cluster # 8675

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Anopheles gambiae
cluster # 8675 cluster # 8675 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8675#0 length = 1415 sequences # 7

consensus_8675#1 length = 1368 sequences # 3
consensus_8675#2 length = 875 sequences # 1

consensusID : consensus_8675#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1415
fasta sequence

                              [AGATCCCCGAGGTTAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAGTTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCATATATTCAGGCATGTGGCCTGGAGCGAACACCTTTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGAAGCTACGTTCCGGAGGGTAGCTTTGTGCCGCTGCGTAACGAA-GAAGTTCCGAAGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAAACTCTGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCGGCAACGGCACGAACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGC-CGAAGGCAACG-CTCGGCGAGTGTATTGCACTGGCGATGGAAACGAACGGATCGATATTTGGT-GGGCACAAGCTGCGCCAGGATCGTTCGAACACGGCGAATACGAAGAAGTTTATCAAGGTGTTTGCAAAGCGTATCGCAGCGTCAGCGCTTCCGAACAGCTGCCAAACGTGCGAGTGCACCGGGCACAATACCGGAGTGGCGTACATGCAATGTACGCCGTGTAACTATCCTTCACCATTCTCGATGGAGGATGGCAGCATGACGGACGATATGTTCCTATCCGTCATGCAGCCGGATGGTGAATTCGATTACTACGACTTTGAGGGGGGAATTTAAAGAATGAGGGAACTTCAAAGAATGCAAGAAATTTTTCGTTAAGATTAGTATGTAAAATGATTATGTTACGTTCTACTGTGAAATAATGTAAGGAGAATAACCAAAAG]

[+] EMBL AL694539             [AGATCCCCGAGGTTAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAGTTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCATATATTCAGGCATGTGGCCTGGAGCGAACACCTTTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGAAGCTACGTTCCGGAGGGTAGCTTTGTGCCGCTGCGTAACGAACGAAGTTCCGAAGGCGG CGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM624612             [                                                                                                                                                                                        ACGTAACTCCGCTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCATATATTCAGGCATGGGGCCTGGAGCGAACACCTTTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGAAGCTACGTTCCGGAGGGTAGCTTTGTGTTGCTGCGTAACGAA GAAGTTCCGAAGGCGGCCGATGTGGTGCTCACCCTCGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX607511             [                                                                                                                                                                                                                                                                        GCATATATTCAGGCATGTGGCCTGGAGCGAACACCTTTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGAAGCTACGTTCCGGAGGGTAGCTTTGTGCCGCTGCGTAACGAA GAAGTTCCGAAGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAAACTCTGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCGGCAACGGCACGAACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGC CGAAGGCAACG CTCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08HVU             [                                                                                                                                                                                                                                                                                                                            ATTGCATCAGCTGTTTGTTAATGAACGGAAGCTACGTTCCGGA GGTAGTTTTGTGCCGCTGCGTAACGAA GAAGTTCCCAAGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGGTTTGTGGAGACAAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTGCAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAGACTCGGTATTCGAGATGCACAATGGAACCCAACCGTTCTTCGATCATGTCAAGATCGGCAATGGTACGAACGAAGACATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGTACTGCTGCCGTGTTCACGGTGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGC CGAAG  AACGCCTCGGCGAGTGTATTGCACTGGCGATGGAAACGAACGGATCGATATTTGGT GGGCACAAGCTGCGCCAGGAT                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM593592             [                                                                                                                                                                                                                                                                                                                                                                                                            ccgGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAAACTCTGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCGGCAACGGCACGAACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGC CGAAGGCAACG CTCGGCGAGTGTATTGCACTGGCGATGGAAACGAACGGATCGATATTTGGT GGGCACAAGCTGCGCCAGGATCGTTCGAACACGGCG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM657080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgTGCTAGTGAGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAAACTCTGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCGGCAACGGCACGAACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGC CGAAGGCAACG CTCGGCGAGTGTATTGCACTGGCGATGGAAACGAACGGATCGATATTTGGT GGGCACAAGCTGCGCCAGGATCGTTCGAACACGGCGAATACGAAGAAGTTTATCAAGGTGTTTGCAAAGCGTATCG                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08HVV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAGACTCGGTATTCGAGATGCACAATGGAACCCAACCGTTCTTCGATCATGTCAAGATCGGCAATGGTACGAACGAAAACATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCATCGAAAACGTTCGAACTGCTGCCGTGTTCACGGTGTGTCGCGTCCAAGATGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCAAATTTTGGCGGACCAGGAGCTATCATTCCAGGAGTAACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAAATTCAACTGCGCGAAGGCAACG CTCGGCGAGTGTATTGAACTGGCGATGGAAACGAACGGATCGATATTTGGTGGGGAACAAG TGCGCCAGGATCGTTCGAACACGGCGAATACGAAGAAGTTTATCAAGGTGTTTGCAAAGCGTATCGCAGCGTCAGCGCTTCCGAACAGCTGCCAAACGTGCGAGTGCACCGGGCACAATACCGGAGTGGCGTACATGCAATGTACGCCGTGTAACTATCCTTCACCATTCTCGATGGAGGATGGCAGCATGACGGACGATATGTTCCTATCCGTCATGCAGCCGGATGGTGAATTCGATTACTACGACTTTGAGGGGGGAATTTAAAGAATGAGGGAACTTCAAAGAATGCAAGAAATTTTTCGTTAAGATTAGTATGTAAAATGATTATGTTACGTTCTACTGTGAAATAATGTAAGGAGAATAACCAAAAG]




>consensus_8675#0
AGATCCCCGAGGTTAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGC
TCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGT
CAGTTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTG
GTGGACGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGAT
CGGGGCGCATGTACTGCTGCGATTGCATATATTCAGGCATGTGGCCTGGAGCGAACACCT
TTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGAAGCTACGTTCCGGAG
GGTAGCTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGTTTATC
ATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGCATCAACCTGCTAGTG
AGCGGAATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTG
ACATTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTGGAAACTCTGTA
TTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCGGCAACGGCACG
AACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCCGACCGGGTGCA
TCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGATGAAGCTTGAC
TTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACATTCTGGCGGAC
CAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAATGGATAGCCAG
ATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAACTGCGGCGACAA
ATTCAACTGCCGAAGGCAACGCTCGGCGAGTGTATTGCACTGGCGATGGAAACGAACGGA
TCGATATTTGGTGGGCACAAGCTGCGCCAGGATCGTTCGAACACGGCGAATACGAAGAAG
TTTATCAAGGTGTTTGCAAAGCGTATCGCAGCGTCAGCGCTTCCGAACAGCTGCCAAACG
TGCGAGTGCACCGGGCACAATACCGGAGTGGCGTACATGCAATGTACGCCGTGTAACTAT
CCTTCACCATTCTCGATGGAGGATGGCAGCATGACGGACGATATGTTCCTATCCGTCATG
CAGCCGGATGGTGAATTCGATTACTACGACTTTGAGGGGGGAATTTAAAGAATGAGGGAA
CTTCAAAGAATGCAAGAAATTTTTCGTTAAGATTAGTATGTAAAATGATTATGTTACGTT
CTACTGTGAAATAATGTAAGGAGAATAACCAAAAG

consensusID : consensus_8675#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1368
fasta sequence

                              [GATGGAGTTAGAGCAGAAGCTTCCCATGTCGTGGCATGCGTTCAATGAAACGCCCAAGTTTGAGGAGATACCGGAGTTTAAGTACATCAGCAAAATACAGGACCTCTTTGCCGGTAGCAATACAACGATCTGGACAGTGTACAACGATATCTGTCCGTACGTGGATCTGGAGGTGTGGCTTCCGCCCTTTAAGAGTACCGCACTACTGATCGGCTCGAGGCACTATATGTCGTTTGATAAACGATTTGTTTCGTTGGATCTGAATGATTCGAACCGCTGCCAGTATCTGTTGGCGCATGATTACTACAATCGAACGATAACGCTGTTGTTGGAATCATCGGATCTGAAGTACGGCCAAACTTCCAGACAAATTACACTCATTATCGATGACAATACGCTTGCGATCGACGTGTTCAACATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGTATCACTTCCACCAATCGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAGTTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCAAAGCGTATC--GCAGCGTCAGCGCT--TCCGAACAGCTGCCAAACGTCCGAATAATTGCATCAGCTGTTTGTTAATGAACGGAAGCTACGTTCCGGAGGGTAGTTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGGTTTGTGGAGACCAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTGCAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTCGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGGTGGAAACTCGGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCATGTCAAGATCNGCAATGGTACGAACGAANACATCTTCGACGCCATCACAATGGGCTCAAACCTGGTATTCCGAC]

[+] EMBL BX607555             [GATGGAGTTAGAGCAGAAGCTTCCCATGTCGTGGCATGCGTTCAATGAAACGCCCAAGTTTGAGGAGATACCGGAGTTTAAGTACATCAGCAAAATACAGGACCTCTTTGCCGGTAGCAATACAACGATCTGGACAGTGTACAACGATATCTGTCCGTACGTGGATCTGGAGGTGTGGCTTCCGCCCTTTAAGAGTACCGCACTACTGATCGGCTCGAGGCACTATATGTCGTTTGATAAACGATTTGTTTCGTTGGATCTGAATGATTCGAACCGCTGCCAGTATCTGTTGGCGCATGATTACTACAATCGAACGATAACGCTGTTGTTGGAATCATCGGATCTGAAGTACGGCCAAACTTCCAGACAAATTACACTCATTATCGATGACAATACGCTTGCGATCGACGTGTTCAACATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTGCAGCTTGCGCTACCATATTTGCTGGCTGGAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX615127             [                                                                                                                                                                                                                                                                                                                                                                                AAATTACACTCATTATCGATGACAATACGCTTGCGATCGACGTGTTCAACATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGTATCACTTCCACCAATCGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAGTTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCAAAGCGTATC  GCAGCGTCAGCGCT  TCCGAACAGCTGCCAAACGT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX627590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGGCAAGATGGCGGGACTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGAATCACTTCCACCAATCGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCGAACGAGCTAAGTCAGCTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTCTACGAGATGTGTATGGACCTGGGACATAATCTAATGCCGGATCGGGGCGCATGTACTGCTGCGATTGCATA CAT TCAGGCA TGT AGC CTGGAGCGAACACCTTTGCGAGTTCCGAATAATTGCATCAGCTGTTTGTTAATGAACGGAAGCTACGTTCCGGAGGGTAGTTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGTTTATCATTGAAGCAAAGCCCTGCAACGAACGGTTTGTGGAGACCAAGAGCATCAACCTGCTAGTGAGCGGAATCGCCCGGGAGCTGCAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACATTCGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGGTGGAAACTCGGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCATGTCAAGATCNGCAATGGTACGAACGAANACATCTTCGACGCCATCACAATGGGCTCAAACCTGGTATTCCGAC]




>consensus_8675#1
GATGGAGTTAGAGCAGAAGCTTCCCATGTCGTGGCATGCGTTCAATGAAACGCCCAAGTT
TGAGGAGATACCGGAGTTTAAGTACATCAGCAAAATACAGGACCTCTTTGCCGGTAGCAA
TACAACGATCTGGACAGTGTACAACGATATCTGTCCGTACGTGGATCTGGAGGTGTGGCT
TCCGCCCTTTAAGAGTACCGCACTACTGATCGGCTCGAGGCACTATATGTCGTTTGATAA
ACGATTTGTTTCGTTGGATCTGAATGATTCGAACCGCTGCCAGTATCTGTTGGCGCATGA
TTACTACAATCGAACGATAACGCTGTTGTTGGAATCATCGGATCTGAAGTACGGCCAAAC
TTCCAGACAAATTACACTCATTATCGATGACAATACGCTTGCGATCGACGTGTTCAACAT
TTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGT
GGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTG
CAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGC
GGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGTATCACTTCCACCAATCG
ATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGAC
GGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAGTT
GTGTGACAGTTTCTTCCACCAGAAGCTGTCGTATCTGGCAACATGTTTCTCCGTGGTGGA
CGTAACTCCGTTCTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATCGGGG
CGCATGTACTGCTGCGATTGCAAAGCGTATCGCAGCGTCAGCGCTTCCGAACAGCTGCCA
AACGTCCGAATAATTGCATCAGCTGTTTGTTAATGAACGGAAGCTACGTTCCGGAGGGTA
GTTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGTTTATCATTG
AAGCAAAGCCCTGCAACGAACGGTTTGTGGAGACCAAGAGCATCAACCTGCTAGTGAGCG
GAATCGCCCGGGAGCTGCAAGACTTGGGCATCGATGACACGCTGTTCGGTGTGGTGACAT
TCGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGGTGGAAACTCGGTATTCG
AGATGCACAATGGAACGCAACCGTTCTTCGATCATGTCAAGATCNGCAATGGTACGAACG
AANACATCTTCGACGCCATCACAATGGGCTCAAACCTGGTATTCCGAC

consensusID : consensus_8675#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 875
fasta sequence

                              [GCAGAATCGCCACGAGNNATTATCGATGGCAATACGCTTGCGATCGACTGTGTTCAACATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGAATCACTTCCACCAATCGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCGAACGAGCTAAGTCAGCTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTTCTACGAGATGTGTATGGATTCGGGACATATCTAATGCCGGATCGGGGCGCATGTACTGCTTGCGACTTGCATATATTCAGGCATGTAGGCCATGGGCAGCGGAACACCATTTTGGNCGAAAGTTACCAAAAAGTAAATAGCCATCNACGCTGTACNACGTCTACACACGTTCGNACACTNGGGCAACACGGCCTTAAACNGGTTCCCCGGANAACAGANGCGTTAAANCCACTANCTAAGGGTGCCCGGNCATCNGGCGCGATTAAACCGCGAAGAGACAACAGTTCCCCCACAAACGGGGCACNGAGCCCCGGCAATAGNTGNGCGANGGGATCGAACAACTCAACTTGGGCAGCAGCGCAAAAAAGCGCCCCCTGAGCA]

[+] EMBL BX467233             [GCAGAATCGCCACGAGNNATTATCGATGGCAATACGCTTGCGATCGACTGTGTTCAACATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGAATCACTTCCACCAATCGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCGAACGAGCTAAGTCAGCTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTTATCTGGCAACATGTTTCTCCGTGGTGGACGTAACTCCGTTTCTACGAGATGTGTATGGATTCGGGACATATCTAATGCCGGATCGGGGCGCATGTACTGCTTGCGACTTGCATATATTCAGGCATGTAGGCCATGGGCAGCGGAACACCATTTTGGNCGAAAGTTACCAAAAAGTAAATAGCCATCNACGCTGTACNACGTCTACACACGTTCGNACACTNGGGCAACACGGCCTTAAACNGGTTCCCCGGANAACAGANGCGTTAAANCCACTANCTAAGGGTGCCCGGNCATCNGGCGCGATTAAACCGCGAAGAGACAACAGTTCCCCCACAAACGGGGCACNGAGCCCCGGCAATAGNTGNGCGANGGGATCGAACAACTCAACTTGGGCAGCAGCGCAAAAAAGCGCCCCCTGAGCA]




>consensus_8675#2
GCAGAATCGCCACGAGNNATTATCGATGGCAATACGCTTGCGATCGACTGTGTTCAACAT
TTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACGGT
GGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGTTG
CAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATGGC
GGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGAATCACTTCCACCAATCG
ATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCGAC
GGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCGAACGAGCTAAGTCAGCT
GTGTGACAGTTTCTTCCACCAGAAGCTGTCGTTATCTGGCAACATGTTTCTCCGTGGTGG
ACGTAACTCCGTTTCTACGAGATGTGTATGGATTCGGGACATATCTAATGCCGGATCGGG
GCGCATGTACTGCTTGCGACTTGCATATATTCAGGCATGTAGGCCATGGGCAGCGGAACA
CCATTTTGGNCGAAAGTTACCAAAAAGTAAATAGCCATCNACGCTGTACNACGTCTACAC
ACGTTCGNACACTNGGGCAACACGGCCTTAAACNGGTTCCCCGGANAACAGANGCGTTAA
ANCCACTANCTAAGGGTGCCCGGNCATCNGGCGCGATTAAACCGCGAAGAGACAACAGTT
CCCCCACAAACGGGGCACNGAGCCCCGGCAATAGNTGNGCGANGGGATCGAACAACTCAA
CTTGGGCAGCAGCGCAAAAAAGCGCCCCCTGAGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8675#1      GATGGAGTTAGAGCAGAAGCTTCCCATGTCGTGGCATGCGTTCAATGAAACGCCCAAGTT 60
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TGAGGAGATACCGGAGTTTAAGTACATCAGCAAAATACAGGACCTCTTTGCCGGTAGCAA 120
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TACAACGATCTGGACAGTGTACAACGATATCTGTCCGTACGTGGATCTGGAGGTGTGGCT 180
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TCCGCCCTTTAAGAGTACCGCACTACTGATCGGCTCGAGGCACTATATGTCGTTTGATAA 240
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      ACGATTTGTTTCGTTGGATCTGAATGATTCGAACCGCTGCCAGTATCTGTTGGCGCATGA 300
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TTACTACAATCGAACGATAACGCTGTTGTTGGAATCATCGGATCTGAAGTACGGCCAAAC 360
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TTCCAGACAAATTAC-ACTCATTATCGATGACAATACGCTTGCGATCGAC-GTGTTCAAC 418
consensus_8675#2      --GCAGAATCGCCACGAGNNATTATCGATGGCAATACGCTTGCGATCGACTGTGTTCAAC 58
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      ATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACG 478
consensus_8675#2      ATTTCGGTGAAAATCAACAACAAGGCGACTGCACTGCCCGCAATGATCGGTACGCAGACG 118
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      GTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGT 538
consensus_8675#2      GTGGTTTTCCAACAATCGGATCAGCTGTGGATACAATCGCAACGTGGCTTCCTGGTTGGT 178
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      TGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATG 598
consensus_8675#2      TGCAGCTTGCGCTACCATATTTGCTGGCTGGAACTGAGTGGATGGTACTTTGGCAAGATG 238
consensus_8675#0      ------------------------------------------------------------
                                                                                  

consensus_8675#1      GCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGTATCACTTCCACCAAT 658
consensus_8675#2      GCGGGGCTGCTTGGAACGATGAACAACGAAATGTTTGACGATCGAATCACTTCCACCAAT 298
consensus_8675#0      --------------------------------------------------------AGAT 4
                                                                                **

consensus_8675#1      CGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCG 718
consensus_8675#2      CGATACAACGAAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCG 358
consensus_8675#0      CCCCG-AGGTTAACAGAAGAACAGTTCCTCAACAGTTGGGCGTTGCCGGGCTGTAGCTCG 63
                      *     *    *************************************************

consensus_8675#1      ACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAG 778
consensus_8675#2      ACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCGAACGAGCTAAGTCAG 418
consensus_8675#0      ACGGTTACTGCGACGAACCATACCAGCAACTTTTACAGTGCCTCAAACGAGCTAAGTCAG 123
                      ******************************************** ***************

consensus_8675#1      TTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGT-ATCTGGCAACATGTTTCTCCGTGGT 837
consensus_8675#2      CTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGTTATCTGGCAACATGTTTCTCCGTGGT 478
consensus_8675#0      TTGTGTGACAGTTTCTTCCACCAGAAGCTGTCGT-ATCTGGCAACATGTTTCTCCGTGGT 182
                       ********************************* *************************

consensus_8675#1      GGACGTAACTCCGTT-CTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATC 896
consensus_8675#2      GGACGTAACTCCGTTTCTACGAGATGTGTATGGATTCGGGACATA-TCTAATGCCGGATC 537
consensus_8675#0      GGACGTAACTCCGTT-CTACGAGATGTGTATGGATTTGGGACATAATCTAATGCCGGATC 241
                      *************** ******************** ******** **************

consensus_8675#1      GGGGCGCATGTACTGCT-GCGA-TTGCAAAGCGTATCGCAGCGTCAGCGCT--TCCGAAC 952
consensus_8675#2      GGGGCGCATGTACTGCTTGCGACTTGCATA---TATTCAGGCATGTAGGCC--ATGG--- 589
consensus_8675#0      GGGGCGCATGTACTGCT-GCGA-TTGCATA---TATTCAGGCATGTGGCCTGGAGCGAAC 296
                      ***************** **** ***** *   ***    ** *     *      *   

consensus_8675#1      AGCTGCCAAACGTCCGAATAATTGCATCAGCTGTTTGTTAATGAACGGA-AGCTACGTTC 1011
consensus_8675#2      -GCAGCGGAACACCATTTTGGNCGAA--AGTTACCAAAAAGTAAATAGCCATCNACGCTG 646
consensus_8675#0      ACCTTTGCGAGTTCCAAATAATTGCATCAGCTGTTTGTTAATGAATGGA-AGCTACGTTC 355
                        *      *   *    *    * *  ** *       * * **  *  * * *** * 

consensus_8675#1      CGGAGGGTAGTTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGT 1071
consensus_8675#2      TACNACGT--CTACACACGTTCGNACACTNGGGCAACACGGCCTTAAACNGGTTCCCCGG 704
consensus_8675#0      CGGAGGGTAGCTTTGTGCCGCTGCGTAACGAAGAAGTTCCGAAGGCGGCCGATGTGGTGT 415
                            **   *     *    *   *     * *   * *       * * *     * 

consensus_8675#1      TTATCATTGAAGCAAAGCCCTGCAACGAACGGTTTGTGGAGACCAAGAGC-ATCAACCTG 1130
consensus_8675#2      ANAACAGANGCGTTAAANCCACTANCTAAGGGTGCCCGGNCATCNGGCGCGATTAAACCG 764
consensus_8675#0      TTATCATTGAAGCAAAGCCCTGCAACGAACGATTTGTGGAGACGAAGAGC-ATCAACCTG 474
                        * **     *  **  **   * * ** * *    **  *    * ** ** ** * *

consensus_8675#1      CTAGTGAGCGG-AATCGCCCGGGAGCTGCAAGACTTGGGCATCGATGACACGCTGTTCGG 1189
consensus_8675#2      CGAAGAGACAACAGTTCCCCCACAAACGGGGCACN-GAGCCCCGGCAATA-GNTGNGCGA 822
consensus_8675#0      CTAGTGAGCGG-AATCGCCCGGGAGCTACAAGACTTGGGCATCGATGACACGCTGTTCGG 533
                      * *     *   * *  ***   *        **  * **  **   * * * **  ** 

consensus_8675#1      TGTGGT--GACA--TTCGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGGTG 1245
consensus_8675#2      NGGGATCGAACAACTCAACTTGGGCAGCAGCGCAAAAAAGCGCCCCCTGAGCA------- 875
consensus_8675#0      TGTGGT--GACA--TTTGGTGGCTCGGCTCCGTTTGATCGTGCTCACAGTGTGGTGGTTG 589
                       * * *   ***  *    * *  * **  **    *  * ** * * * *         

consensus_8675#1      GAAACTCGGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCATGTCAAGATCN 1305
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      GAAACTCTGTATTCGAGATGCACAATGGAACGCAACCGTTCTTCGATCACGTCAAGATCG 649
                                                                                  

consensus_8675#1      GCAATGGTACGAACGAANACATCTTCGACGCCATCACAATGGGCTCAAACCTGGTATTCC 1365
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      GCAACGGCACGAACGAAGATATCTTCGACGCCATCACAATGGCCTCAAACCTGGTGTTCC 709
                                                                                  

consensus_8675#1      GAC--------------------------------------------------------- 1368
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      GACCGGGTGCATCGAAAACGTTCGTACTGCTACCGTGTTCACGATGTGTCGCGTCCAAGA 769
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      TGAAGCTTGACTTTTCGTCGATCGTACAGCTGCTCGTCGAGAATGACATCAAGCTGCACA 829
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      TTCTGGCGGACCAGGAGCTATCATTCCAGAAGTCACGCGTGTCCCGCCTGTTCTACGGAA 889
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      TGGATAGCCAGATGGTTTACACGAAGAAGGACGTGAAGGAGCTAATCGGCGATGCTGAAC 949
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      TGCGGCGACAAATTCAACTGCCGAAGGCAACGCTCGGCGAGTGTATTGCACTGGCGATGG 1009
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      AAACGAACGGATCGATATTTGGTGGGCACAAGCTGCGCCAGGATCGTTCGAACACGGCGA 1069
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      ATACGAAGAAGTTTATCAAGGTGTTTGCAAAGCGTATCGCAGCGTCAGCGCTTCCGAACA 1129
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      GCTGCCAAACGTGCGAGTGCACCGGGCACAATACCGGAGTGGCGTACATGCAATGTACGC 1189
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      CGTGTAACTATCCTTCACCATTCTCGATGGAGGATGGCAGCATGACGGACGATATGTTCC 1249
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      TATCCGTCATGCAGCCGGATGGTGAATTCGATTACTACGACTTTGAGGGGGGAATTTAAA 1309
                                                                                  

consensus_8675#1      ------------------------------------------------------------
consensus_8675#2      ------------------------------------------------------------
consensus_8675#0      GAATGAGGGAACTTCAAAGAATGCAAGAAATTTTTCGTTAAGATTAGTATGTAAAATGAT 1369
                                                                                  

consensus_8675#1      ----------------------------------------------
consensus_8675#2      ----------------------------------------------
consensus_8675#0      TATGTTACGTTCTACTGTGAAATAATGTAAGGAGAATAACCAAAAG 1415