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Anopheles gambiae
cluster # 8701 cluster # 8701       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8701#0 length = 1727 sequences # 8  
consensus_8701#1 length = 1488 sequences # 3  

consensusID : consensus_8701#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1727
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGCGAACTTCAATTAAGGGCTTTTTTATATTTTTATATCGGAAGCTGGCT-CGATAGTTTG-CCGTGATTTTCTTCCGAGACTCGTGCTCGACAACAAGTGGCCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACAGTGAATCGTTTTCTTGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAACGACGATAATGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCGATGCTGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTGCAGCAGCAGCAACCGTCGCGCGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTTATTTCATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCGCCGCGGGCAAG-TCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGATTTGCACGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGCATATTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTCGCCGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTCGAAGATGCACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAGTACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACC-AGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGAC-GGACGAGGATCAGGACTCGCTGAAGGAAGCGC-TGCTCGAC-ACGAA-CCCGTACCTGTTGGGCGTCA-CGATTGTGGTGACGCTTCTGCACAGTGTGTTCGAGC-TGCTGGCATTTAAGAACGACATCCAGTTC-TGG-AACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGG--TGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTAC-GTG-CTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTTCATGGGACCCGATCCAGCTGTAACCAATAATATGAAAGCTTTACTAGGTTCATTCGTTTCTCAAAAAGACTACGTTTAGCAGTAATAGTGGTGCCGGACGGAAGAAAAAAACGAAATGAGCTGTGGTATGTTTTACATGATGCAAGTACATGTTAGTGTAGTATGATAACTGATGAAAGTGTGAGTTTCAACACCGAACAAAGGGATAACGGTTAAAAAAAAAAAAA]

[+] EMBL BM626783             [CCGCCCACGCGTCCGCCCACGCGTCCGGCGAACTTCAATTAAGGGCTTTTTTATATTTTTATATCGGAAGCTGGCTCCGATAGTTTGCCCGTGATTTTCTTCCGAGACTCGTGCTCGACAACAAGTGGCCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACAGTGAATCGTTTTCTTGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAACGACGATAATGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCGATGCTGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTGCAGCAGCAGCAACCGTCGCGCGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTTATTTCATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCGCCGCGGGCAAG TCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08YJA             [                                                                       TGGCT CGATAGTTTG CCGTGATTTTCTTCCGAGACTCGTGCTCGACAACAAGTGGTCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACAGTGAATCGTTTTCTTGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAACGACGATAATGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCGATGCTGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTACAGCAGCAGCAACCGTCGCGCGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTTATTTCATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCGCCGCGGGCAAG TCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGATTTGCACGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGCATATTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTCGCCGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTAGAAGATGCAaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM606940             [                                                                       ccGCTCCGATAGTTTGCCCGTGATTTTCTTCCGAGACTCGTGCTCGACAACAAGTGGCCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACAGTGAATCGTTTTCTTGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAACGACGATAATGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCGATGCTGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTGCAGCAGCAGCAACCGTCGCGCGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTTATTTCATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCGCCGCGGGCAAG TCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGATTTGCACGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGCATATTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCTGCATACCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08QLA             [                                                                                                                                                                                                                                                                                                                                                                                                                         TGATAACATATTTCATATCATCATTCTTCCGCCGTCCCGCGCCAGATGCCGGGGTGAACCAGCAGGCCGCCGCAG  AAGTTCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGGACCGTTTTCGATTTGCACGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGGATTTTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTTGCCGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTCGAAGATGCACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAGTACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTATCCTACC AGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGAC GGACGAGGATCAGGACTCGCTGAAGGAAGCGC TGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08PBW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCGCCAGATGCCGGGGTGAACCAGCAGGCCGCCGCACGGAAGTTCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGGACCGTTTTCGATTTGCACGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGGATTTTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTTGCCGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTCGAAGATGCACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAGTACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACC AGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGAC GGACGAGGATCAGGACTCGCTGAAGGAAGCGC TGCTCGAC ACGAA CCCGTACCTGTTGGGCGTCA CGATTGTGGTGACGCTTCTGCACAGTGTGTTCGAGC TGCTGG                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM585935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCG GCAGCTGATGAACAATGGATCGATATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTCGCCGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTAGAAGATGCACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCGCTGGATGAGTACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACC AGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAGGCGCTGTCAGGCGGCTCCGAGAC GGACGAGGACCAGGACTCGCTGAAGGAAGCGC TGCTCGAC ACGAA CCCGTACCTGCTGGGCGTCA CGATCGTGGTGACGCTTCTGC                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08QLB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCGAAGATGCACTGGTGGACGATAAGATCCTGGCCAACTGGCATCCGAACCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAGTACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTATCCTACCAAGGC CTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGAC GGACGAGGATCAGGACTCGCTGAAGGAAGCGC TGCTCGAC ACGAA CCCGTACCTGTTGGGCGTCA CGATTGTGGTGACGCTTCTGCACAGTGTGTTCGAGC TGCTGGCATTTAAGAACGACATCCAGTTC TGG AACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGG  TGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTAC GTG CTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTTCATGGGACCCGATCCAGCTGTAACCAATAATATGAAAGCTTTACTAGGTTCATTCGTTTCTCAAAAAGACTACGTTTAGCAGTAATAGTGGTGCCGGACGGAAGAAAAAAACGAAATGAGCTGTGGTATGTTTTACATGATGCAAGTACATGTTAGTGTAGTATGATAACTGATGAAAGTGTGAGTTTCAACACCGAACAAAGGGATAACGGTTAAAAAAAAAAAAA]
[+] EMBL AL695625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gaggttaatCTGGCGCACTGGCAT CGAACCTGA CATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCGCTGGATGAGTACATCAAATTTCTCCCAGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCA ACCGGTGCTGGACCTGAACCTGTCCTACC AGCCG TATCGCTCTTCAAGTGGCAGCTGTACGCCG CCAAGCGATGCGCAACAAATGGGCC ACAACATGTTCACGGAGGCGCTGTCGGGCGGCTCCGAGACGGGACGAGGACCAGGACTCGCTGAAGGAAGCGCTTGCTCGACAACGAACCCCGTACCTGTTGGGCGTCACCGATCGTGGTGACGCTTCTGCACAGTGTGTTCGAGCTTGCTGGCATTTAAGAACGACATCCAGTTCTTGGAAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGGTTGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTG TGTACGGTGCCTGGg                                                                                                                                                                                                                                                                       ]


>consensus_8701#0 CCGCCCACGCGTCCGCCCACGCGTCCGGCGAACTTCAATTAAGGGCTTTTTTATATTTTT ATATCGGAAGCTGGCTCGATAGTTTGCCGTGATTTTCTTCCGAGACTCGTGCTCGACAAC AAGTGGCCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACAGTGAATCGTTTTCT TGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAACGA CGATAATGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCGATGC TGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTGCAGCAGCAGCAACCGTCGCG CGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTTATTT CATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCGCCGC GGGCAAGTCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGATTTGCA CGTGTACATCTCCGAAGATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTTAGTTTG GCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGGCATATT TACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGATATACCT GCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGATTTCGC CGGCAAAAACATGGGCCACGCGAGAGCAATGCTGAGCAAATACAAGCGGATAAAGCGCAC CAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCTCGAAGATGC ACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAACCTGGTGAC GGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAGTACATCAAATT TCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGAT GCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACCA GCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGC CAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGACGGACGAGGATCAGGACTC GCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCTGTTGGGCGTCACGATTGTGGTGAC GCTTCTGCACAGTGTGTTCGAGCTGCTGGCATTTAAGAACGACATCCAGTTCTGGAACAA CCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGTGTTCTTCGGCGTCTTCCAATCGCT GATCGTGCTGCTGTACGTGCTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTT CATGGGACCCGATCCAGCTGTAACCAATAATATGAAAGCTTTACTAGGTTCATTCGTTTC TCAAAAAGACTACGTTTAGCAGTAATAGTGGTGCCGGACGGAAGAAAAAAACGAAATGAG CTGTGGTATGTTTTACATGATGCAAGTACATGTTAGTGTAGTATGATAACTGATGAAAGT GTGAGTTTCAACACCGAACAAAGGGATAACGGTTAAAAAAAAAAAAA



consensusID : consensus_8701#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1488
fasta sequence
                              [CCGCCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCGCTGGATGAGTACATCAAATTTCTCCCAGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACCAGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAGGCGCTGTCGGGCGGCTCCGAGACGGACGAGGACCAGGACTCGCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCTGTTGGGCGTCACGATCGTGGTGACGCTTCTGCACAGTGTGTTCGAGCTGCTGGCATTTAAGAACGACATCCAGTTCTGGAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGTGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTTCATGGGACTCGGCATTGAGGTGTGGAAAATCCAGAAGG-GGTCAATATAAACGTGACCAAGGAGAACCGTGTGCTCGGATTTCTCCCGCGCATCACCTTCACCGACAAGGGATCGTACGTTGAGTCGAGCACGAGGCATTACGATAATCTGGCATTTAAGTATCTCGGATGGGTGTGTTTCCCGCTGCTGGTGGCGTACAGCGTGTACAGCGTCCTGTATCAGGAGCATAAGGGATGGTATTCGTTTGTGCTGAACATGCTGTACGGATACCTGCTCACGTTTGGTTTCATCATGATGACCCCGCAGCTGTTTATCAACTACAAGCTAAAGTCGGTAGCACATCTGCCGTGGCGAATGTTGACCTACAAATTCCTCAACACCTTCATCGATGACATTTTTGCATTTGTCATCAAAATGCCGATGATGTACCGAATCGGCTGCTTCCGTGACGATATCGTGTTTTTCATCTTCCTTTACCAACGCTGGATCTACAAGGTTGATTCGAAGCGTGTGAATGAGTTTGGATTCTCGGCCGAAATGCTGCAGTCCAAGGATGAAGGAACGACACCACCGACCGCTTTGCCGGAGCCGATCGCCAGCAGTGGCGACGAACAGCCGGAAGAAGCTGCCGGTAGTCAACCTGCCTCGCCCAATGCAAAGAAAAGGAAGAACAAAAAGTCTTCCCCCAAGCGCAAGGGAGCCAATAAGACGGCCACGGATAAGAAGGACGACTAGTAACGCAATATGCAAACACACCATTAGTTACTCACATAACTAGAACGCCGCTTTGCGCCCTTTGCTTGGAGCGAACAGCCGGAAAAGCCCCACTTGGGTGTTTGTGTGTGTGTGCGCGCACAGGCAACCGGTGGCCCCATAATTGTATCTTGTATTGCGTTTATTATGCTAGTGAATTTGTTTTTCTAC]

[+] EMBL BM607194             [CCGCCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCCGCCGCTGGATGAGTACATCAAATTTCTCCCAGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACCAGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGCCCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAGGCGCTGTCGGGCGGCTCCGAGACGGACGAGGACCAGGACTCGCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCTGTTGGGCGTCACGATCGTGGTGACGCTTCTGCACAGTGTGTTCGAGCTGCTGGCATTTAAGAACGACATCCAGTTCTGGAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGTGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTTCATGGGACTCGGCATTGAGGTGTGGAAAATCCAGAAGG GGTCAATATAAACGTGACCAAGGAGAACCGTGTGCTCGGATTTCTCCCGCGCATCACCTTCACCGACAAGGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM586792             [                                                                                                                                                                                                                                                                                                        ccgCCGAGACGGACGAGGACCAGGACTCGCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCTGTTGGGCGTCACGATCGTGGTGACGCTTCTGCACAGTGTGTTCGAGCTGCTGGCATTTAAGAACGACATCCAGTTCTGGAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGTGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCAACTTTATGATTAAGATCAGCTGCTTCATGGGACTCGGCATTGAGGTGTGGAAAATCCAGAAGGTGGTCAATATAAACGTGACCAAGGAGAACCGTGTGCTCGGATTTCTCCCGCGCATCACCTTCACCGACAAGGGATCGTACGTTGAGTCGAGCACGAGGCATTACGATAATCTGGCATTTAAGTATCTCGGATGGGTGTGTTTCCCGCTGCTGGTGGCGTACAGCGTGTACAGCGTCCTGTATCAGGAGCATAAGGGATGGTATTCGTTTGTGCTGAACATGCTGTACGGATACCTGCTCACGTTTGGTTTCATCATGATGACCCCGCAGCTGTTTATCAACTACAAGCTAAAGTCGGTAGCACATCTGCCGTGGCGAATGTTGACCTACAAATTCCTCAACACCTTCATCGATGACATTTTTGCATTTGTCATCAAAATGCCGATGATGTACCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08YJB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCAACTTTTTTTTTAAGTCGGTAGCACATCTGCCGTGGCGAATGTTGACCTACAAATTCCTCAACACCTTCATCGATGACATTTTTGCATTTGTCATCAAAATGCCGATGATGTACCGAATCGGCTGCTTCCGTGACGATATCGTGTTTTTCATCTTCCTTTACCAACGCTGGATCTACAAGGTTGATTCGAAGCGTGTGAATGAGTTTGGATTCTCGGCCGAAATGCTGCAGTCCAAGGATGAAGGAACGACACCACCGACCGCTTTGCCGGAGCCGATCGCCAGCAGTGGCGACGAACAGCCGGAAGAAGCTGCCGGTAGTCAACCTGCCTCGCCCAATGCAAAGAAAAGGAAGAACAAAAAGTCTTCCCCCAAGCGCAAGGGAGCCAATAAGACGGCCACGGATAAGAAGGACGACTAGTAACGCAATATGCAAACACACCATTAGTTACTCACATAACTAGAACGCCGCTTTGCGCCCTTTGCTTGGAGCGAACAGCCGGAAAAGCCCCACTTGGGTGTTTGTGTGTGTGTGCGCGCACAGGCAACCGGTGGCCCCATAATTGTATCTTGTATTGCGTTTATTATGCTAGTGAATTTGTTTTTCTAC]


>consensus_8701#1 CCGCCTGACCATCAACCTGGTGACGGATCAAACGAACTGGGTGAAGGGTACGGTGCCGCC GCCGCTGGATGAGTACATCAAATTTCTCCCAGGCGGACAGACCTACCTGCCGATCGTGTT CTACAACGACTACTGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGT GCTGGACCTGAACCTGTCCTACCAGCCGCTATCGCTCTTCAAGTGGCAGCTGTACGCCGC CCAAGCGATGCGCAACAAATGGGCCAACAACATGTTCACGGAGGCGCTGTCGGGCGGCTC CGAGACGGACGAGGACCAGGACTCGCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCT GTTGGGCGTCACGATCGTGGTGACGCTTCTGCACAGTGTGTTCGAGCTGCTGGCATTTAA GAACGACATCCAGTTCTGGAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGT GTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCAA CTTTATGATTAAGATCAGCTGCTTCATGGGACTCGGCATTGAGGTGTGGAAAATCCAGAA GGGGTCAATATAAACGTGACCAAGGAGAACCGTGTGCTCGGATTTCTCCCGCGCATCACC TTCACCGACAAGGGATCGTACGTTGAGTCGAGCACGAGGCATTACGATAATCTGGCATTT AAGTATCTCGGATGGGTGTGTTTCCCGCTGCTGGTGGCGTACAGCGTGTACAGCGTCCTG TATCAGGAGCATAAGGGATGGTATTCGTTTGTGCTGAACATGCTGTACGGATACCTGCTC ACGTTTGGTTTCATCATGATGACCCCGCAGCTGTTTATCAACTACAAGCTAAAGTCGGTA GCACATCTGCCGTGGCGAATGTTGACCTACAAATTCCTCAACACCTTCATCGATGACATT TTTGCATTTGTCATCAAAATGCCGATGATGTACCGAATCGGCTGCTTCCGTGACGATATC GTGTTTTTCATCTTCCTTTACCAACGCTGGATCTACAAGGTTGATTCGAAGCGTGTGAAT GAGTTTGGATTCTCGGCCGAAATGCTGCAGTCCAAGGATGAAGGAACGACACCACCGACC GCTTTGCCGGAGCCGATCGCCAGCAGTGGCGACGAACAGCCGGAAGAAGCTGCCGGTAGT CAACCTGCCTCGCCCAATGCAAAGAAAAGGAAGAACAAAAAGTCTTCCCCCAAGCGCAAG GGAGCCAATAAGACGGCCACGGATAAGAAGGACGACTAGTAACGCAATATGCAAACACAC CATTAGTTACTCACATAACTAGAACGCCGCTTTGCGCCCTTTGCTTGGAGCGAACAGCCG GAAAAGCCCCACTTGGGTGTTTGTGTGTGTGTGCGCGCACAGGCAACCGGTGGCCCCATA ATTGTATCTTGTATTGCGTTTATTATGCTAGTGAATTTGTTTTTCTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8701#0      CCGCCCACGCGTCCGCCCACGCGTCCGGCGAACTTCAATTAAGGGCTTTTTTATATTTTT 60
consensus_8701#1      ----------------CCGCCTGACCATCAACCT--GGTGACGGATCAAACGAACTGGGT 42
                                      ** *  * **  * * **    * * **        *  *   *

consensus_8701#0      ATATCGGAAGCTGGCTCGATAGTTTGCCGTGATTTTCTTCCGAGACTCGTGCTCGACAAC 120
consensus_8701#1      GAAGGGTACGGTGCCGCCGCCGCTGGATGAGTACATC-----AAATTT---CTCCCAGGC 94
                        *  * * * ** * *    * * *  * *    **     * * *    ***     *

consensus_8701#0      AAGTGGCCAGAACCATTGGCCGCGTAATGAGCGAACTGTTGTCACA--GTGAATCGTTTT 178
consensus_8701#1      GGACAGACCTACCTGCCGATCGTGTTCTACAACGACTACTGGAACATGATGCGGGACTAT 154
                           * *  * *    *  ** **  *      ***  **  ***   **      * *

consensus_8701#0      CTTGCAACTAATTAAGGACTAGTAAAGTGATAAGTGAAACAACCACACAGAATGCCGAAC 238
consensus_8701#1      CAGCCGATTAATCGCACCACACCGGTGCTGGACCTGAACCTGTCCTACCAGCCGCTATCG 214
                      *   * * ****        *     *    *  **** *   *  **     **     

consensus_8701#0      GACGATAA-TGGCAACTCTACGGCAGAAAGCGAGCCTCTCGCACCTACCGACCAGGCCG- 296
consensus_8701#1      CTCTTCAAGTGGCAGCTGTACGCCG---CCCAAGCGATGCGCAACAAATGGGCCAACAAC 271
                        *   ** ***** ** **** *      * ***    **** * *  *  *   *   

consensus_8701#0      ATGCTGATGGTGTCGCCGTTCAAGGACAGCCCGGAGCACAGCTGCAGCAGCAGCAACCGT 356
consensus_8701#1      ATGTTCACGGAGGCGCTGTC---GGGCGGCTCCGAG-ACGGACG-AGGACCAGGACTCGC 326
                      *** * * ** * *** **    ** * ** * *** ** *  * ** * *** *  ** 

consensus_8701#0      CGCGCGCTGAATCGTTCTTCGCCATCACCAAGTCGCTGATCATTCGTGCATTGATTATTT 416
consensus_8701#1      TGAA---GGAAGCGCTGCTCGACACGAACCCGTACCTG------------TTGGGCGTCA 371
                       *      *** ** *  *** **  * *  **  ***            ***    *  

consensus_8701#0      ATTTCATATCATCATTCTTCCGCCGTCCCGCCCCAGACGCCGGGGTGAACCAGCAGGCCG 476
consensus_8701#1      CGATCGTGGTGACGCTTCTGCACAGTGT-GTTCGAGCTGCTGGCATTTA--AGAACGACA 428
                         ** *     *  *  * * * **   *  * **  ** **  *  *  ** * * * 

consensus_8701#0      CCGCGGGCAAGTCGAAGATAAACGCCTGGAATCTGTTCGAGAATGGCACCGTTTTCGATT 536
consensus_8701#1      TC-----CAGTTCTGGAACAACCGC----AAGTCGCTGGAGGGCCTTTCCGTTCGCTCGG 479
                       *     **  **    * ** ***    **   * * ***       *****  *    

consensus_8701#0      TGCACGTGTACATCTCCGAA--GATCAGTACGACGTGGACTTTAACAATCCAAGTAGCTT 594
consensus_8701#1      TGTTCTTCGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCA 539
                      **  * *   * *** * **  * * *    *  *  *    *      * * *   *  

consensus_8701#0      AGTTTGGCTACAGGAAGGGCTAATTTACGGCGATTGGTACGGAGGCCGCGATGGTGACGG 654
consensus_8701#1      ACTTTATGATTAAGATCAGCTGCTTCATGGGACTCGGCATTGAGG------TGTGGAAAA 593
                      * ***      * **   ***  ** * **   * ** *  ****      **  **   

consensus_8701#0      CATATTTACGCTCAATACTCAAATCAAAGCTTCCGAGCAGCTGATGAACAATGGATCGAT 714
consensus_8701#1      TCCAGAAGGGGTCAATAT---AAACGTGACCAAGGAGAACCGTGTGCTCGGATTTCTCCC 650
                         *     * ******    ** *    *    *** * *   **  *           

consensus_8701#0      ATACCTGCATACCTACGTGACGAAGACGGGCCTCAGCCCGAATCCGGCAGCCGGGGAAGA 774
consensus_8701#1      GCGCATCACCTTCACCGACAAGGGATCGTACGTTGAGTCGAGCACGAGGCATTACGATAA 710
                         * *      *  **  * *    **  * *     ***   **         **  *

consensus_8701#0      TTTCGCCGGCAAAAACATGGGCCACGCGAGAG---CAATGCTGAGCAAATACAAGCGGAT 831
consensus_8701#1      TCTGGCATTTAAGTATCTCGGATGGGTGTGTTTCCCGCTGCTGGTGGCGTACA-GCGTGT 769
                      * * **    **  *  * **    * * *     *  *****      **** ***  *

consensus_8701#0      AAAGCGCACCAAAACGCACAACTTGCTGGCGGGCGAGAAGGAAAAGTTCGAAAAAGAGCT 891
consensus_8701#1      ACAGCGTCCTGTATCAGG-AGCATAAGGGATGGT-ATTCGTTTGTGCTGAACATGCTGTA 827
                      * ****  *   * *    * * *   **  **  *   *     * *  * *    *  

consensus_8701#0      CGAAGATGCACTGGTGGACGATAAGATCCTGGCCCACTGGCATCCGAACCTGACCATCAA 951
consensus_8701#1      CGGATACCTGCTCACGTTTGGTTTCATCATGATGACCCCGCAGCTGTTTATCAACTACAA 887
                      ** * *    **   *   * *   *** **     *  *** * *    * * *  ***

consensus_8701#0      CCTGGTGACGG-ATCAAACGAACTG-GGTGAAGGGTACGGTGCCGCCGCCCCTGGATGAG 1009
consensus_8701#1      GCTAAAGTCGGTAGCACATCTGCCGTGGCGAATGTTGACCTACAA--ATTCCTCAACACC 945
                       **   * *** * ** *    * * ** *** * *    * *       ***  *    

consensus_8701#0      TACATCAAATTTCTTCCCGGCGGACAGACCTACCTGCCGATCGTGTTCTACAACGACTAC 1069
consensus_8701#1      TTCATCGATGACATTTTTGCATTTGTCATCAAAATGCCGATGATGTACCGAATCGGCTGC 1005
                      * **** *     **   *        * * *  *******  *** *   * ** ** *

consensus_8701#0      TGGAACATGATGCGGGACTATCAGCCGATTAATCGCACCACACCGGTGCTGGACCTG--A 1127
consensus_8701#1      TTC--CGTGACGA-----TATCGTGTTTTTCATCTTCCTTTACCAACGCTGGATCTACAA 1058
                      *    * *** *      ****      ** ***   *   ***   ****** **   *

consensus_8701#0      ACCTGTCCTACCAGCCGCTATCGCTCTTCAAGTGGCAGCTGTA----CGCCGCCCAAGCG 1183
consensus_8701#1      GGTTGATTCGAAGCGTGTGAATGAGTTTGGATTCTCGGCCGAAATGCTGCAGTCCAAGGA 1118
                         **           *  *  *   **  * *  * ** * *     ** * *****  

consensus_8701#0      ATGCGCAACAAATGGGCCAACAACATGTTCACGGAAGCGCTGTCGGGCGGTTCCGAGACG 1243
consensus_8701#1      TGAAGGAACGACACCACCGAC--CGCTTTGCCGGAGCCGATCGCCAGCAGTGGCGA--CG 1174
                          * *** *     ** **  *   **  ****  ** *  *  ** **  ***  **

consensus_8701#0      GACGAGGATCAGGACTCGCTGAAGGAAGCGCTGCTCGACACGAACCCGTACCTGTTGGGC 1303
consensus_8701#1      AACAGCCGGAAGAAGCTGCCGGTAGTCAACCTGCCTCGCCC-AATGCAAAGAAAAGGAAG 1233
                       **       ** *   ** *   *     ****    * * **  *  *      *   

consensus_8701#0      GTCACGATTGTGGTGACGCTTCTGCACAGT-GTGTTCGAGCTGCTGGCATTTAAGAACGA 1362
consensus_8701#1      AACA-AAAAGTCTTCCCCCAAGCGCAAGGGAGCCAATAAGACGGCCACGGATAAGAAGGA 1292
                        **  *  **  *  * *    ***  *  *      **  *    *   ****** **

consensus_8701#0      CATCCAGTTCTGGAACAACCGCAAGTCGCTGGAGGGCCTTTCCGTTCGCTCGGTGTTCTT 1422
consensus_8701#1      CGACTAGTAACGCAATATGCA-AACACACCATTAGTTACTCACATAACTAGAACGCCGCT 1351
                      *  * ***   * ** *  *  **  * *     *    *  * *         *    *

consensus_8701#0      CGGCGTCTTCCAATCGCTGATCGTGCTGCTGTACGTGCTGGACAATGAGACCAACTTTAT 1482
consensus_8701#1      TTGCGCCCTTTGCTTG--GAGCGAACAGCCGGAAAAGCCCCACT-TGGGTGTTTGTGTGT 1408
                        *** * *    * *  ** **  * ** * *   **   **  ** *      * * *

consensus_8701#0      GATTAAGATCAGCTGCTTCATGGGACCCGATCCAGCTGTAACCAATAATATGAAAGCTTT 1542
consensus_8701#1      GTGTGCGCGCACAGGCAACCGGTGGCCCCAT--AATTGTATCTTGTATTGCGTTTATTAT 1466
                      *  *  *  **   **  *  * * *** **  *  **** *   ** *  *     * *

consensus_8701#0      ACTAGGTTCATTCGTTTCTCAAAAAGACTACGTTTAGCAGTAATAGTGGTGCCGGACGGA 1602
consensus_8701#1      GCTAG-TGAATTTGTTTTTCTAC------------------------------------- 1488
                       **** *  *** **** ** *                                      

consensus_8701#0      AGAAAAAAACGAAATGAGCTGTGGTATGTTTTACATGATGCAAGTACATGTTAGTGTAGT 1662
consensus_8701#1      ------------------------------------------------------------
                                                                                  

consensus_8701#0      ATGATAACTGATGAAAGTGTGAGTTTCAACACCGAACAAAGGGATAACGGTTAAAAAAAA 1722
consensus_8701#1      ------------------------------------------------------------
                                                                                  

consensus_8701#0      AAAAA 1727
consensus_8701#1      -----
                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)