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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8710#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1161 fasta sequence
[TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA]
[+] EMBL CNS08FBK [TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAG ]
[+] EMBL BX619891 [ TCCGACCTTNAC TTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTG CAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA ]
[+] EMBL BX467736 [ ccagaaTCGGCACG AGGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTT TAGGGAAAACCTGGGGATGACA GGGTTCAGTTTGTAACGCATAAG CTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA]
consensusID : consensus_8710#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1132 fasta sequence
[CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT]
[+] EMBL BM642592 [CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCC ]
[+] EMBL BM651004 [ ccgGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCAC CAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTC ]
[+] EMBL BM602780 [ ccGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCC GGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGG AACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT]
consensusID : consensus_8710#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 830 fasta sequence
[GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA]
[+] EMBL AL697302 [GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA]
consensusID : consensus_8710#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence
[CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA]
[+] EMBL AL933133 [CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA]
consensusID : consensus_8710#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence
[GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA]
[+] EMBL BX468740 [GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA]
consensusID : consensus_8710#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence
[GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT]
[+] EMBL AL696713 [GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT]
consensusID : consensus_8710#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence
[GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT]
[+] EMBL BX468162 [GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8710#0 TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGAC 60
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 ------------------------------------------------------------
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 GCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCA 120
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 ------------------------------------------------------------
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 ACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCC 180
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 ---------------------------CGGCGAAATTGGAGCTGACACTGCACAACCTGA 33
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 TCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCC 240
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 TGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGG 93
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 CCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCA 300
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 AGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAG 153
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 TCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCG 360
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 CCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCG 213
consensus_8710#2 ------------------------------------------------------------
consensus_8710#0 TACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCA 420
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 ---------------------------------------------------GAGGCAGAA 9
consensus_8710#3 ------------------------------------------------------------
consensus_8710#1 TTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAA 273
consensus_8710#2 ------------------------------------------------------GAATTG 6
consensus_8710#0 GCAGCAGCAACAGCAACATCAACAGCAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 479
consensus_8710#5 ------GCTCGAGCAG-ATCGGCCG-AGGAGTTNA-CCATGCCCGATTC-TCCGACCTTT 50
consensus_8710#4 ------------------------------------------------------------
consensus_8710#6 TTCGGCACGATGGACACATCAACAACAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 68
consensus_8710#3 ------------CGCCCGAGGTTAACGTTGCTAGT-CCTTCGGAACGTTCGGATGTCTTT 47
consensus_8710#1 TCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTG 333
consensus_8710#2 CCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGC-TACTGCAGCGGTGTACGTCTCTAT 65
consensus_8710#0 ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 532
consensus_8710#5 ACTTTACGCCAANGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 103
consensus_8710#4 -------------------GCAGAA------TTCGGCACGAGGTCG---GAGTATTCGTC 32
consensus_8710#6 ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 121
consensus_8710#3 TACAGACTTCCTACTGTCCTTAGTG------TTTAGTGGAAAACCTGGCGGATGACAGGC 101
consensus_8710#1 AGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACA 393
consensus_8710#2 CTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACC 125
*
consensus_8710#0 GAC--TACAACAAGG-ACAAGAAGTAAACCGTGCCAACCG-TTGCTAGTCCTTCGGAA-C 587
consensus_8710#5 GAC--TACAACAAGG-ACAAGAAGTAAACCGTGC-AACCG-TTGCTAGTCCTTCGGAA-C 157
consensus_8710#4 GAC--TACAACAAGGCACAAGAAGTAAACC-GTGCAACCG-TTGCTAGTCCTTCGGAA-C 87
consensus_8710#6 GAC--TACAACAAGGGACAAGAAGTAAACCTGTGCAACCG-TTGCTAGTCCTTCGGAA-C 177
consensus_8710#3 GTT--CAGTTTGTAACGCATAAGCTGAACGCGGGCA--CG-TGACTGGTGGT-CACAA-T 154
consensus_8710#1 GTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAA-GTCGCAGTACTACGAGATC 452
consensus_8710#2 ATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTG 185
* ** * *
consensus_8710#0 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTTATAGGGAAAA-CC-TG 640
consensus_8710#5 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTT-TAGGGAAAA-CC-TG 209
consensus_8710#4 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-G-TGTTTAGGGAAAAACC-TG 140
consensus_8710#6 GTTCGGATG--TCTTTTCAGACTTTCTTCTGGTCCTTA-GGTGTTTAGGGAAAA-CC-TG 232
consensus_8710#3 GC-CGTNAA--CCACTCAACCATTCCAAAACGTGCAAA-G-GATATANAACAAAAAC-AA 208
consensus_8710#1 GATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCT-TA 511
consensus_8710#2 GAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATA 245
* * * * *
consensus_8710#0 G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGNCTGAACGCG 683
consensus_8710#5 G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGC-TGAACGCG 251
consensus_8710#4 G------GGATGACCA--------AGGGGGGTA---TCAAGGTTTGTAACG---GCAATA 180
consensus_8710#6 G------GG--GGATG--------ACAGGGGT----TCAGGTTTTGTAACC---GCCATA 269
consensus_8710#3 G------AAGTAAATACGTCCTC-AGACATGTCTCCTCAGAATGGGNGAAT---GCAGCA 258
consensus_8710#1 CCCACCCGGACAACCACGCCACG-GATACGATCGTACCGGAGACCGTTCTTCGTACGCTG 570
consensus_8710#2 GCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCA 305
*
consensus_8710#0 GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA-G 741
consensus_8710#5 GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAAC-ATTCCAAAACGTGCAANAG 309
consensus_8710#4 AAGGCTTGAAA-CGCGG-GGCACGGTTGACTTGGTTG-GTTCAACCAAATTGCCGGTTAC 237
consensus_8710#6 A--GCTTGAA--CGCGG-GCCACCGT-GACCTTGGTG-GTC--ACCACAATGCCGTTTAC 320
consensus_8710#3 GCGCAATGCA--AACGG-CGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCC 315
consensus_8710#1 ACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGC 630
consensus_8710#2 TCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGT 365
consensus_8710#0 GA-TATAAAAAAAAACAAGAAGTAAA-TACTCCTCA--GACATGTCTCCTCAGAATGGGG 797
consensus_8710#5 GA-TATAAAAAAAAACAAGAAGTAANATACTCCTCA--GACATGTCTCCTCAGAATGGGG 366
consensus_8710#4 CA--GCTTCAA-GCCATTTCCAAAAACCGGTTGGCA--AAAGGGATTATTAACAACCAGA 292
consensus_8710#6 CA--ACGTCAAAGCCATTTCCCAAAAACG-TTGCCA--CAGGA---TATTCACAACAAAC 372
consensus_8710#3 CACTATATCTATATAANCNTAGTAAATCAGTTGTCC--CAATTATTCGTAAANCACCACC 373
consensus_8710#1 AGCAGCGACATCATCAAGAGATGCAATCACGTCCCA--CCGGCGACTACT-ACACGCAGG 687
consensus_8710#2 ACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTA 425
consensus_8710#0 AATGA-GCA--GCGCAATGAAACGGCG-----CACATTCAACCCACTGTATATAATATGT 849
consensus_8710#5 ACTGA-GCAT-GCGCAATGAAACGGCG-----CACATTCAAACCACTGTATATAATATGT 419
consensus_8710#4 GAAANCACAG-AAGGTTAGANTTAGCT-----TCCTTACAAGGAAACCAATTAGTTCTTC 346
consensus_8710#6 ACCAACGCAC-A-GTTCAAAATTACTT-----CCCTTC-----AGACCA-----TTGTTC 415
consensus_8710#3 ATCGACACGTTACGTACACGTCCAAGG-----CACTTTGGTGTNTGCCGGT--ATGGTGC 426
consensus_8710#1 ATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGC 747
consensus_8710#2 ACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACC 485
consensus_8710#0 --TTTTACCCATTTCTTTTT-TGTTTCATTTCCA--TTT----TTAAACCCCCTCACACT 900
consensus_8710#5 ATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTT----TTAAACCCCCTCACACT 475
consensus_8710#4 CCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGG--CCAAAAATGCAAAAACC 404
consensus_8710#6 TCCCTCAGAAAAT----GGGGAAATT-ANCCACAGCGNC-------AAATTGNGAAAACC 463
consensus_8710#3 TAGNNAATTAAAC--AGAANAAGATTCAATGAANGNGTTAT--ATAATAGAAANAGANCN 482
consensus_8710#1 AGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAA--CAACATCAACAACAACA 805
consensus_8710#2 GTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACC 545
* *
consensus_8710#0 ---ACTCCTCCAGCATTGTTTGCGTTGT------TTTTAAT-------AAAGAAAAATTA 944
consensus_8710#5 ---AATCCTCCAGCATTGTATGCGTAGTA---TCNTTCAACTAACACGGAACAANACTTA 529
consensus_8710#4 ---GGGNGCTCGGCCAANCAATTTTCAAA---GCACCCANA-CATTGTTAATTAATTCAA 457
consensus_8710#6 ---GGGG---CGNCCACACA--TTTCNAA---G-ACCCAAC-TT---------------- 494
consensus_8710#3 ---GCATACTNGGTATGGTTA--GTAAAN---ATGTGGACT-AACGNAAAAGGAAAACAG 533
consensus_8710#1 ---GCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTC 862
consensus_8710#2 AATGGCANCCAAGCCATGCAGGCCTAGGCC--AAGNCTAGGCTAGAATTGTCGACGCAAG 603
consensus_8710#0 TGAGTTTTATTTTGCG---ATTGTGTGTAAAGGACAGAAG-ACGACGCTGCCATGCTGCA 1000
consensus_8710#5 TGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGC-ATGCT--- 585
consensus_8710#4 GTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTAT---ACACAG 514
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 GAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCC---CAGCAA 590
consensus_8710#1 CGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAA-CCGTGCAA 921
consensus_8710#2 CCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCC-AAGCACCC 662
consensus_8710#0 AATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGT 1060
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 GGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTT 574
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 AATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCT-CNTGCAAGT 649
consensus_8710#1 CCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGT 981
consensus_8710#2 GGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGC 722
consensus_8710#0 TCGTTTTAAGCCTGAGGTCTGG-TTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTA 1119
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 TCAT---AANCAAAGAGATTAC-GATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATG 630
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 TGGC---CACCAAGGAGTGTAT-TACATTTACTCCGTACTACGTATGCTCGN-GCTCCTA 704
consensus_8710#1 TTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCA 1041
consensus_8710#2 TTGC---GGCCGAAAAGGGTTC-CAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAG 778
consensus_8710#0 GAGAT-ACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA----------------- 1161
consensus_8710#5 ------------------------------------------------------------
consensus_8710#4 GANAT-ATATNATAGACACAGTTATTACAGTATATCAGATTAA----------------- 672
consensus_8710#6 ------------------------------------------------------------
consensus_8710#3 GGGGT-ATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA--------------- 748
consensus_8710#1 CGTGA-CTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATAT 1100
consensus_8710#2 NACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA-------- 830
consensus_8710#0 --------------------------------
consensus_8710#5 --------------------------------
consensus_8710#4 --------------------------------
consensus_8710#6 --------------------------------
consensus_8710#3 --------------------------------
consensus_8710#1 AAAAAAACAACAACTAAATACTCCTCAGACAT 1132
consensus_8710#2 --------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||