Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8755 cluster # 8755       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8755#0 length = 1025 sequences # 3  
consensus_8755#1 length = 773 sequences # 7  
consensus_8755#2 length = 734 sequences # 2  

consensusID : consensus_8755#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1025
fasta sequence
                              [ATTACGCCCTGGAACTTTCCGCACGCCATGATCACGCGCAAAGCGGCCGCGGCCATTGCGGCGGGCTGTACGGTGGTTATAAAGCCGGCCGAAGACACGCCACTGACCGCGCTGGCGTTGGCTCGGCTCGCTGAGGAGGCCGGCTTTCCGAAGGGTGTTATCAACGTGATAACGAGCAGCCGAACGCACGCGGCCGAAATTGGGCAGCTGCTGTGCGGTAGCGATAAGGTGGCGGCCATTTCGTTTACCGGCTCGACCGAGGTCGGCAAGCTGCTGTACCGGCAGTGCGCGGACGGGGTAAAGCGCATCGGGCTCGA---ACTGGGCGGCAATGCACCGTTCATCGTGTTTAAGTCGGCCGACATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAGCTGATCGAGCGCATTCGCAAGCTGGCGATCGGCGATGGCAGTCGGGATGGCGTGCAGATTGGTCCGCTCATCAATCAGGCCCAGCTGAAGAAGGTGGACCAGTTCGTGCAGGATGCGAAGGACAAGGGTGCCAAAGTGCACACGGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTACTACGAGCCAACGGTCGTGACGGATCTGCGCGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCGGGCTATTTCTTCTCGAACGATATGAACCAGGTGTTCCGGGTGGCGCGCCAGGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGGTCGGGAATTGGACGCGAAGGGCTCACGCCAACCGGGGATCGATCGCAATATGTCTAACAGTTAACACATATCNTGTGGCTATGGGCAATTCTCCCA]

[+] EMBL BX603202             [ATTACGCCCTGGAACTTTCCGCACGCCATGATCACGCGCAAAGCGGCCGCGGCCATTGCGGCGGGCTGTACGGTGGTTATAAAGCCGGCCGAAGACACGCCACTGACCGCGCTGGCGTTGGCTCGGCTCGCTGAGGAGGCCGGCTTTCCGAAGGGTGTTATCAACGTGATAACGAGCAGCCGAACGCACGCGGCCGAAATTGGGCAGCTGCTGTGCGGTAGCGATAAGGTGGCGGCCATTTCGTTTACCGGCTCGACCGAGGTCGGCAAGCTGCTGTACCGGCAGTGCGCGGACGGGGTAAAGCGCATCGGGCTCGA   ACTGGGCGGCAATGC CCGTTCATCGTGTTTAAGTCGGCCGACATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAACTGATCGAGCGCATTCGCAAGCTGGCGATCGGCGATGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM628372             [                                                                                                                                                                                                                                                    ccgCCGGCTCGACCGAGGTCGGCAAGCTGCTGTACCGGCAGTGCGCGGACGGGGTCAAGCGCATCGGGCTCGA   GCTGGGCGGCAATGCACCGTTCATCGTGTTTAAGTCGGCCGACATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAGCTGATCGAGCGCATTCGCAAGCTGGCGATCGGCGATGGCAGTCGGGATGGCGTGCAGATTGGTCCGCTCATCAATCAGGCCCAGCTGAAGAAGGTGGACCAGTTCGTGCAGGATGCGAAGGACAAGGGTGCCAAAGTGCACACGGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTACTACGAGCCAACGGTCGTGACGGATCTGCGCGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCGGGCTATTTCTTCTCGAACGATATGAACCAGGTGTTCCGGGT                                                                                                                                                                                       ]
[+] EMBL BX467881             [                                                                                                                                                                                                                                                                                                          aggccagaATC GGCACGATGGACTGGGCGGCAATGCACCGTTCATCGTGTTTAAGTCGGCCGACATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAGCTGATCGAGCGCATTCGCAAGCTGGCGATCGGCGATGGCAGTCGGGATGGCGTACAGATTGGTCCGCTCATCAATCAGGCCCAGCTGAAGAAGGTGGACCAGTTCGTGCAGGATGCGAAGGACAAGGGTGCCAAAGTGCACACCGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTATTACGAGCCAACGGTCGTGACGGATCTGCGGGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCCGGCTATTTCTTCTCGAACGATCTGAACCAGGTGTTCCGGGTGGCGCGCCAGGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGGTCGGGAATTGGACGCGAAGGGCTCACGCCAACCGGGGATCGATCGCAATATGTCTAACAGTTAACACATATCNTGTGGCTATGGGCAATTCTCCCA]


>consensus_8755#0 ATTACGCCCTGGAACTTTCCGCACGCCATGATCACGCGCAAAGCGGCCGCGGCCATTGCG GCGGGCTGTACGGTGGTTATAAAGCCGGCCGAAGACACGCCACTGACCGCGCTGGCGTTG GCTCGGCTCGCTGAGGAGGCCGGCTTTCCGAAGGGTGTTATCAACGTGATAACGAGCAGC CGAACGCACGCGGCCGAAATTGGGCAGCTGCTGTGCGGTAGCGATAAGGTGGCGGCCATT TCGTTTACCGGCTCGACCGAGGTCGGCAAGCTGCTGTACCGGCAGTGCGCGGACGGGGTA AAGCGCATCGGGCTCGAACTGGGCGGCAATGCACCGTTCATCGTGTTTAAGTCGGCCGAC ATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGC ATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAGCTG ATCGAGCGCATTCGCAAGCTGGCGATCGGCGATGGCAGTCGGGATGGCGTGCAGATTGGT CCGCTCATCAATCAGGCCCAGCTGAAGAAGGTGGACCAGTTCGTGCAGGATGCGAAGGAC AAGGGTGCCAAAGTGCACACGGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTACTAC GAGCCAACGGTCGTGACGGATCTGCGCGACAACATGCTGCTGTACAACGAGGAAGTGTTC GGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAAC GGTACGCGGCGCGGACTGGCGGGCTATTTCTTCTCGAACGATATGAACCAGGTGTTCCGG GTGGCGCGCCAGGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGAC GGAGGCTGCATTCGGCGGCATAAAGGAGGTCGGGAATTGGACGCGAAGGGCTCACGCCAA CCGGGGATCGATCGCAATATGTCTAACAGTTAACACATATCNTGTGGCTATGGGCAATTC TCCCA



consensusID : consensus_8755#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 773
fasta sequence
                              [GGCCAAGAATCGGCACGNNGAGAATCTCGGGCACGACATCCCGCCGTTCGTGCTTCTAATCAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACACTGTGACGGCTTGCACAACGCGAACAATGCATAGCAATCCGCTGAAGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC-GGGCCGCCCTGTTG-AAGAACTGGCACGCA-CTG-ATGGA-G-AAGAACCGGCAGGAGAT-TG-CGAGC-ATCATGA-CGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGGGGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTACGGCGAGATCGTCCCGTCGCCGGTCGCCAATCGGCAGATTATGATGACGCGCAATCCNGTCGGTGTGGCGGGCCTGATTACGCCCCTGG-AACTTTCCGCACGCCATGATCACG]

[+] EMBL BX467129             [GGCCAAGAATCGGCACGNNGAGAATCTCGGGCACGACATCCCGCCGTTCGTGCTTCTAATCAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACACTGTGACGGCTTGGACAACGCGAACAATGCATAGTAATCCGCTGAAGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGATGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGCAGGGCCG CCTGTTGCAAGAACTGGCACGCACCTGAATGGACGCAAGAACCGGCAGGAGATATGCCGAGCAATCATGACCGGCC                                                                                                                                                                                                              ]
[+] EMBL BM597770             [                      ccgCTCGGGCACGACATCCCGCCGTTCGTGCTTCTAATCAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGTCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGAGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACACTGTGACGGCTTGCACAACGCGAACAATGCATAGCAATCCGCTGAGGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCAGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTGTTG AAGAACTGGCACGCA CTG ATGGA G AAGAACCGGCAGGAGAT TG CCAGC ATCATGA CGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGGGGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTACGGCGAGATCG                                                                                                       ]
[+] EMBL BX622177             [                            GGGCACGACATCCCGCCGTTCGTGCTTCTAATCAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACAGTGTGACGGCTTGCACAACGCGAACAATGCACAGCAATCCGCTGAAGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTGTTG AAGAACTGGCACGCA TTG ATGGA G AAGAACCGGCAGGAGAT TG CGAGC ATCATGA CNGNCGAGTCGGGCAAACCGCTGGTGGAATCGCTCNGGGANGTCGCGTACGGTAACTCGTTCGTCCAATGGTTCGCGGANGAGGCTCG                                                                                                                           ]
[+] EMBL BX621675             [                                     ATCCCGCCGTTCGTGCTTCTAATCAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACAGTGTGACGGCTTGCACAACGCGAACAATGCACAGCAATCCGCTGAAGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTGTTG AAGAACTGGCACGCA TTG ATGGA G AAGAACCGGCAGGAGAT TG CGAGC ATCATGA CGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGGGGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTACGGCGAGATCGTCCCGTCGCCGGTCGCCAATCGGCAGATTATGATGACGCGCAATCCNGTCGGTGTGGCGGGCCTGATTACGCCCCTGG AACTTTCCGCACGCCATGATCACG]
[+] EMBL BM647521             [                                                                            ccgGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGTCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGAGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACACTGTGACGGCTTGCACAACGCGAACAATGCATAGCAATCCGCTGAGGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGC CCACCTTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCAGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTGTTG AAGAACTGGCACGCA CTG ATGGA G AAGAACCGGCAGGAGAT TG CCAGC ATCATGA CGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGGGGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTACGGCGAGATCGTCCCGTCGCCGGTCGCCAATAGGCAGATTATGATGACGCGCAATCCGGTCGGTGTGGCGGGCCTGATTACGCCCCTGGAAACTTTCCGCACGCCATGAT    ]
[+] EMBL BX624153             [                                                                                     CTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGTTTCAACAGTGTGACGGCTTGCACAACGCGAACAATGCACAGCAATCCGCTGAAGCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCNTCGACGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTGTTG AAGAACTGGCACGCA TTG ATGGA G AAGAACCGGCAGGAGAT TG CGAGC ATCATGA CGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGGGGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGC                                                                                                                          ]
[+] EMBL BM611136             [                                                                                                                                                                                                                                                                                                                                                                                                 GTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCAGCTGGCCATCGATGCAGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGCCAAGGAGC GGGCCGCCCTG                                                                                                                                                                                                                                                                                      ]


>consensus_8755#1 GGCCAAGAATCGGCACGNNGAGAATCTCGGGCACGACATCCCGCCGTTCGTGCTTCTAAT CAATCAAACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCC GTTAGATAACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGAT TCGTTCAGTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCG TTTGAGTTTCAACACTGTGACGGCTTGCACAACGCGAACAATGCATAGCAATCCGCTGAA GCAGAGCCAGGCGTACGTCAATGGCAGCTGGATTGGGGCCCGGTCGGGCGCCACCTTCGA CGTGCAGAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGA CGTGCAGCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAG CACCGCCAAGGAGCGGGCCGCCCTGTTGAAGAACTGGCACGCACTGATGGAGAAGAACCG GCAGGAGATTGCGAGCATCATGACGGCCGAGTCGGGCAAACCGCTGGTGGAATCGCTCGG GGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTA CGGCGAGATCGTCCCGTCGCCGGTCGCCAATCGGCAGATTATGATGACGCGCAATCCNGT CGGTGTGGCGGGCCTGATTACGCCCCTGGAACTTTCCGCACGCCATGATCACG



consensusID : consensus_8755#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 734
fasta sequence
                              [TGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGATGCGAAGGACAAGGGTGCCAAAGTGCACACCGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTATTACGAGCCAACGGTTCGTGACGGATCTGCGGGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCCGGCTATTTCTTCTCGAACGATCTGAACCAGGTGTTCCGGGTGGCGCGCCAGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGTCGGGAATTGGACGCGAAGGCTCACGCCACGGGATCGATGAATATGTCTACATAAAATATCTGTGCTATGGCAATCTCCAGTAAGCTGGATGTGCTAGTAATAAGGCAATAGGCACGGTAGGTGCTACTAGTCATCTGCAACGCAATGAATAATTCCGCAGCATTATATGCATAACTTGCGCACACTGAAACATGCAACTCCATTGTACGTCTTCCATTTGCTTGGACAAGAAAATACCAATGCGTTAGGCATTAAGTTATAACTG-----TATATGTAAACGAAACTGTTTAATCAATAAATCACA]

[+] EMBL BX628530             [TGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCATTTCGGCGAACCGGTTCCTGATACAGGACGAGGATGCGAAGGACAAGGGTGCCAAAGTGCACACCGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTATTACGAGCCAACGGTTCGTGACGGATCTGCGGGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCCGGCTATTTCTTCTCGAACGATCTGAACCAGGTGTTCCGGGTGGCGCGCCAGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGTCGGGAATTGGACGCGAAGGCTCACGCCACGGGATCGATGAATATGTCTACATAAAATATCTGTGCTATGGCAATCTCCAGTAAGCTGGATGTGCTAGTAATAAGGCAATAGGCACGGTAGGTGCTACTAGTCATCTGCAACGCAATGAATAATTCCGCAGCATTATATGCATAACTTGCGCACACTGAAACATGCAACTCCATTGTACGTCTTCCATTTGCTTGGACAAGAAAATACCAATGCGTTAGGCATTAAGTTATAACTG     TATATGTAAACGAAACTGTTTAATCAATAAATCACA]
[+] EMBL BM583827             [                                                                                                                                                   ccGGTCCGCTCTACTACGAGCCAACGG TCGTGACGGATCTGCGCGACAACATGCTGCTATACAACGAGGAAGTGTTCGGTCCGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCCCTGGCCATCGCTAACGGTACGCGGCGCGGACTGGCCGGCTATTTCTTCTCGAACGATCTGAACCAAGTGTTCCGGGTGGCGCGCCAGCTCGAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGTCGGGAATTGGACGCGAAGGCTCGCGCCACGGGATCGATGAATACGTCTACATCAAATATCTGTGCTATGGCAATCTCCAGTAAGCTGGATATGCTAATAATAAGGCAATAGGCACGGTAGGTGCTACTAGTCATCTGCAACGCAATGAATAATTCCGCAGCATTATATGCATAACTTGCGCACACTGAAACATGCAACTCCATTGTACGTCTTCCATTTGCTTGGACAAGAAATTACCAATTTATTAGGCATTAAGTTATAACTGTATACTATATGTAAACGAA                      ]


>consensus_8755#2 TGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGCA TTTCGGCGAACCGGTTCCTGATACAGGACGAGGATGCGAAGGACAAGGGTGCCAAAGTGC ACACCGGTGGCAAAACACTGCCCGAGCTGGGTCCGCTCTATTACGAGCCAACGGTTCGTG ACGGATCTGCGGGACAACATGCTGCTGTACAACGAGGAAGTGTTCGGTCCGGTCGTGTCG GTGGTACGGTTCAAGACGGAAGCCGAAGCACTGGCCATCGCTAACGGTACGCGGCGCGGA CTGGCCGGCTATTTCTTCTCGAACGATCTGAACCAGGTGTTCCGGGTGGCGCGCCAGCTC GAGACGGGCATGATCGGCATCAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGC GGCATAAAGGAGTCGGGAATTGGACGCGAAGGCTCACGCCACGGGATCGATGAATATGTC TACATAAAATATCTGTGCTATGGCAATCTCCAGTAAGCTGGATGTGCTAGTAATAAGGCA ATAGGCACGGTAGGTGCTACTAGTCATCTGCAACGCAATGAATAATTCCGCAGCATTATA TGCATAACTTGCGCACACTGAAACATGCAACTCCATTGTACGTCTTCCATTTGCTTGGAC AAGAAAATACCAATGCGTTAGGCATTAAGTTATAACTGTATATGTAAACGAAACTGTTTA ATCAATAAATCACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8755#0      ATTACGCCCTGGAACTTTCCGCACGCCATGATCACGCGCAAAGCGGCCGCGGCCATTGCG 60
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      GCGGGCTGTACGGTGGTTATAAAGCCGGCCGAAGACACGCCACTGACCGCGCTGGCGTTG 120
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      GCTCGGCTCGCTGAGGAGGCCGGCTTTCCGAAGGGTGTTATCAACGTGATAACGAGCAGC 180
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      CGAACGCACGCGGCCGAAATTGGGCAGCTGCTGTGCGGTAGCGATAAGGTGGCGGCCATT 240
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      TCGTTTACCGGCTCGACCGAGGTCGGCAAGCTGCTGTACCGGCAGTGCGCGGACGGGGTA 300
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      AAGCGCATCGGGCTCGAACTGGGCGGCAATGCACCGTTCATCGTGTTTAAGTCGGCCGAC 360
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      ATGGAGAAAGCACTGACCGGGGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTGC 420
consensus_8755#2      ------------------------------------------------------------
consensus_8755#1      -----------------------------------------------------GGCCAAG 7
                                                                                  

consensus_8755#0      ATTTCGGCGAACCGGTTCCTGATACAGGACGAGGTGCACGATGAGTTCGTGGCGAAGCTG 480
consensus_8755#2      ----------------------------------------------------------TG 2
consensus_8755#1      AATCGGCACGNNGAGAATCTCGGGCACGACATCCCGCCGTTCGTGCTTCTAATCAATCAA 67
                                                                                  

consensus_8755#0      ATCGAGCGCATTCGCAAGCT-GGCGATCGGCGATGGCAGTCGGGATGGCGTGCAGATTGG 539
consensus_8755#2      GA-GAAAGCACTGACCGG---GGCCATGAACTCCAAGTTCCGGAACTGCGGCCAGACGTG 58
consensus_8755#1      ACGGTCAATATTGGCATACTTTGTTCTCACTATCGGTTCGCCAAATAATAGCCGTTAGAT 127
                         *     * *  *       *   *             *   *       *       

consensus_8755#0      TCCGCTCATCAATCAGGCCCAGCTGAAGAAGGTGGACCAGTT-CGTGCAGGATGCGAAGG 598
consensus_8755#2      CATTTCGGCGAACCGGTTCCTGATACAGGACG----------------AGGATGCGAAGG 102
consensus_8755#1      AACGCTTGCGATTAAAACGCGAAACCCCCTCGTCACCGTGTCGTGAAAATGATTCGTTCA 187
                                *        *           *                * *** **    

consensus_8755#0      ACAAGGGTGCCAAAGTGCACA--CGGGTGGCAAAACACT--GCCCGAGCTGGGTCCGCTC 654
consensus_8755#2      ACAAGGGTGCCAAAGTGCACA--CCGGTGGCAAAACACT--GCCCGAGCTGGGTCCGCTC 158
consensus_8755#1      GTTTTGCTCCTGCGCTCCACGGGCAAGTGGTACTACGGTCGATCCGGATTGCGTTTGAGT 247
                           * * *     * ***   *  **** *  **  *    ***   ** **  *   

consensus_8755#0      TACTACGAGCCAACGGT---CGTGACG-GATC--TGCGCGACAACATGCTGCTGTACAAC 708
consensus_8755#2      TATTACGAGCCAACGGTT--CGTGACG-GATC--TGCGGGACAACATGCTGCTGTACAAC 213
consensus_8755#1      TTCAACACTGTGACGGCTTGCACAACGCGAACAATGCATAGCAATCCGCTGAAGCAGAGC 307
                      *   **      ****    *   *** ** *  ***    ***   ****  * * * *

consensus_8755#0      GAGGAAGTGTTCGGTC-CGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACT 767
consensus_8755#2      GAGGAAGTGTTCGGTC-CGGTCGTGTCGGTGGTACGGTTCAAGACGGAAGCCGAAGCACT 272
consensus_8755#1      CAGGCGTACGTCAATGGCAGCTGGATTGG-GGCCCGGTCGGGCGCCACCTTCGACGTGCA 366
                       ***      **  *  * *  *  * ** **  ****      *      *** *  * 

consensus_8755#0      GGCCATCGCTAACGGTACGCGGCGCGGACTGGCGGGCTATTTCTTCTCGAACGATATGAA 827
consensus_8755#2      GGCCATCGCTAACGGTACGCGGCGCGGACTGGCCGGCTATTTCTTCTCGAACGATCTGAA 332
consensus_8755#1      GAACCCTGCCAACGGTGCGGTGCTGGGAGCGGTACCGGACATGGCCCGGGATGACGTGCA 426
                      *  *   ** ****** **  **  ***  **      *  *   *  * * **  ** *

consensus_8755#0      CCAGGTGTTCCGGGTGGCGCGCCAGGCT-----CGAGACG----GGCATGAT--CGGCAT 876
consensus_8755#2      CCAGGTGTTCCGGGTGGCGCGCCAG-CT-----CGAGACG----GGCATGAT--CGGCAT 380
consensus_8755#1      GCTGGCCATCGATGCTGCGTACGACGCGTTCTACGAGCCGCGATGGCATAACAGCACCGC 486
                       * **   **   *  ***  * *  *      **** **    ***** *   *  *  

consensus_8755#0      CAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAGGTCGGGAA 936
consensus_8755#2      CAACGAGGGACTCATCTCGGCGACGGAGGCTGCATTCGGCGGCATAAAGGAG-TCGGGAA 439
consensus_8755#1      CAAGGAGCGGGCCGCCCTGTTGA-AGAACTGGCACGCACTGATGGAGAAGAA-CCGGCAG 544
                      *** *** *   *  *  *  **  **    ***  *   *    * * **   *** * 

consensus_8755#0      TTGGACGCGAAGGGCTCACGCCAACCGGGGATCGATCGCAATATGTCTAACAGTTAACAC 996
consensus_8755#2      TTGGACGCGAAGG-CTCACGCCAC---GGGATCGAT--GAATATGTCTA-CATAAAATAT 492
consensus_8755#1      GAGATTGCGAGCA--TCATGACGGCC--GAGTCGGGCAAACCGCTGGTGGAATCGCTCGG 600
                        *   ****     *** * *      *  ***     *       *   *        

consensus_8755#0      ATATCNTGTG-GCTATGGGCAATTCTCCCA------------------------------ 1025
consensus_8755#2      CTGTGCTATG-GCAATCTCCAGTAAGCTGGATGTGCTAGTAATAAGGCAATAGGCACGGT 551
consensus_8755#1      GGAGGTCGCGTACGGTAACTCGTTCGTCGAATGGTTCGCGGAGGAGGCTCGCCGCATCTA 660
                               *  *  *      *                                     

consensus_8755#0      ------------------------------------------------------------
consensus_8755#2      AGGTGCTACTAGTCATCTGCAACGCAATGAATAATTCCGCAGCATTATATGCATAACTTG 611
consensus_8755#1      CGGCGAGATCGTCCCGTCGCCGGTCGCCAATCGGCAGATTATGATGACGCGCAATCCNGT 720
                                                                                  

consensus_8755#0      ------------------------------------------------------------
consensus_8755#2      CG-CACACTGAAACATGCAACTCCATTGTACGTCTTCCATTTGCTTGGACAAGAAAATAC 670
consensus_8755#1      CGGTGTGGCGGGCCTGATTACGCCCCTGGAACTTTCCGCACGCCATGATCACG------- 773
                                                                                  

consensus_8755#0      ------------------------------------------------------------
consensus_8755#2      CAATGCGTTAGGCATTAAGTTATAACTGTATATGTAAACGAAACTGTTTAATCAATAAAT 730
consensus_8755#1      ------------------------------------------------------------
                                                                                  

consensus_8755#0      ----
consensus_8755#2      CACA 734
consensus_8755#1      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)