cluster # 8680

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Anopheles gambiae
cluster # 8680 cluster # 8680 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8680#0 length = 1237 sequences # 6
consensus_8680#1 length = 737 sequences # 1
consensus_8680#2 length = 672 sequences # 1

consensus_8680#3 length = 671 sequences # 1
consensus_8680#4 length = 646 sequences # 1
consensus_8680#5 length = 83 sequences # 1

consensusID : consensus_8680#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1237
fasta sequence

                              [CGCGTCCGCCCACGCGTCCG---GCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG-TTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCGCGCTC-GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT]

[+] EMBL BM645839             [CGCGTCCGCCCACGCGTCCG   GCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTTTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM615594             [     CCGCGGACGCGTGGGTTTGCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCTATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATATAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAAATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG CTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08NJ4             [                                 GTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG TTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGAAACGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCATGTCGCGCTC GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAAAAAAAAAGCGCGTTCTTTTTGTTGTGCTATTGTACTGAACGAGAATAaca                                                                                                                                                                                                   ]
[-] EMBL CNS08NJ5             [                                                                                                                                                                                                                                                                                      TGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTTTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGGTCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCTTTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTTTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGGTTTCG TGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTT CTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCGCGCTC GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT]
[-] EMBL CNS08FMY             [                                                                                                                                                                                                                                                                                                                                                                                               CGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG TTTCCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTG TCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTTTCGCGCTCGGGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCCTCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTTACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGA  ]
[-] EMBL CNS08CMV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGAT                                                                                                                                                           ]




>consensus_8680#0
CGCGTCCGCCCACGCGTCCGGCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCAT
TTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATC
AGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCA
AGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATG
GACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCG
GCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGA
TTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCT
ACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACA
TCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAA
GCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGA
ACGGTTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACC
ACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGT
CGAAGGGTTGCTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCA
AAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCGCGCTCG
GCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATT
CCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCG
TACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCT
ATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAG
ATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGT
GCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGG
ACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT

consensusID : consensus_8680#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 737
fasta sequence

                              [AAGGGTTTTCTCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACTTTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGAGCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAAGGACAACTGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTGTGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACATACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGACTATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTACGTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGATAACTACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCCCGAACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAAGCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCTACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGTAGGTTGTTCTAG]

[+] EMBL BX616141             [AAGGGTTTTCTCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACTTTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGAGCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAAGGACAACTGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTGTGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACATACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGACTATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTACGTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGATAACTACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCCCGAACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAAGCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCTACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGTAGGTTGTTCTAG]




>consensus_8680#1
AAGGGTTTTCTCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCA
AAAGACGACTTTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAAC
AGAAGGCCGAGCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGG
ACGATGTAAAGGACAACTGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGA
CCGTGGTGTGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACA
CACACACATACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTAT
AGAAGGACTATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGT
GTGGGTACGTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTT
GATAACTACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATC
AGAGCCCCGAACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCA
TAAAAGCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCAC
CAGCTACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCT
GTAGTAGGTTGTTCTAG

consensusID : consensus_8680#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence

                              [CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCAGAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCTCCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGACTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGCGAATTCCGATCCGATGATACCTGCCTATCCACGGGATGCCTCTGCGTGTGTGTGTCCCTCCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAGCAGGGACTGCGCCCCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACGAACGCGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCACGAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCTCCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAATGATGAGAGTTAGAAAATCGAGCA]

[+] EMBL BM636067             [CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCAGAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCTCCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGACTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGCGAATTCCGATCCGATGATACCTGCCTATCCACGGGATGCCTCTGCGTGTGTGTGTCCCTCCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAGCAGGGACTGCGCCCCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACGAACGCGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCACGAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCTCCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAATGATGAGAGTTAGAAAATCGAGCA]




>consensus_8680#2
CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGAAGAAGAAG
AAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCAGAACGGTA
TTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCTCCAATTCT
CCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGACTGCTGCG
CGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGCGAATTCCG
ATCCGATGATACCTGCCTATCCACGGGATGCCTCTGCGTGTGTGTGTCCCTCCCTTCCCC
CTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAGCAGGGACTGCGCCCC
GACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACGAACGCGGGCTAAACCC
GTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCACGAACACGGATGG
GGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCTCCTCCAAGCCGA
CCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAATGATGAGAGTTA
GAAAATCGAGCA

consensusID : consensus_8680#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAACTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTTCTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGACAGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTGTCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCACTTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTCGTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGCATGACATCGCTGTCGGATTCGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTGAAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTGTGATCGCTTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTTGTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGCCCGCGATGTAGAACTTCAAAGGAAA]

[+] EMBL BM630484             [CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAACTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTTCTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGACAGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTGTCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCACTTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTCGTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGCATGACATCGCTGTCGGATTCGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTGAAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTGTGATCGCTTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTTGTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGCCCGCGATGTAGAACTTCAAAGGAAA]




>consensus_8680#3
CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAACTCGCCAATTG
GCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTTCTCCCGTGCGC
TAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGACAGCAGACGGCC
GGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTGTCGCAAGGTAC
CGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCACTTCCACTTCTT
TCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTCGTCAGCCACTT
CCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGCATGACATCGCT
GTCGGATTCGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTGAAGTGATCGATG
ATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTGTGATCGCTTGTTGTGCTCGCC
TCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTTGTCAGTTGGCAATT
TGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGCCCGCGATGTAGAAC
TTCAAAGGAAA

consensusID : consensus_8680#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 646
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATATTTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCTCTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAACCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCCGATCGTTCGCACACAAACACACACACACACACTCGGTAGCTTTCTATTTGGTGCCCGAACGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTTCAGTGATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCACGGAGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACCGGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCACGCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAATTTATCGAAATTGCTTGCAGGGAAACAAGATCGAC]

[+] EMBL BM639367             [CCGCCCACGCGTCCGCCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATATTTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCTCTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAACCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCCGATCGTTCGCACACAAACACACACACACACACTCGGTAGCTTTCTATTTGGTGCCCGAACGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTTCAGTGATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCACGGAGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACCGGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCACGCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAATTTATCGAAATTGCTTGCAGGGAAACAAGATCGAC]




>consensus_8680#4
CCGCCCACGCGTCCGCCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATG
TCCGATTCCGGATATTTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCC
GGGATTCCTTCCGCTCTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGC
CCACGCCACCACCAACCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAA
TTCCGTTCCATATCCGATCGTTCGCACACAAACACACACACACACACTCGGTAGCTTTCT
ATTTGGTGCCCGAACGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTG
TTTTAGTTCAGTGATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCA
GGAAGGCAAGGCACGGAGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGC
GGAACCGGAACCGGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGG
CCAGACGATCACGCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGA
TGACGATGGAATTTATCGAAATTGCTTGCAGGGAAACAAGATCGAC

consensusID : consensus_8680#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 83
fasta sequence

                              [CGCTTTTTTATTTTAAAAACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCACGTCA]

[+] EMBL CNS08J6U             [CGCTTTTTTATTTTAAAAACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCACGTCA]




>consensus_8680#5
CGCTTTTTTATTTTAAAAACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAA
GGGGGAATATATACAGCACGTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8680#0      CGCGTCCGCCCACGCGTCCGGCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCAT 60
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      TTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATC 120
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      AGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCA 180
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      --------------------------------------------------AAGGGTTTTC 10
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      AGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATG 240
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      TCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACT 70
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      GACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCG 300
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ---------------------------------------------CCGCCCACGCGTCCG 15
consensus_8680#2      --------CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGA 52
consensus_8680#1      TTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGA 130
consensus_8680#3      -----------CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAA 49
                                                                                  

consensus_8680#0      GCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGA 360
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      CCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATAT 75
consensus_8680#2      AGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCA 112
consensus_8680#1      GCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAA 190
consensus_8680#3      CTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTT 109
                                                                                  

consensus_8680#0      TTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCT 420
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      TTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCT 135
consensus_8680#2      GAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCT 172
consensus_8680#1      GGACAAC--TGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTG 248
consensus_8680#3      CTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGAC 169
                                                                                  

consensus_8680#0      ACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACA 480
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      CTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAA 195
consensus_8680#2      CCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGA 232
consensus_8680#1      TGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACA 308
consensus_8680#3      AGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTG 229
                                                                                  

consensus_8680#0      TCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAA 540
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      CCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCC 255
consensus_8680#2      CTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGC 292
consensus_8680#1      TACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGAC 368
consensus_8680#3      TCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCAC 289
                                                                                  

consensus_8680#0      GCAAGATCACGTCGATGCTGTGGGGCGCCCTGGAC-GAGACGGTCATTACCGGGCACGAG 599
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      GATCGTTCGCACACAAACACACACACACACACTCG-GTAGCTTTCTATTTGGTGCCCGAA 314
consensus_8680#2      GAATTCCGATCCGATGATACCTGCCTATCCACGGG-ATGCCTCTGCGTGTGTGTGTCCCT 351
consensus_8680#1      TATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTAC 428
consensus_8680#3      TTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTC 349
                                                                                  

consensus_8680#0      AACGGTTCGCTGCG-CATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGT-GAACG 657
consensus_8680#5      -----------------------------------------CGCTTTTTTATTT-TAAAA 18
consensus_8680#4      CGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTT-CAGTG 373
consensus_8680#2      CCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAG-CAGGG 410
consensus_8680#1      GTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGA-TAACT 487
consensus_8680#3      GTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGC 409
                                                                                  

consensus_8680#0      ACCACACCGCCAGCATTAC---GGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCT 714
consensus_8680#5      ACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCA 78
consensus_8680#4      ATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCA 433
consensus_8680#2      ACTGCGCC-CCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACG-AACG 468
consensus_8680#1      ACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCC 547
consensus_8680#3      ATGACATCGCTGTCGGATT-CGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTG 468
                      *                                                 *         

consensus_8680#0      CGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGA 774
consensus_8680#5      CGTCA------------------------------------------------------- 83
consensus_8680#4      CGG-AGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACC 492
consensus_8680#2      CGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCAC 528
consensus_8680#1      CG--AACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAA 605
consensus_8680#3      AAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTG--TGATCGC 526
                                                                                  

consensus_8680#0      CGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCG 834
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      GGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCAC 552
consensus_8680#2      GAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCT 588
consensus_8680#1      GCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCT 665
consensus_8680#3      TTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTT 586
                                                                                  

consensus_8680#0      CGCTCGGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGT 894
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      GCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAAT 612
consensus_8680#2      CCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAA 648
consensus_8680#1      ACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGT 725
consensus_8680#3      GTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGC 646
                                                                                  

consensus_8680#0      TCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGAC 954
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      TTATCGAAATTGCTTGCAGGGAAACAAGATCGAC-------------------------- 646
consensus_8680#2      TGATGAGAGTTAGAAAATCGAGCA------------------------------------ 672
consensus_8680#1      AGGTTGTTCTAG------------------------------------------------ 737
consensus_8680#3      CCGCGATGTAGAACTTCAAAGGAAA----------------------------------- 671
                                                                                  

consensus_8680#0      TCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGT 1014
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      TGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAG 1074
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      CGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCC 1134
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      CAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGG 1194
consensus_8680#5      ------------------------------------------------------------
consensus_8680#4      ------------------------------------------------------------
consensus_8680#2      ------------------------------------------------------------
consensus_8680#1      ------------------------------------------------------------
consensus_8680#3      ------------------------------------------------------------
                                                                                  

consensus_8680#0      TACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT 1237
consensus_8680#5      -------------------------------------------
consensus_8680#4      -------------------------------------------
consensus_8680#2      -------------------------------------------
consensus_8680#1      -------------------------------------------
consensus_8680#3      -------------------------------------------