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Anopheles gambiae
cluster # 8761 cluster # 8761       Sequences # 12       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8761#0 length = 1807 sequences # 9  
consensus_8761#1 length = 659 sequences # 1  
 consensus_8761#2 length = 651 sequences # 1  
consensus_8761#3 length = 447 sequences # 1  
consensusID : consensus_8761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1807
fasta sequence 
                              [CCGGTTCTAGATCGCGATCTAGAACTAGGCTGATTGAAATTTTGGAAGTTCATAGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATCGAACGTCTGTGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAAAACGACTCTGCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGTATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTATACGTGTTCTACCGTGCAAGCACGAGTTCCATAAGGTCTGCATAGATCCATGGCTACTTGAGCATCGTACCTGCCCAATGTGCAAAATGGACATTCTGAAGCATTATGGCTTTGTGGTGGGTTCTTCCTCATCTTCTCAAATCAATTCAGCGATCGCAGAATATCTAA-ATGTTGCCCCACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGATGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGT-AGCGGTGCGAGTGGCGGTGGCAGCAACAGTAG-GATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGT-AAATTGTAGTAGCGCTA-GTGCTAGTAGTAACGACAGGGACAATAGT-AAT-TGTGA-TAACGGTAATACAATCAG--CAACGA-CAGT-AA-CGA-AAGTAA-CAGCGACAG-CCATCTT-ATA-AGCAGAA--AAATAACAGATGTGTAAATGCATCTTAATAACATATACT-ATTTAGT-AAT-AGTCCTG-A-AACAATGCTTG-ACGATAGTTAACGATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTGATACACAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGTGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGTTTAACCGTGTAAGATTCTGTGATACAAACTTGAGACATAAATATGATAATTTTGTCACTATCGTAATCGAACTCATTCAGCTTCCGTCAGCGCTGTTATTTGAAACGATGCTACTATTACTAATTACTATTGATCCCGTCTTAGCTGTAGAGTTAAACAGGCGCAGCTGAAATGGTGATGAGATACAGACTAAGAGATAGAAAGAAAAATAAAAGAGAGAAAGAAATACAAAAAGGAAATGAACGATTTATAGAAAAAAGATAAGGATAAATAGAGCTGAAAGAAAGAGAAAGAAAAGAAGACGTAAAGATAGAAAAGGAGAACGAGAGAGTTGGACGGACAGATTAAAGTAGCAGGACAATCAAAGAATATCCTTATTTTTTCGGTATCCCACCATATTACAAGGGTACAGCATTATGGTAATACACGAACGTTTGGGCATAGGCGGAATATCATAGA]

[+] EMBL BM633567             [CCGGTTCTAGATCGCGATCTAGAACTAGGCTGATTGAAATTTTGGAAGTTCATAGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATCGAACGTCTGTGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAAAACGACTCTGCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGTATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTATACGTGTTCTACCGTGCAAGCACGAGTTCCATAAGGTCTGCATAGATCCATGGCTACTTGAGCATCGTACCTGCCCAATGTGCAAAATGGACATTCTGAAGCATTATGGCTTTGTGGTGGGTTCTTCCTCATCTTCTCAAATCAATTCAGCGATCGCAGAATATCTAA ATGTTGCCCCACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM621370             [                                                                                                                                                                                                                                                                                             CCGAGAGTATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTATACGTGTTCTACCGTGCAAGCACGAGTTCCATAAGGTCTGCATAGATCCATGGCTACTTGAGCATCGTACCTGCCCAATGTGCAAAATGGACATTCTGAAGCATTATGGCTTTGTGGTGGGTTCTTCCTCATCTTCTCAAATCAATTCAGCGATCGCAGAATATCTAA ATGTTGCCCCACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGACAGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGT AGCGGTGCGAGTGGCGGTGGCAGCAACAGTAG GATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGT AAATTGTAGTAGCGCTA GTGCTAGTAGTAACGACAGGGACAATAGT AAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AL929958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aggTTAAGCGATCGCAGAATATCTAACATGTTG CCCACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTG CACAGTGGATGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGTCAGCGGTGCGAGTGGCGGTGGCAGCAACAGTAGCGATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGTNACATTGTAGTAGCGTTACGTGCTAGTAGTAACGACAGGGACAATAGTCAATNGGTGACTAACGGTAATACAATCAGGCCAACGACCAGTCAACCGACAAGTAACCAGCGACAGCCCATCTTCATACAGCAGAAACAAATAACAGATGTGTAAATGCATCTTAATAACNTATACTCATTNAGTCAATCAGTCCTGCACAACANTGCTTGCACGATNGTTAACGATGAAGAAGngc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX621305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGATGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGT AGCGGTGCGAGTGGCGGTGGCAGCAACAGTAG GATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGT AAATTGTAGTAGCGCTA GTGCTAGTAGTAACGACAGGGACAATAGT AAT TGTGA TAACGGTAATACAATCAG  CAACGA CAGT AA CGA AAGTAA CAGCGACAG CCATCTT ATA AGCAGAA  AAATAACAGATGTGTAAATGCATCTTAATAACATATACT ATTTAGT AAT AGTCCTG A AACAATGCTTG ACGATAGTTAACGATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCCGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTGATACACAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGTGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGNTTAACCGTGTAAGATTCTGTGATACCAACTTGAGACAT AATATGATAATTTTGTCNCTATCGTAATCGAACTC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM588395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGATGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGT AGCGGTGCGAGTGGCGGTGGCAGCAACAGTAG GATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGT AAATTGTAGTAGCGCTA GTGCTAGTAGTAACGACAGGGACAATAGT AAT TGTGA TAACGGTAATACAATCAG  CAACGA CAGT AA CGA AAGTAA CAGCGACAG CCATCTT ATA AGCAGAA  AAATAACAGATGTGTAAATGCATCTTAATAACATATACT ATTTAGT AAT AGTCCTG A AACAATGCTTG ACGATAGTTAACGATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09KSI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGTTTAGCTTACTGATATCGTAACAATCATTACCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGT AGCGGTGCGAGTGGCGGTGGCAGCAACAGTAG GATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGT AAATTGTAGTAGCGCTA GTGCTAGTAGTAACGACAGGGACAATAGT AAT TGTGA TAACGGTAATACAATCAG  CAACGA CAGT AA CGA AAGTAA CAGCGACAG CCATCTT ATA AGCAGAA  AAATAACAGATGTGTAAATGCATCTTAATAACATATACT ATTTAGT AAT AGTCCTG A AACAATGCTTG ACGATAGTTAACGATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTGATACACAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGAGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGTTTAACCGTGTAAGATTCTGTGATACAAACTTGAGACATAAATATGATAATTTTGTCACTATCGTAATCGAACTCATTCAGCTTCCGTCAGCGCTGTTATTTGAAACGATGCTACTATTACTAATTACTATTGATCCCGTCTTAGCTGTAGAGTTAAACAGGCGCAGCTGAAATGGTGATGAGATACAGACTAAGAGATAGAAAGAAAAATAAAAGAG                                                                                                                                                                                                                                                  ]
[+] EMBL BX626176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cagcTAA GAC GGGACAATAGT AAT TGNGA TAACGGNAATACAATCAG  CAACGA CAGT AA CGA AAGTAA CAGCGACAG CCATCTT ATA AGCAGAA  AAATAACAGATGNGTAAATGCATCTTAATAACATATACT ATTTAGT AAT AGTCCTG A AACAATGCTTG ACGATAGTNAACGATGAAGAAGGCAATCCNAAACTGNGCCATGCGAGCCGGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM650736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccGCTCGTCTGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTGATACACAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGTGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGTTTAACTGTGTAAGATTCTGTGATACAAACTTGAGACATAAATATGATAATTTTGTCACTATCGTAATCGAACTCATTCAGCTTCCGTCAGCGCT TTATTTGAAACGATGCTACTATTACTAATTACTATTGATCCCGTCTTAGCTGTAGAGTTAAACAGGCGCAGCTGAAATGGTGATGAGATACGGACTAAGAGATAGAAAGAAAAATAAAAGAGAGAAAGAAATACAAAAAGGAAATGAACGATTTATAGAAAAAAGATAAGGATAAATAGAGCTGAAAGAAAGAGAAAGAAAAGAAGACGTAAAGATAGAAAAGGAGAACGAGAGAGTTGGACGGACAGATTAAAGTAGCAGGACAATCAAAGAATATCCTTATTTTTTCGGTATCCCACCATATTACAAGGGTACAGCATTATGGTAATACACGAACGTTTGGGCATAGGCGGAATATCATAGA]
[+] EMBL BX618033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTTATACACAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGTGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGTTTAACCGTGTAAGATTCTGTGATACAAACTTGAGACATAAATATGATAATTTTGTCACTATCGTAATCGAACTCATTCAGCTTCCGTCAGCGCTGTTATTTGAAACGATGCTACTATTACTAATTACTATTGATCCCGTCTTAGCTGTAGAGTTAAACAGGCGCAGCTGAAATGGTGATGAGATACAGACTAAGAGATAGAAAGAAAAATAAAAGAGAGAAAGAAATACAAAAAGGAAATGAACGATTTATAGAAAAAAGATAAGGATAAATAGAGCTGACAGAAAGAGAAA                                                                                                                                                                       ]




>consensus_8761#0
CCGGTTCTAGATCGCGATCTAGAACTAGGCTGATTGAAATTTTGGAAGTTCATAGATCCG
TTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATC
GAACGTCTGTGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTT
GGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAA
AACGACTCTGCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGTATTAAAT
CAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAA
CTGATGTTATACGTGTTCTACCGTGCAAGCACGAGTTCCATAAGGTCTGCATAGATCCAT
GGCTACTTGAGCATCGTACCTGCCCAATGTGCAAAATGGACATTCTGAAGCATTATGGCT
TTGTGGTGGGTTCTTCCTCATCTTCTCAAATCAATTCAGCGATCGCAGAATATCTAAATG
TTGCCCCACCGCCACCGCCCTCTAATACGTCTACCATCACTACCTCCTCAATTGCTTCGA
CTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGT
CTGCCACAGTGGATGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTC
GCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCG
ATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGTAGCGGTGCGAGTG
GCGGTGGCAGCAACAGTAGGATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGTAA
ATTGTAGTAGCGCTAGTGCTAGTAGTAACGACAGGGACAATAGTAATTGTGATAACGGTA
ATACAATCAGCAACGACAGTAACGAAAGTAACAGCGACAGCCATCTTATAAGCAGAAAAA
TAACAGATGTGTAAATGCATCTTAATAACATATACTATTTAGTAATAGTCCTGAAACAAT
GCTTGACGATAGTTAACGATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCG
TCTGACATTAGAGTCCACGTAGTCTGGAATTATTGTGTGTTCACTAGTTTCTTCAGTTGT
GTGATTAACTGGATAAACTTAAATGATTGATACACAATCAAATGAACAGACCATTAACAT
TGTAACATACGTCGAGTGAAATTAATTCGTAAATTTCGCCTAAAATAGACCAGCGACCCG
TAATAATCGCGTATTAAAACTTAATTGTTTAACCGTGTAAGATTCTGTGATACAAACTTG
AGACATAAATATGATAATTTTGTCACTATCGTAATCGAACTCATTCAGCTTCCGTCAGCG
CTGTTATTTGAAACGATGCTACTATTACTAATTACTATTGATCCCGTCTTAGCTGTAGAG
TTAAACAGGCGCAGCTGAAATGGTGATGAGATACAGACTAAGAGATAGAAAGAAAAATAA
AAGAGAGAAAGAAATACAAAAAGGAAATGAACGATTTATAGAAAAAAGATAAGGATAAAT
AGAGCTGAAAGAAAGAGAAAGAAAAGAAGACGTAAAGATAGAAAAGGAGAACGAGAGAGT
TGGACGGACAGATTAAAGTAGCAGGACAATCAAAGAATATCCTTATTTTTTCGGTATCCC
ACCATATTACAAGGGTACAGCATTATGGTAATACACGAACGTTTGGGCATAGGCGGAATA
TCATAGA

consensusID : consensus_8761#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence 
                              [GCAGATTCGGCACGNGGACTACTCCTCAATTGCTTCGCACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGACGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGTAGCGGTGCGAGTGGCGGTGGCAGCAACAGTAGGATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGTAAATTGTAGTAGCGCTAGTGCTAGTAGTAACGACAGGGACAATAGTAATTGTGATAACGGTAATACAATCAGCAACGACAGTAACGAAAGTAACAGCGACAGCCATCTTATAAGCAGAAAAATAACAGATGTGTAAATGCATCTTAATAACATATACTATTTAGTAATAGTCCTGAAACAATGCTTGACGATGTTAACAATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGGTCTGGAATTATTGGTGTGTTCACTAAGTTTCTTCAGTGGTGGTGATTAACCTTGGATT]

[+] EMBL BX467977             [GCAGATTCGGCACGNGGACTACTCCTCAATTGCTTCGCACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGACGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATACTGTTACGGGCAGTAGCGGTGCGAGTGGCGGTGGCAGCAACAGTAGGATGGGTGTATTATGCGATCTTTCAACGCATGACGTTGTAAATTGTAGTAGCGCTAGTGCTAGTAGTAACGACAGGGACAATAGTAATTGTGATAACGGTAATACAATCAGCAACGACAGTAACGAAAGTAACAGCGACAGCCATCTTATAAGCAGAAAAATAACAGATGTGTAAATGCATCTTAATAACATATACTATTTAGTAATAGTCCTGAAACAATGCTTGACGATGTTAACAATGAAGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGGTCTGGAATTATTGGTGTGTTCACTAAGTTTCTTCAGTGGTGGTGATTAACCTTGGATT]




>consensus_8761#1
GCAGATTCGGCACGNGGACTACTCCTCAATTGCTTCGCACTGAAGAATCATCGAGAAGAG
TTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGACGGGAGCA
TTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTG
GTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAG
GTCGTGGTGATACTGTTACGGGCAGTAGCGGTGCGAGTGGCGGTGGCAGCAACAGTAGGA
TGGGTGTATTATGCGATCTTTCAACGCATGACGTTGTAAATTGTAGTAGCGCTAGTGCTA
GTAGTAACGACAGGGACAATAGTAATTGTGATAACGGTAATACAATCAGCAACGACAGTA
ACGAAAGTAACAGCGACAGCCATCTTATAAGCAGAAAAATAACAGATGTGTAAATGCATC
TTAATAACATATACTATTTAGTAATAGTCCTGAAACAATGCTTGACGATGTTAACAATGA
AGAAGGCAATCCTAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAG
GTCTGGAATTATTGGTGTGTTCACTAAGTTTCTTCAGTGGTGGTGATTAACCTTGGATT

consensusID : consensus_8761#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence 
                              [GCAGAATTGCCCCCGTTAATGCAGATATTGGTCAGCTNCGTCTGCACAGTGTNTGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATACGAGAGTACCAACAGGTCGTGGTGATAATGTATACGGGACAAAAAACGGTGCGAGTGGCTGTGGCAGAACAGTAGGATGGGTGTATNATGCGACTTTCANACGGCATGACTGTTGTCACTANGTAGATNGCCGCTAGTGCTAGTCAGTACACGACAAGNGGACCAATTAGTAAATTAGTCGATAAACCGAGTCAATACAAATCAGCCACAACGGACCAGATAACGCACAAGTAAACAAGGAACAGACATCTTATACAAGCACGANCACACNTAACACGNTGTGTANAACTGCATCCTTACTTACACCCTATAACTATTACAAGCAATACGTCCCTGACAACANGTGCTTGACGATACGTACACGNATAGACACGAACGGAATCCTAAACTGNTGCCAATGCGCGCCGGCTCGNCTGAACATTAAGAGTCCCACAGATAANATCTGGCAACTNACTCGNGNTGNCACATAAGGTTTCCTACCAAGA]

[+] EMBL AL695814             [GCAGAATTGCCCCCGTTAATGCAGATATTGGTCAGCTNCGTCTGCACAGTGTNTGGGAGCATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATACGAGAGTACCAACAGGTCGTGGTGATAATGTATACGGGACAAAAAACGGTGCGAGTGGCTGTGGCAGAACAGTAGGATGGGTGTATNATGCGACTTTCANACGGCATGACTGTTGTCACTANGTAGATNGCCGCTAGTGCTAGTCAGTACACGACAAGNGGACCAATTAGTAAATTAGTCGATAAACCGAGTCAATACAAATCAGCCACAACGGACCAGATAACGCACAAGTAAACAAGGAACAGACATCTTATACAAGCACGANCACACNTAACACGNTGTGTANAACTGCATCCTTACTTACACCCTATAACTATTACAAGCAATACGTCCCTGACAACANGTGCTTGACGATACGTACACGNATAGACACGAACGGAATCCTAAACTGNTGCCAATGCGCGCCGGCTCGNCTGAACATTAAGAGTCCCACAGATAANATCTGGCAACTNACTCGNGNTGNCACATAAGGTTTCCTACCAAGA]




>consensus_8761#2
GCAGAATTGCCCCCGTTAATGCAGATATTGGTCAGCTNCGTCTGCACAGTGTNTGGGAGC
ATTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTT
GGTCAGCTTACTGATATCGTAACAATCATTATCAACATCGATGATACGAGAGTACCAACA
GGTCGTGGTGATAATGTATACGGGACAAAAAACGGTGCGAGTGGCTGTGGCAGAACAGTA
GGATGGGTGTATNATGCGACTTTCANACGGCATGACTGTTGTCACTANGTAGATNGCCGC
TAGTGCTAGTCAGTACACGACAAGNGGACCAATTAGTAAATTAGTCGATAAACCGAGTCA
ATACAAATCAGCCACAACGGACCAGATAACGCACAAGTAAACAAGGAACAGACATCTTAT
ACAAGCACGANCACACNTAACACGNTGTGTANAACTGCATCCTTACTTACACCCTATAAC
TATTACAAGCAATACGTCCCTGACAACANGTGCTTGACGATACGTACACGNATAGACACG
AACGGAATCCTAAACTGNTGCCAATGCGCGCCGGCTCGNCTGAACATTAAGAGTCCCACA
GATAANATCTGGCAACTNACTCGNGNTGNCACATAAGGTTTCCTACCAAGA

consensusID : consensus_8761#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence 
                              [TTCAACGCGAGTGATTACGTTACACATCTTTGTCAAGAAACATTACTGCAGTCTTCACCACCAATGCAATGGGGCGTGAGCTGATTGAAATTTTGGAAGTTCATAGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATCGAACGTCTGTGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAAAACGACTCTGCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGCATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTATACGTGTTCTACCGTGCAAGCACGAGT]

[+] EMBL CNS09KSH             [TTCAACGCGAGTGATTACGTTACACATCTTTGTCAAGAAACATTACTGCAGTCTTCACCACCAATGCAATGGGGCGTGAGCTGATTGAAATTTTGGAAGTTCATAGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATCGAACGTCTGTGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAAAACGACTCTGCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGCATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTATACGTGTTCTACCGTGCAAGCACGAGT]




>consensus_8761#3
TTCAACGCGAGTGATTACGTTACACATCTTTGTCAAGAAACATTACTGCAGTCTTCACCA
CCAATGCAATGGGGCGTGAGCTGATTGAAATTTTGGAAGTTCATAGATCCGTTGTGCAAA
TGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAACATTAATCGAACGTCTG
TGCTGTTTGTTTCAATTTCTTTCATTGTACTTATGATAATTTCCCTGGTTTGGTTAGTAT
TTTACTATGTGCAACGATTCCGGTATTTGCAAACCAAAGACAAACAATCAAAACGACTCT
GCAGTGTCGCAAAGCGGATTATAGCAAAAATCCCTACCAAGAGCATTAAATCAGATGACA
AGGAAATCGATAATGATTGCTGTGCCATTTGCATCGAACCGTATAAAGTAACTGATGTTA
TACGTGTTCTACCGTGCAAGCACGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8761#0      ------------------------------------------------------------
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      GCAGATTCGGCACGNGGACTACTCCTCAATTGCTTCGCACTGAAGAATCATCGAGAAGAG 60
consensus_8761#2      ------------------------------------------------------GCAGAA 6
                                                                                  

consensus_8761#0      ------------------------------------------------------------
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      TTTCCTGGTCCACTGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGACGGGAGCA 120
consensus_8761#2      TTGCCC---CCGTTAATGCAGATATTGGTC-AGCTNCGTCTGC-ACAGTGTNTGGGAGCA 61
                                                                                  

consensus_8761#0      ----------------------------------------------------------CC 2
consensus_8761#3      -----------TTCAACGCGAGTGATTACGTTACACATCTTTGTCAAGAAACATTACTGC 49
consensus_8761#1      TTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCAC-TTCCGTT 179
consensus_8761#2      TTCCAACGACGCTCTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCAC-TTCCGTT 120
                                                                                  

consensus_8761#0      GGTT--CTAGATCGCGATCTA----GAACTAGGCTG-ATTGA-AATTTTGGAAGT-TCAT 53
consensus_8761#3      AGTC--TTCACCACCAATGCAATGGGGCGTGAGCTG-ATTGA-AATTTTGGAAGT-TCAT 104
consensus_8761#1      GGTCAGCTTACTGATATCGTAACA-ATCATTATCAACATCGATGATAACGAGAGT-CCAA 237
consensus_8761#2      GGTCAGCTTACTGATATCGTAACA-ATCATTATCAACATCGATGATA-CGAGAGTACCAA 178
                       **    *            *        *   *   ** **  **   *  ***  ** 

consensus_8761#0      AGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAAC 113
consensus_8761#3      AGATCCGTTGTGCAAATGCGCATAATTGAGGGATCTCGTCAGTTCCGCAACCTAGGAAAC 164
consensus_8761#1      CAGGTCGTGGTGATACTGT-TACGGGC--AGTAGCGGTGCGA----GTGGCGGTGGCAGC 290
consensus_8761#2      CAGGTCGTGGTGATAATGTATACGGGACAAAAAACGGTGCGA----GTGGCTGTGGCAG- 233
                           *** ***  * **   *          * *    *      *   *   ** *  

consensus_8761#0      ATTAATCGAACGTCTGTGCTGTTTG---TTTCAATTTCTT--TCATTGTACTTATGATAA 168
consensus_8761#3      ATTAATCGAACGTCTGTGCTGTTTG---TTTCAATTTCTT--TCATTGTACTTATGATAA 219
consensus_8761#1      AACAGTAGGATGGGTGTATTATGCGATCTTTCAACG-CATGAC-GTTGTAAAT-TGTAG- 346
consensus_8761#2      AACAGTAGGATGGGTGTATNATGCGACTTTCANACGGCATGACTGTTGTCACTANGTAGA 293
                      *  * * * * *  ***    *  *   **   *   * *     ****   *  *    

consensus_8761#0      TTTCC-CTGGT-TTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAA 226
consensus_8761#3      TTTCC-CTGGT-TTGGTTAGTATTTTACTATGTGCAACGATTCCGGTATTTGCAAACCAA 277
consensus_8761#1      -TAGCGCTAGTGCTAGT-AGTA-ACGAC-AGGGACAATAGT-----AATTG--TGATAAC 395
consensus_8761#2      TNGCCGCTAGTGCTAGTCAGTACACGAC-AAGNGGACCAATTAGTAAATTAGTCGATAAA 352
                          * ** **  * ** ****    ** * *   *    *      ***     *  * 

consensus_8761#0      ---AGACAA-ACAA-TCAA-AACGACTCTGCAG-TGTCGCAAAGCGGATTATAGCAAAAA 279
consensus_8761#3      ---AGACAA-ACAA-TCAA-AACGACTCTGCAG-TGTCGCAAAGCGGATTATAGCAAAAA 330
consensus_8761#1      ----GGTAATACAA-TCAGCAACGACAG------TAACGAA--AGTAAC--AGCGACAGC 440
consensus_8761#2      CCGAGTCAATACAAATCAGCCACAACGGACCAGATAACGCACAAGTAAACAAGGAACAGA 412
                          *  ** **** ***   ** **        *  ** *      *       * *  

consensus_8761#0      TCCCTACCAAGAGTATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTT 339
consensus_8761#3      TCCCTACCAAGAGCATTAAATCAGATGACAAGGAAATCGATAATGATTGCTGTGCCATTT 390
consensus_8761#1      CATCTTATA--AGCAGAAAAA----TAACA--GATGTGTAAA--TGCATC-TTAATAACA 489
consensus_8761#2      CATCTTATACAAGCACGANCACACNTAACAC-GNTGTGTANAACTGCATCCTTACTTACA 471
                         **   *  ** *  *       * ***  *   *  * *       *  *       

consensus_8761#0      GCATCGAACCGTATAAAGTAACTGATGTT-----ATACGTGTTCTACCGTGCAAGCACGA 394
consensus_8761#3      GCATCGAACCGTATAAAGTAACTGATGTT-----ATACGTGTTCTACCGTGCAAGCACGA 445
consensus_8761#1      ---TATA-CTATTT--AGTAATAG--TCCTGA-AACAA-TGCTTGACGATGTTAACA--- 536
consensus_8761#2      CCCTATAACTATTACAAGCAATACGTCCCTGACAACANGTGCTTGACGATACGTACACGN 531
                         *  * *  *    ** **             * *  ** *  **  *     **   

consensus_8761#0      GTTCCATAAGGTCTGCATAGATCCATGGCTACTTGAGCATCGTACCTGCCCAATGTGCAA 454
consensus_8761#3      GT---------------------------------------------------------- 447
consensus_8761#1      ATGAA---GAAGGCAATCCTAAACTGT-GCCA-TGCGAGCCGGCTCGTCTGA-CATTAGA 590
consensus_8761#2      ATAGACACGAACGGAATCCTAAACTGNTGCCAATGCGCGCCGGCTCGNCTGAACATTAAG 591
                       *                                                          

consensus_8761#0      AATGGACATTCTGAAGCATTATGGCTTTGTGGTGGGTTCTTCCTCATCTTCTCAAATCAA 514
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      GTCCACGTAGGTCTGGAATTATTGGTGTGTTCACTAAGTTTCTTCAGTGGTGGTGATTAA 650
consensus_8761#2      AGTCCCACAGAT----AANATCTGGCA-ACTNACTCGNGNTGNCACATAA-GGTTTCCTA 645
                                                                                  

consensus_8761#0      TTCAGCGATCGCAGAATATCTAAATGTTGCCCCACCGCCACCGCCCTCTAATACGTCTAC 574
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      CCTTGGATT--------------------------------------------------- 659
consensus_8761#2      CCAAGA------------------------------------------------------ 651
                                                                                  

consensus_8761#0      CATCACTACCTCCTCAATTGCTTCGACTGAAGAATCATCGAGAAGAGTTTCCTGGTCCAC 634
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TGGGGCAGATATGGGTCCAGCTACGTCTGCCACAGTGGATGGGAGCATTCCAACGACGCT 694
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CTTTGGTAATGATTACGTTGCCGGTCGCAATGGTGGCACTTCCGTTGGTCAGCTTACTGA 754
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TATCGTAACAATCATTATCAACATCGATGATAACGAGAGTCCAACAGGTCGTGGTGATAC 814
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TGTTACGGGCAGTAGCGGTGCGAGTGGCGGTGGCAGCAACAGTAGGATGGGTGTATTATG 874
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CGATCTTTCAACGCATGACGTTGTAAATTGTAGTAGCGCTAGTGCTAGTAGTAACGACAG 934
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      GGACAATAGTAATTGTGATAACGGTAATACAATCAGCAACGACAGTAACGAAAGTAACAG 994
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CGACAGCCATCTTATAAGCAGAAAAATAACAGATGTGTAAATGCATCTTAATAACATATA 1054
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CTATTTAGTAATAGTCCTGAAACAATGCTTGACGATAGTTAACGATGAAGAAGGCAATCC 1114
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TAAACTGTGCCATGCGAGCCGGCTCGTCTGACATTAGAGTCCACGTAGTCTGGAATTATT 1174
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      GTGTGTTCACTAGTTTCTTCAGTTGTGTGATTAACTGGATAAACTTAAATGATTGATACA 1234
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CAATCAAATGAACAGACCATTAACATTGTAACATACGTCGAGTGAAATTAATTCGTAAAT 1294
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TTCGCCTAAAATAGACCAGCGACCCGTAATAATCGCGTATTAAAACTTAATTGTTTAACC 1354
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      GTGTAAGATTCTGTGATACAAACTTGAGACATAAATATGATAATTTTGTCACTATCGTAA 1414
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TCGAACTCATTCAGCTTCCGTCAGCGCTGTTATTTGAAACGATGCTACTATTACTAATTA 1474
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      CTATTGATCCCGTCTTAGCTGTAGAGTTAAACAGGCGCAGCTGAAATGGTGATGAGATAC 1534
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      AGACTAAGAGATAGAAAGAAAAATAAAAGAGAGAAAGAAATACAAAAAGGAAATGAACGA 1594
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      TTTATAGAAAAAAGATAAGGATAAATAGAGCTGAAAGAAAGAGAAAGAAAAGAAGACGTA 1654
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      AAGATAGAAAAGGAGAACGAGAGAGTTGGACGGACAGATTAAAGTAGCAGGACAATCAAA 1714
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      GAATATCCTTATTTTTTCGGTATCCCACCATATTACAAGGGTACAGCATTATGGTAATAC 1774
consensus_8761#3      ------------------------------------------------------------
consensus_8761#1      ------------------------------------------------------------
consensus_8761#2      ------------------------------------------------------------
                                                                                  

consensus_8761#0      ACGAACGTTTGGGCATAGGCGGAATATCATAGA 1807
consensus_8761#3      ---------------------------------
consensus_8761#1      ---------------------------------
consensus_8761#2      ---------------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)