCCCACCATTCGCATTTGCATGGAG 480
consensus_8661#1      ------------------------------------------------------------
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      TGTGCTGTATGCGGGGAGACATTTAACAACCTACAGGATGCGGATCTGCACACCCATGAC 540
consensus_8661#1      ------------------------AACAACCTACAGGATGCGGATCTGCACACCCATGAC 36
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTA 600
consensus_8661#1      GAGGTTTCCGAAGAGGAGCAGCCGCCGATCAAGGAATCGTCCAACTCTTCGCCTATGCTA 96
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GTTATTGAAACGATCGGAACGGAGCACATACACGCCGACGCAGCTCCGGAAGAGAGTGAC 660
consensus_8661#1      GTTATTGAAACGATCGGAACGGAGGACATACACGCCGACGCAGCTCCGGAAGAGAGTGAC 156
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GAGCCTGGCGACTCGATGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAA 720
consensus_8661#1      GAGCCTGGCGACTCGATGTACACTGAGGATGGTTGTGTGCAACCGTATTACAAAACGGAA 216
consensus_8661#2      ----------------------------ATAGCAAATTGAGATTATTGGAAGAGCTGGAA 32
                                                  ** *     **  *   *   *  *   ****

consensus_8661#0      ATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCA 780
consensus_8661#1      ATGAAGGATGAGGAGGAAGCGGGAGATGAAACTCGTCCCGAACAGAACCGCCGAATGGCA 276
consensus_8661#2      GTAAAGTAGGAAGATGATG-AGAAGGTAAAGGTGGAT--GAGCAGAATGGTGAGATAAAA 89
                       * *** * ** ** ** *  * ** * **  * *    ** *****  *    **   *

consensus_8661#0      TGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACA 840
consensus_8661#1      TGTTTCTACTGTGAAGCCACGTTTGAGGATAAAGTTAGTCTTAAGGAACACTTCAAAACA 336
consensus_8661#2      TGGGAGCAATTGGGAG--AGGTTGAAAAGTTGGGTGATGT-------------------- 127
                      **     * *  * **  * ***  *   *   ** *                       

consensus_8661#0      AGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACT 900
consensus_8661#1      AGCCACCCGATCGATCTGGAAAAGAACATATGCAAAGTGTGTGGCCTTACGATGAAAACT 396
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      CGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGC 960
consensus_8661#1      CGCGCTGCCCTAGCCAGTCACCTGGGCAAGCATGTGCGCGAATCGCAGCTAACCTGTAGC 456
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACG 1020
consensus_8661#1      GTGTGCAGCAAAAAGTTCACCCAGAGAACTTCCCTCCAGCGGCACATGGCGATACACACG 516
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      -GGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACATTCACTACTCATCCTT 1079
consensus_8661#1      CGGCGAAAAGGCTTACCAGTGCGACCAGTGCGGGAAGCAGTACAATCACTACTCATCCTT 576
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      CTACATGCATCAGTGGCGCACAAGGATGTGCGGGCGAAAAAGTGTACCATCTGTGGGAAT 1139
consensus_8661#1      CTACATGC---------------------------------------------------- 584
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      TCGTTCACATCGAATTCCCATTTAAAGCGACACATGCGGACCCATTCCGGGGAAAAACCG 1199
consensus_8661#1      -------------------------------------GGACCCATTCCGGGGAAAAACCG 607
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      TTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTG 1259
consensus_8661#1      TTCGATTGCCCCGTGTGTGGTCAAAAGTTTTCACAAAGGTACAACATGGTCCAGCACCTG 667
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      AACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGAT 1319
consensus_8661#1      AACGCACACAGCGGCAAGGCGAAACGAAGCGTGAAAATGTTAAAATGTCCTCACTGTGAT 727
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      CAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAG 1379
consensus_8661#1      CAATGCAGCGATCGTTATACACAGCTGAAAAAGCATTTGGAAAAGTATCACCCGGACAAG 787
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      GCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACG 1439
consensus_8661#1      GCAGCCAGCACGCTGGAATCGATGCAGAAAGCAAAGATCAAACCTAGTATGGCAGGAACG 847
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      TAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGT 1499
consensus_8661#1      TAACCACCAGCAAGCTAAGTGTTTAGTAGATCGTAACGAAATAAAACTTTGGCAGCTAGT 907
consensus_8661#2      ------------------------------------------------------------
                                                                                  

consensus_8661#0      AGCGCATCTTCATTGCGCTGCCAGAAGCGCTCATCACTGTGAAAAAA 1546
consensus_8661#1      AGCGCATCTTCATTGCGCTGCCA------------------------ 930
consensus_8661#2      -----------------------------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)