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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8807#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1489 fasta sequence
[CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTGCTGAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGCTGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCTGCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCATACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCAAGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTTACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGTCCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAGTATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT]
[+] EMBL BM644916 [CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCC ]
[+] EMBL AGA281183 [ GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGG ]
[+] EMBL AGA283436 [ GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGA ]
[+] EMBL BM613104 [ ccgGATGGGGAACTTTACCGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCTGCGTGATTCGCCCCACTTCCTGGAGTTTCTGCAGGGCGACGAGCTGCGCAACGCGTGTCAATTGCTGGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTGCTGAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGCTGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCTGCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCATACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCAAGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTTACAT ]
[-] EMBL AGA284732 [ GTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCAGACGTGTCTGCATCTCTGGTGCCAGCGGGCCCGCGACCGTACCCTGCTGGAGGAGCGGCTGAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGGCCGACCCTTGCCCAGGCCATACACGCGTTGGATCCGCGGGCGGAGACGATCTAACCCCAGCCCAAGCAAGCAAGCAAGCAAG CAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATGAAACCTTTACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGTCCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAGTATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT]
consensusID : consensus_8807#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1023 fasta sequence
[GAATNGCCCCGAGGTTAAATGCGACGCACTTACCTGCTCATACGCGCTTCGTTTCTTTTGCAGACATTTGGCAACGGCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCACGCATACTACCCACGGATACGGCAGCAGCGATAGACAGCCAGTGTCTGGCTGGCTGCCGGCAAAAAGTCGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTGGACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACCCAATATCCTGAAGCTGTACGAATGTGGCCTGCGGAAGGATCAGCCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGAAGGTNGCTGATGGGGCAACTTTACAGGCACGAGCTGATCGGTGAGCGNCAGTNGCCGCGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGCTTGCGGCTAGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGCANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCANACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGCCTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGATGTTGCAATGGCATGACATGACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGCTAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCTGNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATGCNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCCGTGGCTGNCCGGCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG]
[+] EMBL AL930518 [GAATNGCCCCGAGGTTAAATGCGACGCACTTACCTGCTCATACGCGCTTCGTTTCTTTTGCAGACATTTGGCAACGGCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCACGCATACTACCCACGGATACGGCAGCAGCGATAGACAGCCAGTGTCTGGCTGGCTGCCGGCAAAAAGTCGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTGGACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACCCAATATCCTGAAGCTGTACGAATGTGGCCTGCGGAAGGATCAGCCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGAAGGTNGCTGATGGGGCAACTTTACAGGCACGAGCTGATCGGTGAGCGNCAGTNGCCGCGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGCTTGCGGCTAGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGCANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCANACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGCCTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGATGTTGCAATGGCATGACATGACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGCTAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCTGNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATGCNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCCGTGGCTGNCCGGCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG]
consensusID : consensus_8807#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 721 fasta sequence
[AGATCCCGNGGTTAAATTGCGTGAAGCAAGTTCGACTCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGACGCAAAGTGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCTTGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACATTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGATGTCGGCGGCGCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAGAGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGATGGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG]
[+] EMBL AL692630 [AGATCCCGNGGTTAAATTGCGTGAAGCAAGTTCGACTCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGACGCAAAGTGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCTTGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACATTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGATGTCGGCGGCGCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAGAGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGATGGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG]
consensusID : consensus_8807#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTTACAGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCT]
[+] EMBL BM606716 [CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATG ]
[+] EMBL BM650518 [ ccgGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAACGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAGTACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCACTAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCAGCGATAGACAGCCAGTGTCGGCGGCTGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGCCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTTACAGCCGAGCTGATCGGTGAGCGCAGTGCCGCGTTCGAGTGCTTTCTCGACCATATCGTAACCGTGCCTTCGCT]
consensusID : consensus_8807#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[GGGCCGTTCTGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACAATTTCTAAGCAATATTCCATACAGTAATCGTTTAAATGTTTACAGTTGGTGGTTTTGACAAGTGTCCCCATTCCTTTTACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCATCACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCNATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTANAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG]
[+] EMBL BX628030 [GGGCCGTTCTGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACAATTTCTAAGCAATATTCCATACAGTAATCGTTTAAATGTTTACAGTTGGTGGTTTTGACAAGTGTCCCCATTCCTTTTACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCATCACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCNATCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGACATACACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATAAATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAATAAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGCGTANAATGGCCATGGAGAACGGGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG]
consensusID : consensus_8807#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGCAGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCCGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCAGCCGCGCGAGCTGATCGGTGAGCGCAGTGCCAGCGTTNCGAGTGCGTTNCTCGACCATATCGTAANCACGGTGCC]
[+] EMBL BX466516 [GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGCAGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGGCGGCCGCCGGCAAAAAGTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCCGGGCCGGACCCGTACCCGACCAGCGTCGAGCGGCGCTACACCCACTTCCTGAAGCTGTACGAAGGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGACGGTCTGCTTCCCGAAGAAGGTGCTGATGGGGAACTTCAGCCGCGCGAGCTGATCGGTGAGCGCAGTGCCAGCGTTNCGAGTGCGTTNCTCGACCATATCGTAANCACGGTGCC]
consensusID : consensus_8807#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence
[CTTAGGTTAAAAACCCATTTAGTTGGGGTTGTTTTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTAACGCTTGTCGGGGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTACTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGGCAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTTTATAAATAAATTATGGGA]
[-] EMBL BM630340 [CTTAGGTTAAAAACCCATTTAGTTGGGGTTGTTTTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTAACGCTTGTCGGGGTACATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTACTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGGCAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTTTATAAATAAATTATGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 CCGCCCACGCGTCCGCACACATCGGATGCAAGTGGGTGTTGAAGCAAAGCGTTGTCTATA 60
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 -------CCGACTTCCTGCTTTCAGTGCCTGCGAGAATAGATTGCGTGAAGCAAGTTCGA 53
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 AATGGCCCCGATAGCATAGAGTGCAACGTCCCCTCCTCCCACTGCACCGCAAAGCCATTG 120
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 TCCCCAGTTCGGACGGAGGTGGAACAGCTGTGATAGTGCTAGGGAAGCTGCAGGAACGGA 113
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 TTGTTTATGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGG 180
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 CATACACACATCGGATGCAATGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAA 173
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 AATAAAC-CATCCAATCCAGTGCATCCCGTGGTCGTGGGGCGTAGAATGGCCATGGAGAA 239
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ---------------------------GAATNGCCCCGAGGTTAAA---TGCGACGCACT 30
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 CGGGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAG 233
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ---------------------------------------------------GGGCCGTTC 9
consensus_8807#0 CGGGACTGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAG 299
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 TAC-CTGCTCAT------ACGCGCTTCGTTTCTTTTGCA-GACATTTGGCAACGGCC-AC 81
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 TACGTTGAGCATGAAGCAACAAACCAAGGCCACCGTGCAAGACATTTGGCAACGGCCCAC 293
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 TGTGTTATCAGAAATTAAAAATAAACAAGGGATTACACA-ATTTCTAAGCAATATTCCAT 68
consensus_8807#0 TACGTTGAGCATGAAGCAACAAACCAAGGGCACCGTGCAAGACATTTGGCAACGGCCCAC 359
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 TAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATTACCGCTACGCA 141
consensus_8807#5 -----------------------GANNTGAATAGCTCAGGGCACGAATCCGCACGANNGC 37
consensus_8807#3 TAGACGACCGCTGCCGAATGCTGGCGATGTAGTGCTGTGCTTCGAGATT-CCGCT-CGCA 351
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ACAGTAATCGTT--TAAATGTTTACAGT-TGGTGGTTTTGACAAGTGTCCCCATTCCTTT 125
consensus_8807#0 TAGACGACCGCTGCCGAATGCTGGCGATGTGGTGCTGTGCTTCGAGATT-CCGCT-CGCA 417
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 CGCATACTACCCACGGATA-CGGCAGC-AGCGATAGACAGCCAGTGTCTGGCTGGCTGCC 199
consensus_8807#5 AGCATACTACCCACCGGGATCGGCAGCCAGCGATGGACAGCCAGTGTCGG--CGGCCGCC 95
consensus_8807#3 CGCATACTACCCACCGG-ATCGGCAGCCAGCGATGGACAGCCAGTGTCGG--CGGCTGCC 408
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 TACAAATAAGGGAAGCGAAATCACCTTCATCGGTGGTGCATACCCGTGCA--TCACTTCC 183
consensus_8807#0 CGCATACTACCCACCGG-ATCGGCAGCCAGCGATAGACAGCCAGTGTCGG--CGGCTGCC 474
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 GGCAAAAAGT-CGTCATATACGAGGTAAACTGTGCTGTGNAGTGATGGCCCCTGGGCCTG 258
consensus_8807#5 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 149
consensus_8807#3 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 462
consensus_8807#2 ---------A-----GATCCCGNGGTTAAAT----TGCGTGAAGCAAGTTCGACT----- 37
consensus_8807#4 TGCTTTCAGT-----GCCTGCGAGAATAGAT----TGCGTGAAGCAAGTTCNA-T----- 228
consensus_8807#0 GGCAAAAAGTACGTCATATACGAGGTAAACG----TGCGGAAGGATGGCCCCGGG--CCG 528
consensus_8807#6 -------------------CTTAGGTTAAAAA---CCCATTTAGTTGGGGTTGTT----- 33
* * * *
consensus_8807#1 GACCCGTACCCGACAGCNGTCTGAGCGGCTGCTACACC-CAATATCCTGAAGCTGTACGA 317
consensus_8807#5 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 205
consensus_8807#3 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 518
consensus_8807#2 -CCCCAGTTCGGACGGAGGTG-GAACAGCTGTGATA----GTGCTAGGGAAGCTGCAGGA 91
consensus_8807#4 -CCCCAGTTCGGACGGAGGTG-GAACAGCTGTGATA----GTGCTAGGGAAGCTGCAGGA 282
consensus_8807#0 GACCCGTACCCGACCAGCGTC-GAGCGGC-GCTACACC-CACT-TCCTGAAGCTGTACGA 584
consensus_8807#6 ---TTTTTTTAAATTAGTATATTTAATATTTTCATAGGGCAAAACAATGGGGCGCTTTTA 90
* * * * * ** *
consensus_8807#1 ATGTGGCCTGCGGAAGGATCAG-CCGACCAGACTGCAGACTGGTCTGCTATACCCGAAGA 376
consensus_8807#5 A---GGGCTGCGGAAGGATCAGACCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 259
consensus_8807#3 A---GGGCTGCGGAAGGATCAG-CCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 571
consensus_8807#2 A---CGGACATACACACATCGGATGCAAGTGGGTGTTGAC-GCAAAGTGTTGTCTATAAA 147
consensus_8807#4 A---CGGACATACACACATCGGATGCAAGTGGGTGTTGAA-GCAAAGCGTTGTCTATAAA 338
consensus_8807#0 A---GGGCTGCGGAAGGATCAG-CCCGCCCAGCTGCAGAC-GGTCTGCT--TCCCGAAGA 637
consensus_8807#6 A---CGCTTGTCGGGGTA-CATTTGAGTGCCGCGAGCGGGCTTTGCATTTTTTTTTTTTA 146
* * * * * *
consensus_8807#1 AGGTNGCTGATGGGGCAACTT----TACAGGCACGAGCTGATCGGTGAG--CGNCAGTNG 430
consensus_8807#5 AGGTG-CTGATGGGG-AACTT----CAGCCGCGCGAGCTGATCGGTGAG--CGC-AGTGC 310
consensus_8807#3 AGGTG-CTGATGGGG-AACTT----TACAGC--CGAGCTGATCGGTGAG--CGC-AGTG- 619
consensus_8807#2 TGGCC-CCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGT 206
consensus_8807#4 TGGCC-CCGATAGCATAGAGTGCAACGTCCCCTCCCACTGCACCGCAAAGCCATTGTTGT 397
consensus_8807#0 AGGTG-CTGATGGGG-AACTT----CACCGC--CGAGCTGATCGGTGAG--CGC-AGTG- 685
consensus_8807#6 CTTTCGCTATTGGGATCGGGATTGTTGGAGCTATTTGTAGAAGAGAGAATTTTTAGAAGG 206
* * * * * *
consensus_8807#1 CCG-CGTTTCTGAGCTNGCTTCCTCGACCACTATCGTAACCGTGCCTTCGC-TTGCGGCT 488
consensus_8807#5 CAG-CGTTNC-GAGTGCG-TTNCTCGACCA-TATCGTAANCACGGTGCC----------- 355
consensus_8807#3 CCG-CGTTC--GAG--TGCTTTCTCGACCA-TATCGTAACCGTGCCTTCGC-T------- 665
consensus_8807#2 TTA-TGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAAT 265
consensus_8807#4 TTA-TGTTTACGTGTGTGTGATTTTTTCCCTCTCTTCTGCTGTGCCTCTTTGCTGGGAAT 456
consensus_8807#0 CCG-CGTTC--GAG--TGCTTTCTCGACCA-TATCGTAACCGTGCCTTCGCTGCGTGATT 739
consensus_8807#6 CAAACGTTTAACTATCCATTTACTTTTATTTGTCCCAGGCTTGGCCAATTT--TATAAAT 264
*** * *
consensus_8807#1 AGAATATCNACCACAATAATCCCCTGGGCCAGTATATCAGCNNACGAGGCACGCAACAGC 548
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 AAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGC--GTAGAATGGCCTTGGAGAACG 323
consensus_8807#4 AAACCATCCATTCCAGTGCATCCCGTGGTCGTGGGGC--GTANAATGGCCATGGAGAACG 514
consensus_8807#0 CGCCCCACT-TCCTGGAGTTTCTGCAGGGCGACGAGCT-GCGCAACGCGTGTCAATTGCT 797
consensus_8807#6 AAATTATGGGA------------------------------------------------- 275
consensus_8807#1 ANAGCTAGACGGCCACACACGCCGTGTCCANATNTGCCTTGGACGCANNCGGGTCGGCAN 608
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 GGACGGAATCCATCGAGGACGATCTGGATAGCAGCGCGACGGAAGCGTTTGACCAAAACA 383
consensus_8807#4 GGACGGAATCCATCGAGGACGATCTGGATAGCANCGCNACGGAAGCGTTTG--------- 565
consensus_8807#0 GGACGAGCGGCGCAACGAGCTGGCGGTGCCGCTGCTCGAGAACTGCTTCCGGCTG---CT 854
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ACACGGAGGCTTAGGNCNGGTAGCCCAGCCTTGACTCGANAAACNTGCCTTACCGAGNGC 668
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 TTTGGCAACCGGCCCACTAGACGACCGCTGCCGAATACTGGCGATGTANTGCTGTGCTTC 443
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 GAACAAAATCTTTCTGGACAAATCGAAGTGTGTGCTGCTGCTGCTGTGCCGGCTGGTGGC 914
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 CTTGCCTTGGAAACCACACNAACTCCTACTCCTTGAGAGCCAAAAATCCGGAAAGNTGAT 728
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 GAGATTCCGCTCGCACGCATACTACCCACCGGATCGGCAGCCANCGATGGACAGTCAGAT 503
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 TGCCTGCACTACCTCACCGATACCGCACCCGTCCGCGGAACAGTGGGCCGAGCTGGCGCT 974
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 GTTGCAATGGCATGACATG-ACATTGCTGCCCCGGCGGNTGGCNTGGGNCCGCCCCTNGC 787
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 GTCGGCGGCGCGGCAAAAA-GTACGTCATATACGAGGTAAACGTGCGGAAGGATGGCCCC 562
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 GCGCCGGTACGAGCACGTGTGCGATACGGAGCTGCTGGTGCTGTACATTCCGCTGCTGCA 1034
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 TAACAAAACCTTCCACCGGAACTACCCCGGCCACTTCNGGTCCCGGCNTGGGACCCAGCT 847
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 GGGCGGACACCGTACCGACAGANGTCGAGCGGGCTACACCACTTCCTGAAGCTGTACGAG 622
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 GACGTGTCTGCATCTCTGGTGGCAGCGGGGCCGCGACCGTACCTTGCTTGAGGAGCGGCT 1094
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 GNGNGCCCGNANTCCGTGACGCCCTGCGTGCCGCGCGCGTACCGCNGCGAACCGCTGATG 907
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 AGGGCTGCGGAAGGATCAGCCGCCCANCTGCAGACGGTCTGTTCCCGAAGAAGTGCTGAT 682
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 GAGCGAGATGGGCAAGAAGGGTATCAAGGTGAAGGGTGGACCGACCCTTGCCCAGGCCAT 1154
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 CNGCACCTCCCGGTCGCCTGCNTGNCTGTCCTGGTACCCATTCCCGCC-GTGGCTGNCCG 966
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 GGGGAAATTTACGCGAGCTGATCGGTGAGACGCAGGCGG--------------------- 721
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 ACACGCGTTGGATCCACGGGCGGAGACGATCTAACCCCAACCCAAGCAAGCAAGCAAGCA 1214
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 GCCCTNTGTCCNGGCCNACTCNTGTGCTGTCGCCGCCCGCGCCCCCGCCACGCGNAG--- 1023
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 AGCATACAAACCAACAAAAAGCAATTTTGCAAATGATCATCACAAGTGCATCAAACCTTT 1274
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 ACATCACACAAACGATGAGACTAAGCTTTTCCATCTGTTTTTCGTTGTAATTTTATTCGT 1334
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 CCGTCTTAGGTTAAAAACACATTTAGTTGGGGTTGTTTTTTTTTTATTTAGTATATTTAG 1394
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 ------------------------------------------------------------
consensus_8807#5 ------------------------------------------------------------
consensus_8807#3 ------------------------------------------------------------
consensus_8807#2 ------------------------------------------------------------
consensus_8807#4 ------------------------------------------------------------
consensus_8807#0 TATTTTCATAGTGCAAAAAGGGTGCGCTTTTAACGCTTGTCGGCGTACATTTGAGTGCCG 1454
consensus_8807#6 ------------------------------------------------------------
consensus_8807#1 -----------------------------------
consensus_8807#5 -----------------------------------
consensus_8807#3 -----------------------------------
consensus_8807#2 -----------------------------------
consensus_8807#4 -----------------------------------
consensus_8807#0 CGAGCGGGCTTTGCATTTTTTTTTACTTTCGCAAT 1489
consensus_8807#6 -----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||