cluster # 8780

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Anopheles gambiae
cluster # 8780 cluster # 8780 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8780#0 length = 1029 sequences # 7

consensus_8780#1 length = 675 sequences # 2
consensus_8780#2 length = 666 sequences # 3

consensusID : consensus_8780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1029
fasta sequence

                              [CCGCACAAAAGCAAACACGATC--GC-AAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC-TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG-AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGG-TGACGCTCTACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTT-TATAAAAATATGAAATATGAAATAAAGGATTTAATTTTGTTTGTTCCATGAAAAAAAAAAAAAAAAAAAGGCCACATGTG]

[+] EMBL BM602801             [CCGCACAAAAGCAAACACGATCAAGC AAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGGAAAATGATTGAGCGAGCTAGCGGCTATGCTATC                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09NEC             [                  GAGC  GCGAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAA CTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGAAAAATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGGCTGACGCT                                                                                                                                   ]
[+] EMBL CNS09AUR             [                                         GCAGTGCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGC GCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGTGGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAA CATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCG                                                                                                                                                            ]
[-] EMBL CNS09BUX             [                                             TCCGTTGTGTACGACGCAATTAAAGAACTGTGTGGAACAAGTTAGGCATTCCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTTATATACGATTTACTGCACCAGCGCCAAAACAT   CAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGAACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGAAATTCACCCCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTTACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTTTGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATTATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGGGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGG TGACGCTCTACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTT TATAAAAATATGAAATATGcacaacccg                                                    ]
[+] EMBL CNS09BUW             [                                                             CAATTAAA CACTGTGTGGAA AAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGC GCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACAT   CAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAA CTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGGCTGACGCTCTACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTT TATAAAAATATGAAATATGAAATAAAGGATTTAATTTTGTTTGTTCCATGAAAAAAAAAAAAAAAAAAAGGCCACATGTG]
[-] EMBL CNS09NED             [                                                                                                                                                         ATGCCTTATATATTTTTTTCTGCACCAGCGCCAAAACTTCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGAACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACCCCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATTACAAGCTCACCGACGAAACGATCGTGAAGGAGC TGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATTATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGAGCTGAAGGGGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGG TGACGCTCTACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTTGTATAAAAATATGAAATATGAAATAAAGGATTTAATTTTG TTGGTGCATGAAA                           ]
[-] EMBL CNS09AUS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGCGTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGG AAATGATTGAGCGAGCTAGCGGCTATG TATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATTATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGGGGCTGAAGGGGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGG TGACGCTCTACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTT TATAAAAATATGAAATATGAAATAAAGGATTTAAT                                             ]




>consensus_8780#0
CCGCACAAAAGCAAACACGATCGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCA
ATTAAAGCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACAA
TACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCG
CCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTT
TCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCG
AAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTG
AAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCG
AAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCG
TGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTAT
GACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACG
ATCGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTG
GAAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATC
GTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATC
CAGGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAA
TTCAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGGTGACGCTC
TACTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTTTATAAAAATAT
GAAATATGAAATAAAGGATTTAATTTTGTTTGTTCCATGAAAAAAAAAAAAAAAAAAAGG
CCACATGTG

consensusID : consensus_8780#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence

                              [CCGCGGACGCGTGGGTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGGAAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGG]

[+] EMBL BM597221             [CCGCGGACGCGTGGGTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGGAAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCAGG]
[+] EMBL BM603936             [                                                                                                                                                                                                 GATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACTTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAA                                                                                                                                               ]




>consensus_8780#1
CCGCGGACGCGTGGGTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCA
CTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAG
GTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGG
ACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACG
CCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACA
CCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGC
TGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCT
TGAAGGATTATGACGATTTCCGTACGAAGCTGGTGGAGGAGTTCCGCTATAACAAGCTCA
CCGACGAAACGATCGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAAC
GGTATGTGCTGGAAATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGG
TGGACATCATCGTCGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGG
CAAAAACTATCCAGG

consensusID : consensus_8780#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 666
fasta sequence

                              [CCGCGATCAAGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCTAATTCAATCCGGTGTATCCAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGGAAGGATTATGACGATTTCCGTACGAAGCTGGGGGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAG]

[+] EMBL BM606991             [CCGCGATCAAGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTGTGTGGAACAAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCTAATTCAATCCGGTGTATCCAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGGAAGGATTATGACGATTTCCGTACGAAGCTGGGGGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATCGTGAAG]
[+] EMBL BM616616             [                                      ccgCGACGCAATTAAAGCACTGTGTGG   AAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCAAATTCAATCCGGTGTATCTAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGGTTCACTGCACCAGCACCAACA      CAGCAGCAGCATCAGCAGCAG   TACGATGAGGGAGATGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGGTCGGGCAGGCAAAACCGTTCGACACCACGCGCGTGAAAGCACTGGTCCAACCGTCCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATA                                                                                                                                                                                   ]
[+] EMBL BM629952             [                                                   ccgGCACTGTGTGGAACAAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCTAATTCAATCCGGTGTATCCAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTGCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCGAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATAGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTGGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCT GGTCGCCGCGTGCGGGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTT GAAGGATTATGACGATTTCCGTACGAAGCT GGTGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATC      ]




>consensus_8780#2
CCGCGATCAAGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTG
TGTGGAACAAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCTAATT
CAATCCGGTGTATCCAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACAATACCTG
CGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAACA
CATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTCG
AGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGATA
GCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGCA
CTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCTG
GAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGGTCGCCGCGTGCGG
GCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGGAAGGATTATGACG
ATTTCCGTACGAAGCTGGGGGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGATC
GTGAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8780#0      ------------------------------------------------------CCGCAC 6
consensus_8780#1      ------------------------------------------------------------
consensus_8780#2      CCGCGATCAAGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAAGCACTG 60
                                                                                  

consensus_8780#0      AAAAGCAAACACGATCGCAAGCAGCGCTGGATGCAGTCCGTTGTGTACGACGCAATTAAA 66
consensus_8780#1      ------------------------------------------------------------
consensus_8780#2      TGTGGAACAAGTTAGGGTAAAATGTGCATTACAACAGAATTGATGATTCAATCGCTAATT 120
                                                                                  

consensus_8780#0      GCACTGTGTGGAACAAGTTAGGCATCGCTAACGCCGGAGCAGATTCGAGAACA-ATACCT 125
consensus_8780#1      --------------------------------------------CCGCGGACGCGTGGGT 16
consensus_8780#2      CAATCCGGTGTATCCAACGCAGCATCGCTAACGCCGGAGCAGATTCGAGAACA-ATACCT 179
                                                                   ** * **   *   *

consensus_8780#0      GCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAAC 185
consensus_8780#1      GCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAAC 76
consensus_8780#2      GCGCACGCAGCACGCTGAACCAAGCATGCCTAATATACGATTCACTGCACCAGCGCCAAC 239
                      ************************************************************

consensus_8780#0      ACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTC 245
consensus_8780#1      ACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTC 136
consensus_8780#2      ACATCAGCAGCAGCAGCAGCAGCAGCAGCAATCCGATGAGGAAGGTGCCTCGCTTTCCTC 299
                      ************************************************************

consensus_8780#0      GAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGAT 305
consensus_8780#1      GAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGAT 196
consensus_8780#2      GAGCAAAGACGGTTTGCTGACCAAGCTGTACCAGGAAAACCAGGACATGAAGGCGAAGAT 359
                      ************************************************************

consensus_8780#0      AGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGC 365
consensus_8780#1      AGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGC 256
consensus_8780#2      AGCCGAGCTGGAGGGTATGATCGGGCAGGCAAAGCCGTTCGACGCCACGCACGTGAAAGC 419
                      ************************************************************

consensus_8780#0      ACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCT 425
consensus_8780#1      ACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCT 316
consensus_8780#2      ACTGGTCCAGCCGTTCAGCGGTGACGATCTGATGGACATTCACACCTGGCTCGCGAAGCT 479
                      ************************************************************

consensus_8780#0      GGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGG-TCGCCGCGTGCG 484
consensus_8780#1      GGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGG-TCGCCGCGTGCG 375
consensus_8780#2      GGAGGATACGTTCCGTGTATTGAAAGCGGGCAAAACCGAGCAGCTGGGTCGCCGCGTGCG 539
                      *********************************************** ************

consensus_8780#0      GGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTG-AAGGATTATGAC 543
consensus_8780#1      GGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTG-AAGGATTATGAC 434
consensus_8780#2      GGCTGCTGACTGGCACTGCGGAAGTTTTTCGGCGAATCACAACCTTGGAAGGATTATGAC 599
                      *********************************************** ************

consensus_8780#0      GATTTCCGTACGAAGCTGGTGG-AGGAGTTCCGCTATAACAAGCTCACCGACGAAACGAT 602
consensus_8780#1      GATTTCCGTACGAAGCTGGTGG-AGGAGTTCCGCTATAACAAGCTCACCGACGAAACGAT 493
consensus_8780#2      GATTTCCGTACGAAGCTGGGGGGAGGAGTTCCGCTATAACAAGCTCACCGACGAAACGAT 659
                      ******************* ** *************************************

consensus_8780#0      CGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGGA 662
consensus_8780#1      CGTGAAGGAGCTGCGGAAGCATATGCTGAAGGATAGCAACGTACAACGGTATGTGCTGGA 553
consensus_8780#2      CGTGAAG----------------------------------------------------- 666
                      *******                                                     

consensus_8780#0      AATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGT 722
consensus_8780#1      AATGATTGAGCGAGCTAGCGGCTATGCTATCGCGGAAATCGACTTGGTGGACATCATCGT 613
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      CGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCA 782
consensus_8780#1      CGACGGATTGAAGGATAATTCGCGCAACGTTGTAATGCTGTACGGGGCAAAAACTATCCA 673
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      GGAGCTGAAGGAGCTGCTGCCCCGGTACATAAAACGAAGAAATGAAAACAAAATATAATT 842
consensus_8780#1      GG---------------------------------------------------------- 675
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      CAGGTGGCGAGATCCGTTCCGAACTTCATGCCGAGCCGTGCGAAGGATGGTGACGCTCTA 902
consensus_8780#1      ------------------------------------------------------------
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      CTCTTCCCCATTTCAAATGAACCAACCTTGTTTTCTTTCTTCCAGTTTATAAAAATATGA 962
consensus_8780#1      ------------------------------------------------------------
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      AATATGAAATAAAGGATTTAATTTTGTTTGTTCCATGAAAAAAAAAAAAAAAAAAAGGCC 1022
consensus_8780#1      ------------------------------------------------------------
consensus_8780#2      ------------------------------------------------------------
                                                                                  

consensus_8780#0      ACATGTG 1029
consensus_8780#1      -------
consensus_8780#2      -------