cluster # 8747

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Anopheles gambiae
cluster # 8747 cluster # 8747 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8747#0 length = 1951 sequences # 9
consensus_8747#1 length = 669 sequences # 1

consensus_8747#2 length = 572 sequences # 1
consensus_8747#3 length = 365 sequences # 1

consensusID : consensus_8747#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1951
fasta sequence

                              [AGCTCTTGATATTGGAAGGAAAATTTCTGTGGCTTGCACGACCAGGAAAAGCGAACGAAACAAATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGGTGGAAAAATCATAGGGACTTTGTGAACAGCAGAAAAGCTATCCGAGCAACGTTGAATCGAACGATTTTTGCATTGCATAGTGGGAGAAAGATGATGCATGTGTTGGTGTGAGACGTACTCGACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAG-GACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAACCGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGT----TTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAGCTAGAACTGGAACTGCTACTGTCGACGGTCGCACTGCGATCCCGGGTGCTAAAGGCAGAGCTGGAAACGATTGACAAAGCTGACGAACGCCGGGAACGCAAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGAAGCAAAAGCTGCGCGAAAGTGCCGGAAAGCTAATCGGGCATCAAATCAAAATGTCCAAAATGAAACACTCATCTTCGCTTGTCCCACCTTCCCCGGCGCCGTCGCAAAATACGGATGATAGTATGGATGCGGTTCCATTTTTGCCACAAAATCATCATTTGCAACATTTGAGCAGCGATAGTACGAAACCGATCGTGCCCAAAAACGATACTCCCAACAAATTTTGGCTCTCAGTCGAGCCGTACTGTATGCCGATCTCTCACGAAGATCTGAAACTGTTGGACGATCTGTTGGAAGAGTATTCGGGCCCACTGATTCCTCCGATACCTGAGCTGGGACCGCACTACAGCACTCAGTGGGCGGCGGATGACATAAAAGAGGAACAGGATGGTGTTGCAAACTCAGCTAGCTCCAAATCCAAATCAAAGCCCCTAACCAATGGCGACGTTAGTAAAAAAGAAAAGTTAATGGGTGAGGGTATCACTGGCCCTCTGACACAAAGACTGGTGTCGGCGCTGATGGANGAGAACCTGAATCCCGACTGTAGCAGCAACGAGAACAGCAATAGTAGCTCCGATGTTACCCATAGCAATAATGCTCGCAGTGCCGT-GGCATTGCTG-AAAA--TGGTATCAGTATCGAGCGGANGGTTCGCAAGGAGCTAATCGAGCAGGGCATCCTTGACGCGGACGATATGCCGAAAAGTCAGCAGGACGATGAAATCCTATCAGAAATCAACCGCGTTCGCACAGAGCTGGCGGTAATAGCCGAGTACAATTCGAACGAAATACGTAAACTACAATCGATGGCAAAGGATGAAATGAAACGCATCGAAGTCAAGCGTAAGCTGGACCGAGTAGATCAGGAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACACGTTTAAAAGGTTAAAAAA]

[+] EMBL CNS09LCI             [AGCTCTTGATATTGGAAGGAAAATTTCTGTGGCTTGCACGACCAGGAAAAGCGAACGAAACAAATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGGTGGAAAAATCATAGGGACTTTGTGAACAGCAGAAAAGCTATCCGGGCAACGTTGAATCGAACGATTTTTGCATTGCATAGTGGGAGAAAGATGATGCATGTGTTGGTGTGAGACGTACTCGACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAG GACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAA CGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTCTGGTTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAGCTAGAACTGGAACTGCTACTGTCGACGGTCGCACTGCGATCCCGGGTGCTAAAGGCAGAGCTGGAAACGATTGACAAAGCTGACGAACGCCGGGAACGCAAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGAAGCAAAAGCTGCGCGAAAGTGCCGGAAAGCTAATCGGGCATCAAATCAAAATGTCCAAAATGAAACACTCATCTTCGCTTGTCCCACCTTCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX601776             [                                                    GAACGAAACAAATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGGTGGAAAAATCATAGGGACTTTGTGAACAGCAGAAAAGCTATCCGAGCAACGTTGAATCGAACGATTTTTGCATTGCATAGTGGGAGAAATATGATGCATGTGTTGGTGTGAGACGTACTCGACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAG GACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX625536             [                                                               ATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGGTGGAAAAATCGTAGGGACTTTGTGAACAGCAGAAAAGCTATCCGAGCAACGTTGAATCGAACGATTTTTGCATTGCATAGTGGGAGAAAGATGATGCATGTGTTGGTGTGAGACGTACTCGACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACAGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAG GACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAACCGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGT    TTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAGCTAGAACTGGAACTGCTACTGTCGACGGTCGCACTGCGATCCCGGGTGCTGAAGGCAGAGCTGGAAACGATTGACAAAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09E36             [                                                                                                                                                                                                                                                                       ttTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAGAGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAACCGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGT    TTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09GGW             [                                                                                                                                                                                                                                                                                     GTTTGGGAA AGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACACTAAAGCCATGGCAGATAAAG GACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAACCGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGT    TTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAGCTAGAACTGGAACTGCTACTGTCGACGGTCGCACTGCGATCCCGGGTGCTAAAGGCAGAGCTGGAAACGATTGACAAAGCTGACGAACGCCGGGAACGCAAAGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX622475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGACGGTCGCACTGCGATCCCGGGTGCTGAAGGCAGAGCTGGAAACGATTGACAAAGCTGACGAACGCCGGGAACGCAAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGAAGCAAAAGCTGCGCGAAAGTGCCGGAAAGCTAATTGGGCATCAAATCAAAATGTCCAAAATGAAACACTCATCTTCGCTTGTCCCACCTTCCCCGGCGCCGTCGCAAAATACGGATGATAGTATGGATGCGGTTCCATTTTTGCCACAAAATCATCATTTGCAACATTTGAGCAGCGATAGTACGAAACCGATCGTGCCCAAAAACGATACTCCCAACAAATTTTGGCTCTCAGTCGAGCCGTACTGTATGCCGATCTCTCACGAAGATCTGAAACTGTTGGACGATCTGTTGGAAGAGTATTCGGGCCCACTGATTCCTCCGATACCTGAGCTGGGACCGCACTACAGCACTCAGTGGGCGGCGGATGACATAAAAGAGGAACAGGATGGTGTTGCAAACTCAGCTAGCTCCAAATCCAAATCAAAGCCCCTAACCAATGGCGACGTTAGTAAAAAAGAAAAGTTAATGGGTGAGGGTATCACTGGCCCTCTGACACAAAGACTGGTGTCGGCGCTGATGGANGAGAACCTGAATCCCGACTGTAGCAGCAACGAGAACAGCAATAGTAGCTCCGATGTTACCCATAGCAATAATGCTCGCAGTGCCGT GGCATTGCTG AAAA  TGGTATCAGTATCGAGCGGANGCTTCGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09LCJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTGCCCAAAAACGATACTCCCAACAAATTTTGGCTCTCAGTCGAGCCGTACTGTATGCCGATCTCTCACGAAGATCTGAAACTGTTGGACGATCTGTTGGAAGAGTATTCGGGCCCACTGATTCCTCCGATACCTGAGCTGGGACCGCACTACAGCACTCAGTGGGCGGCGGATGACATAAAAGGGGAACAGGATGGTGTTGCAAACTCAGCTAGCTCCAAATCCAAATCAAAGCCCCTAACCAATGGCGACGTTAGTAAAAAAGAAAAGTTAATGGGTGAGGGTATCACTGGCCCTCTGACACAAAGACTGGTGTCGGCGCTGATGGAGGAGAACCTGAATCCCGACTGTAGCAGCAACGAGAACAGCAATAGTAGCTCCGATGTTACCCATAGCAATAATGCTCGCAGTGCCGTGGGCATTGCTGAAAAA  TGGTATCAGTATCGAGCGGA GGTTCGCAAGGAGCTAATCGAGCAGGGCATCCTTGACGCGGACGATATGCCGAAAAGTCAGCAGGACGATGAAATCCTATCAGAAATCAACCGCGTTCGCACAGAGCTGGCGGTAATAGCCGAGTACAATTCGAACGAAATACGTAAACTACAATCGATGGCAAAGGATGAAATGAAACGCATCGAAGTCAAGCGTAAGCTGGACCGAGTAGATCAGGAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACACGTTTAAAAGGTTAAAAAA]
[-] EMBL CNS09GGX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAATGCTCGCAGTGCCGT GGCATTGCTG AAAAATTGGTATCAGTATCGAGCGGAGGGTTCGCAAGGAGCTAATCGAGCAGGGCATCCTTGACGCGGACGATATGCCGAAAAGTCAGCAGGACGATGAAATCCTATCAGAAATCAACCGCGTTCGCACAGAGCTGGCGGTAATAGCCGAGTACAATTCGAACGAAATACGTAAACTACAATCGATGGCAAAGGATGAAATGAAACGCATCGAAGTCAAGCGTAAGCTGGACCGAGTAGATCAGGAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTG GCAACAAAGATGTATTCGGTATGATCAATATA                        ]
[-] EMBL CNS09E37             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aAAATCCTATCAGAAATAAACCGCGTTCGCACAGAGCTGGCGGTAATAGCCGAGTACAATTCGAACGAAATACGTAAACTACAATCGATGGCAAAGGATGAAATGAAACGCATCGAAGTCAAGCGTAAGCTGGACCGAGTAGATCAGGAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACAAAAAAAAATGGTTAta   ]




>consensus_8747#0
AGCTCTTGATATTGGAAGGAAAATTTCTGTGGCTTGCACGACCAGGAAAAGCGAACGAAA
CAAATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGG
TGGAAAAATCATAGGGACTTTGTGAACAGCAGAAAAGCTATCCGAGCAACGTTGAATCGA
ACGATTTTTGCATTGCATAGTGGGAGAAAGATGATGCATGTGTTGGTGTGAGACGTACTC
GACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGGGAACAGCTATAGAGTAT
TTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACTGTGTTCGTACTATTAGCACAC
TAAAGCCATGGCAGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGG
TAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGT
CGGTCCTGGATGTAGCAAACTGCCTCCGGTGAAACCGTCACCAGTAGCCAGTATTCCATC
TCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAA
GGTTTTGCCGAAATATACTGCAGCGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGA
AGATTTGGACACAATTCAGCTAGAACTGGAACTGCTACTGTCGACGGTCGCACTGCGATC
CCGGGTGCTAAAGGCAGAGCTGGAAACGATTGACAAAGCTGACGAACGCCGGGAACGCAA
AGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGAA
GCAAAAGCTGCGCGAAAGTGCCGGAAAGCTAATCGGGCATCAAATCAAAATGTCCAAAAT
GAAACACTCATCTTCGCTTGTCCCACCTTCCCCGGCGCCGTCGCAAAATACGGATGATAG
TATGGATGCGGTTCCATTTTTGCCACAAAATCATCATTTGCAACATTTGAGCAGCGATAG
TACGAAACCGATCGTGCCCAAAAACGATACTCCCAACAAATTTTGGCTCTCAGTCGAGCC
GTACTGTATGCCGATCTCTCACGAAGATCTGAAACTGTTGGACGATCTGTTGGAAGAGTA
TTCGGGCCCACTGATTCCTCCGATACCTGAGCTGGGACCGCACTACAGCACTCAGTGGGC
GGCGGATGACATAAAAGAGGAACAGGATGGTGTTGCAAACTCAGCTAGCTCCAAATCCAA
ATCAAAGCCCCTAACCAATGGCGACGTTAGTAAAAAAGAAAAGTTAATGGGTGAGGGTAT
CACTGGCCCTCTGACACAAAGACTGGTGTCGGCGCTGATGGANGAGAACCTGAATCCCGA
CTGTAGCAGCAACGAGAACAGCAATAGTAGCTCCGATGTTACCCATAGCAATAATGCTCG
CAGTGCCGTGGCATTGCTGAAAATGGTATCAGTATCGAGCGGANGGTTCGCAAGGAGCTA
ATCGAGCAGGGCATCCTTGACGCGGACGATATGCCGAAAAGTCAGCAGGACGATGAAATC
CTATCAGAAATCAACCGCGTTCGCACAGAGCTGGCGGTAATAGCCGAGTACAATTCGAAC
GAAATACGTAAACTACAATCGATGGCAAAGGATGAAATGAAACGCATCGAAGTCAAGCGT
AAGCTGGACCGAGTAGATCAGGAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGA
CTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAG
CAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCT
ACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGAT
CAATATAGAACACGTTTAAAAGGTTAAAAAA

consensusID : consensus_8747#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [CCGCCCATTTCAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACACGTTTAAATGGTTATATTTAACATGGTGTTCCTACTTAATTTACTTTATTTTAATAACTATGTGGCACTGGTTTCATATTTCCATGAATGAGGTGTTTCCGTTATGTTAGTTATTTTTGTCATACGAAGTATCACTGTTGTTCCAATATCTCTGCTGTTCGGGTTTGTTTCTGAACAGAATGATATTATCTACCAGCAACAATGCCTTTAATTTTGTACTGTTACAAGGAAACAGAAAAAATAATTAAATTAAGATTTTGTGATAATTAATTCAGCTATTTTCTTTCACACATACCCTCATTTTTGCCTGGAGTCATTTTTTCACAATTTTTGAGCTCATTTCATTCGTATAGCTTCAGATGGTGAAAGTAATAAAAGGACCATCATCCTATTTCTAAGGATTTTTTTTTCAATTTGACAGGGTCCTA]

[+] EMBL BM627824             [CCGCCCATTTCAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACACGTTTAAATGGTTATATTTAACATGGTGTTCCTACTTAATTTACTTTATTTTAATAACTATGTGGCACTGGTTTCATATTTCCATGAATGAGGTGTTTCCGTTATGTTAGTTATTTTTGTCATACGAAGTATCACTGTTGTTCCAATATCTCTGCTGTTCGGGTTTGTTTCTGAACAGAATGATATTATCTACCAGCAACAATGCCTTTAATTTTGTACTGTTACAAGGAAACAGAAAAAATAATTAAATTAAGATTTTGTGATAATTAATTCAGCTATTTTCTTTCACACATACCCTCATTTTTGCCTGGAGTCATTTTTTCACAATTTTTGAGCTCATTTCATTCGTATAGCTTCAGATGGTGAAAGTAATAAAAGGACCATCATCCTATTTCTAAGGATTTTTTTTTCAATTTGACAGGGTCCTA]




>consensus_8747#1
CCGCCCATTTCAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCG
TCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCT
TTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATA
TGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGAAC
ACGTTTAAATGGTTATATTTAACATGGTGTTCCTACTTAATTTACTTTATTTTAATAACT
ATGTGGCACTGGTTTCATATTTCCATGAATGAGGTGTTTCCGTTATGTTAGTTATTTTTG
TCATACGAAGTATCACTGTTGTTCCAATATCTCTGCTGTTCGGGTTTGTTTCTGAACAGA
ATGATATTATCTACCAGCAACAATGCCTTTAATTTTGTACTGTTACAAGGAAACAGAAAA
AATAATTAAATTAAGATTTTGTGATAATTAATTCAGCTATTTTCTTTCACACATACCCTC
ATTTTTGCCTGGAGTCATTTTTTCACAATTTTTGAGCTCATTTCATTCGTATAGCTTCAG
ATGGTGAAAGTAATAAAAGGACCATCATCCTATTTCTAAGGATTTTTTTTTCAATTTGAC
AGGGTCCTA

consensusID : consensus_8747#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [CCGCCCACGCGTCCGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACGAATTAAACAGTGTTCGTACTATTACCACACTAAAGCCATGGTGGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGTATGTACCAAACTGCCTCCGGTGAAACCGTCACCAGTATCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATACTGCAACGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAACTAGAACTGGAACTGCTACTGTCGACAGTCGCACTGCTATCCCGGGAGCTAAAGGCAGATCTGGAAACTATTGACAAAGCTGACCAACGCCGGGAACGCTAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGA]

[+] EMBL BM594894             [CCGCCCACGCGTCCGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACGAATTAAACAGTGTTCGTACTATTACCACACTAAAGCCATGGTGGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGTATGTACCAAACTGCCTCCGGTGAAACCGTCACCAGTATCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATACTGCAACGCTGGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAACTAGAACTGGAACTGCTACTGTCGACAGTCGCACTGCTATCCCGGGAGCTAAAGGCAGATCTGGAAACTATTGACAAAGCTGACCAACGCCGGGAACGCTAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTCCCGGCAAGCGGAAACGCTTGGAGGAGA]




>consensus_8747#2
CCGCCCACGCGTCCGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAA
ACGAATTAAACAGTGTTCGTACTATTACCACACTAAAGCCATGGTGGATAAAGGACTGTT
GAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTAC
CGGTTCGTCGGCTGTCCCCGGCACTGCCGGTGTCGGTCCTGTATGTACCAAACTGCCTCC
GGTGAAACCGTCACCAGTATCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCT
GTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATACTGCAACGCT
GGCAAATACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAACTAGAACT
GGAACTGCTACTGTCGACAGTCGCACTGCTATCCCGGGAGCTAAAGGCAGATCTGGAAAC
TATTGACAAAGCTGACCAACGCCGGGAACGCTAAGGAAAGCATTTGGAGCGAGCCCCTTC
TTCTCCCGGCAAGCGGAAACGCTTGGAGGAGA

consensusID : consensus_8747#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 365
fasta sequence

                              [CAGAATCCGCGCCGCAGGTTTAGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACAGTGTTCGTACTATTAGCACAATAAAGCCATGGCAGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCGGTGTCGGTCCTGGATGTAGCAAACTGCTCCGGTGAAACGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATACTGCAG]

[+] EMBL AL697164             [CAGAATCCGCGCCGCAGGTTTAGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTGAAAACTTGGAAAACAAATTAAACAGTGTTCGTACTATTAGCACAATAAAGCCATGGCAGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCGGTGTCGGTCCTGGATGTAGCAAACTGCTCCGGTGAAACGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATACTGCAG]




>consensus_8747#3
CAGAATCCGCGCCGCAGGTTTAGTTTGGGAACAGCTATAGAGTATTTGGTGTTTTGGTTG
AAAACTTGGAAAACAAATTAAACAGTGTTCGTACTATTAGCACAATAAAGCCATGGCAGA
TAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAAAGAGCCGGGGTAGTTTCCCTTCCGG
TAGTGCCCCTACCGGTTCGTCGGCTGTCCCCGGCACTGCGGTGTCGGTCCTGGATGTAGC
AAACTGCTCCGGTGAAACGTCACCAGTAGCCAGTATTCCATCTCCCGGTTCCCCGGATCA
CTCAGTGCTGTTTCCACACATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAATATAC
TGCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      AGCTCTTGATATTGGAAGGAAAATTTCTGTGGCTTGCACGACCAGGAAAAGCGAACGAAA 60
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CAAATTCATGCAATCTGTGTTAATCAAACATTATTCTTTACTGTAACTTCGTATGTGAGG 120
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TGGAAAAATCATAGGGACTTTGTGAACAGCAGAAAAGCTATCCGAGCAACGTTGAATCGA 180
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      ACGATTTTTGCATTGCATAGTGGGAGAAAGATGATGCATGTGTTGGTGTGAGACGTACTC 240
consensus_8747#1      --CCGCCCATTTCAGATAATGGACACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGT 58
                                                                                  

consensus_8747#2      --------------------------CCGCCCACGC-GTCCGG--GAACAGCTATAGAGT 31
consensus_8747#3      ---------------CAGAATCCGCGCCGCAGGTTTAGTTTGG--GAACAGCTATAGAGT 43
consensus_8747#0      GACATCCAAGCCCTTCAAAAGAGTGTTAGTGAGTGTTGTTTGG--GAACAGCTATAGAGT 298
consensus_8747#1      CGTCCACTGACCAAACAAGAACGAGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGT 118
                                                           *   *   **  *** * ** **

consensus_8747#2      ATTTGGTGT---TTTGGTTGAAAACTTG---GAAAACGAATTAAACAGTGTTCGTACTAT 85
consensus_8747#3      ATTTGGTGT---TTTGGTTGAAAACTTG---GAAAACAAATTAAACAGTGTTCGTACTAT 97
consensus_8747#0      ATTTGGTGT---TTTGGTTGAAAACTTG---GAAAACAAATTAAACTGTGTTCGTACTAT 352
consensus_8747#1      CTTTCGGATCAGTTGGAGCTAATGCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAA 178
                       *** *  *   ** *    **  * **        *   **  *     * *  **** 

consensus_8747#2      TACCACACTAAA--GCCATGGTGGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAA 143
consensus_8747#3      TAGCACAATAAA--GCCATGGCAGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAA 155
consensus_8747#0      TAGCACACTAAA--GCCATGGCAGATAAAGGACTGTTGAAGCGTATTTCGCTATCTTCAA 410
consensus_8747#1      TATGCCGTTAAACTGCGATTTCGTGAGCAACAAAGATGTATTCGGTATGATCAATATAGA 238
                      **   *  ****  ** **         *  *  * ** *     * *    *   *  *

consensus_8747#2      AGA-GCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACC-GGTTCGTCGGCTGTCCCCGG 201
consensus_8747#3      AGA-GCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACC-GGTTCGTCGGCTGTCCCCGG 213
consensus_8747#0      AGA-GCCGGGGTAGTTTCCCTTCCGGTAGTGCCCCTACC-GGTTCGTCGGCTGTCCCCGG 468
consensus_8747#1      ACACGTTTAAATGGTTATATTTAACATGGTGTTCCTACTTAATTTACTTTATTTTAATAA 298
                      * * *      * ***    **    * ***  *****    **       * *      

consensus_8747#2      CACTGCCGGTGTCGGTCCTGTATGT-----ACCAAACTGCCTCCGGTGAAACCGTCACCA 256
consensus_8747#3      CACTGC-GGTGTCGGTCCTGGATGT-----AGCAAACTGC-TCCGGTGAAAC-GTCACCA 265
consensus_8747#0      CACTGCCGGTGTCGGTCCTGGATGT-----AGCAAACTGCCTCCGGTGAAACCGTCACCA 523
consensus_8747#1      CTATGT-GGCACTGGTTTCATATTTCCATGAATGAGGTGTTTCCGTTATGTTAGTTATTT 357
                      *  **  **    ***     ** *     *   *  **  **** *      ** *   

consensus_8747#2      GTATCC-----AGTATT-CCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACAC 310
consensus_8747#3      GTAGCC-----AGTATT-CCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACAC 319
consensus_8747#0      GTAGCC-----AGTATT-CCATCTCCCGGTTCCCCGGATCACTCAGTGCTGTTTCCACAC 577
consensus_8747#1      TTGTCATACGAAGTATCACTGTTGTTCCAATATCTCTGCTGTTCGGGTTTGTTTCTGAAC 417
                       *  *      *****  *  *    *   *  *        ** *   ******   **

consensus_8747#2      ATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAAT--ATACTGCAACGCTGG--CAAA 366
consensus_8747#3      ATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAAT--ATACTGCAG------------ 365
consensus_8747#0      ATCAAAACATCGGACAACTTAAAGGTTTTGCCGAAAT--ATACTGCAGCGCTGG--CAAA 633
consensus_8747#1      AGAATGATATTATCTACCAGCAACAATGCCTTTAATTTTGTACTGTTACAAGGAAACAGA 477
                      *  *  * **     * *   **   *      ** *   *****               

consensus_8747#2      TACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAACTAGAACTGGAACT 426
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TACGACGGAAGAGTTGATACCGGCAGAAGATTTGGACACAATTCAGCTAGAACTGGAACT 693
consensus_8747#1      AAAAATAATTAAATTAAGATTTTGTGATAATTAATTCAGCTATTTTCTTTCACACATACC 537
                                                                                  

consensus_8747#2      GCTACTGTCGACAGTCGCACTGCTATCCCGGGAGCTAAAGGCAGATCTGGAAACTATTGA 486
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      GCTACTGTCGACGGTCGCACTGCGATCCCGGGTGCTAAAGGCAGAGCTGGAAACGATTGA 753
consensus_8747#1      CTCATTTTTGCCTG--GAGTCATTTTTTCACAATTTTTGAGCTCATTTCATTCGTATAGC 595
                                                                                  

consensus_8747#2      CAAAGCTGACCAACGCCG-GGAACGCTAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTC 545
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CAAAGCTGACGAACGCCG-GGAACGCAAAGGAAAGCATTTGGAGCGAGCCCCTTCTTCTC 812
consensus_8747#1      TTCAGATGGTGAAAGTAATAAAAGGACCATCATCCTATTTCTAAGGATTTTTTTTTCAAT 655
                                                                                  

consensus_8747#2      CCGGCAAGCGGAAACGCTTGGAGGAGA--------------------------------- 572
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CCGGCAAGCGGAAACGCTTGGAGGAGAAGCAAAAGCTGCGCGAAAGTGCCGGAAAGCTAA 872
consensus_8747#1      TTGACAGGGTCCTA---------------------------------------------- 669
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TCGGGCATCAAATCAAAATGTCCAAAATGAAACACTCATCTTCGCTTGTCCCACCTTCCC 932
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CGGCGCCGTCGCAAAATACGGATGATAGTATGGATGCGGTTCCATTTTTGCCACAAAATC 992
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      ATCATTTGCAACATTTGAGCAGCGATAGTACGAAACCGATCGTGCCCAAAAACGATACTC 1052
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CCAACAAATTTTGGCTCTCAGTCGAGCCGTACTGTATGCCGATCTCTCACGAAGATCTGA 1112
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      AACTGTTGGACGATCTGTTGGAAGAGTATTCGGGCCCACTGATTCCTCCGATACCTGAGC 1172
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TGGGACCGCACTACAGCACTCAGTGGGCGGCGGATGACATAAAAGAGGAACAGGATGGTG 1232
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TTGCAAACTCAGCTAGCTCCAAATCCAAATCAAAGCCCCTAACCAATGGCGACGTTAGTA 1292
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      AAAAAGAAAAGTTAATGGGTGAGGGTATCACTGGCCCTCTGACACAAAGACTGGTGTCGG 1352
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CGCTGATGGANGAGAACCTGAATCCCGACTGTAGCAGCAACGAGAACAGCAATAGTAGCT 1412
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CCGATGTTACCCATAGCAATAATGCTCGCAGTGCCGTGGCATTGCTGAAAATGGTATCAG 1472
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TATCGAGCGGANGGTTCGCAAGGAGCTAATCGAGCAGGGCATCCTTGACGCGGACGATAT 1532
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      GCCGAAAAGTCAGCAGGACGATGAAATCCTATCAGAAATCAACCGCGTTCGCACAGAGCT 1592
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      GGCGGTAATAGCCGAGTACAATTCGAACGAAATACGTAAACTACAATCGATGGCAAAGGA 1652
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      TGAAATGAAACGCATCGAAGTCAAGCGTAAGCTGGACCGAGTAGATCAGGAGATAATGGA 1712
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      CACATATCAGAAGGTGATTGCGGCTCGACTTAAGCGTCGTCCACTGACCAAACAAGAACG 1772
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      AGATGAGGTGTATCGATTGACCGAGGAGCAAAAGCGTCTTTCGGATCAGTTGGAGCTAAT 1832
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      ------------------------------------------------------------
consensus_8747#3      ------------------------------------------------------------
consensus_8747#0      GCCTGTCCATGGGCCGTTTGGAAGAGCTACCAACTAATATGCCGTTAAACTGCGATTTCG 1892
consensus_8747#1      ------------------------------------------------------------
                                                                                  

consensus_8747#2      -----------------------------------------------------------
consensus_8747#3      -----------------------------------------------------------
consensus_8747#0      TGAGCAACAAAGATGTATTCGGTATGATCAATATAGAACACGTTTAAAAGGTTAAAAAA 1951
consensus_8747#1      -----------------------------------------------------------