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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1111 fasta sequence
[AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA-AGGATCCA-ATAGCCCCAC-TTGCTATGCTAGCTG-TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC-A-AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT]
[+] EMBL CNS097TC [AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTTTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTTTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTTTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATTTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTTTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTAAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTG ]
[+] EMBL CNS09NPL [ ttTTTTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGGCGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCCCAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCCCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAACCCTATGTTGCAGTTTGAATGCGGTTCCCCAATGTATATGAG ]
[-] EMBL BM613492 [ CTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAcgg ]
[-] EMBL CNS097TB [ CCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTA AGGATCCA ATAGCCCCAC TTGCTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC ATAGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT]
[+] EMBL CNS09PO9 [ GATGATTAACACTACAGGATCCACATAGCCCCACTTTGCTATGCTAGCTGTTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCAGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTTATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTT ]
[-] EMBL CNS09NPK [ CTATGCTAGCTG TTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAA AGC GCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAata ]
[-] EMBL BX628737 [ AGGCAAATATGACCCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACC A AGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAACTAATTTTCGTAACTG ]
consensusID : consensus_8855#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 945 fasta sequence
[ATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG]
[-] EMBL CNS09PO8 [ATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTTGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG]
consensusID : consensus_8855#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence
[GCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGGCAATGTTAGTGCTGAACATAACCTTTTGAATTAGTTTTTTTAAATTCGACCGG]
[-] EMBL BM634126 [GCGGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAGAATCTCCTATTTTAACCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTATATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTGTTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAGCACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAAATCTATTCGCCTCCTTCCGGAATGTCGAGCTAGGAACTTGTAGAATCCGATTACACGTGTAGCAGGATAGGCAGCGAACGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCAACATACAACATACATAATTTGCAGGAGAGTCAAGACATGTCATTTTAACATTGAAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGGCAATGTTAGTGCTGAACATAACCTTTTGAATTAGTTTTTTTAAATTCGACCGG]
consensusID : consensus_8855#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[AAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGAAAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTCGTCAACTCCTATGTGCATGCAATATATCTCATTTTGTACACGATTTGAAACATTGCGACACATGTGTTGTGTCAAATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTGAACATAACTTTAGATGCTTAAGTATTGATTAAACATAATTTGTCTATGGTGGAAGAATTACACAAAATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTTAACCGT]
[-] EMBL BX614930 [AAAATTATTTACTGGTTTTAAATTCTTCATTCATTTAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAATGGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCTACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGAAAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTCGTCAACTCCTATGTGCATGCAATATATCTCATTTTGTACACGATTTGAAACATTGCGACACATGTGTTGTGTCAAATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTGAACATAACTTTAGATGCTTAAGTATTGATTAAACATAATTTGTCTATGGTGGAAGAATTACACAAAATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTTAACCGT]
consensusID : consensus_8855#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[ATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGATGATCATTCGTTTCGGCTATTTTATTTCACATTCCATGTCTACTCCGGAAACACCATCTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCTTATAAAACATAACTTTTAAAACAAATTTAAAACATAAAACATATCTTTCAAATATTGTCATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG]
[-] EMBL BM623390 [ATATTGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGATGATCATTCGTTTCGGCTATTTTATTTCACATTCCATGTCTACTCCGGAAACACCATCTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCTTATAAAACATAACTTTTAAAACAAATTTAAAACATAAAACATATCTTTCAAATATTGTCATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTTCTACAAATAATTTTCGTAACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG]
consensusID : consensus_8855#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 542 fasta sequence
[GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTACATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCACGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAGTCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGATGATCATTCGTTTCTGACNCTCGTGNGGGATTC]
[-] EMBL BX466096 [GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTACATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCACGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAGTCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCAAAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCACCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACCTACAAATTCAACATCAATCCAAGCCACTTTTTCCCTGCACAATCATTCCTTCGAATGCAATTCTAGTAAAAGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGATGATCATTCGTTTCTGACNCTCGTGNGGGATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8855#1 ------------------------------------------------------------
consensus_8855#2 ------------------------------------------------------------
consensus_8855#0 AAATTCTGATTTTTATTCAAACTTAAAATTATTTACTGGTTTTAAATTCTTCATTCATTT 60
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 ----------------------------------------------------------AT 2
consensus_8855#2 ------------------------------------------------------------
consensus_8855#0 AATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCCAAAT 120
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 GGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCT 62
consensus_8855#2 ------------------------------------------------------------
consensus_8855#0 GGACGAAGTAATCTTTCACTATGCACAACATGTACAACACCGGGAGAGTCTACCATATCT 180
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 ACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACAC 122
consensus_8855#2 ------------------------------------------------------------
consensus_8855#0 ACACTAGTTTCCTTGTCAATCCATTTACGTTGCTGATGTCTTCGAACACACCAACAACAC 240
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 ------------------GNGCAGTCGAACCGAGAGATACTCCATTCGTTTGTCTTAGTA 42
consensus_8855#1 CAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCT 182
consensus_8855#2 ------------------------------------------------------------
consensus_8855#0 CAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACTTGCTATGCTAGCTGTTTCT 300
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 CATGGTTGAACTGATTTTCATGTAACGCTNTTTCNGACATGACAACATACATNATTTGCA 102
consensus_8855#1 AGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGC 242
consensus_8855#2 ----------------------------------------------------------GC 2
consensus_8855#0 AGCATAACTCTTGGACGAGTAGGCAAATATGAACCATCAAGATCTTTATATTCGCAACGC 360
consensus_8855#3 ------------------------------------------------------------
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 CGGAGAGTCAAGACATGTCATTCTTACACATTGGCAAACGTTACAAATCCTATGTTGCAG 162
consensus_8855#1 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 300
consensus_8855#2 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 60
consensus_8855#0 GGTCCCATATAACCATCAGCACATTCGCAGTTGTATAATAAAG--AATCTCCTATTTTAA 418
consensus_8855#3 --------------------------AAAATTATTTACTGGTTTTAAATTCTTCATTCAT 34
consensus_8855#4 ------------------------------------------------------------
consensus_8855#5 TCTTGAATGCGGTTCCACAATGTATATGAGTTCAAAGCCATTCACATTCACAGATCTCAA 222
consensus_8855#1 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAGAGCGCATACGCTGGAGGGCATTTAT 360
consensus_8855#2 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCCGCATACGCTGGAGGGCATTTAT 120
consensus_8855#0 CCGTAAAACAGGTGGCGTCGTTAAGGCAATACCAAGCAGCATACGCTGGAGGGCATTTAT 478
consensus_8855#3 T--TAATTCGTATCACTTCAATGAGTCGCTCATAGGTATCGTTTTAAGATGATGAATTCC 92
consensus_8855#4 -----------------------------ATATTGTTGTTTGTTTATAATATTCA-TTCA 30
consensus_8855#5 AACAATGTTCGACAACTTTTGTTTGCAGCATATTGTTGTTTGTTTATAATATTCAGTTCA 282
* **
consensus_8855#1 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 420
consensus_8855#2 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 180
consensus_8855#0 ATGTATGAAAAGTAATATTGGGCCTATTTGTAGGACTGGGAGGACGAGGCTTTGGTGTTG 538
consensus_8855#3 AAATGGACGAAGTAATCTT---TCACTATGCACAACATGTACAACACCGGGAGAGT-CTA 148
consensus_8855#4 AAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCA 90
consensus_8855#5 AAACTAAAACATTCGTGCGCAATGTTAGTGCTGAACATAACAGATCACCGGACACAGCCA 342
* * * * ** ** *
consensus_8855#1 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 480
consensus_8855#2 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 240
consensus_8855#0 TTCTACTTGAACAAGCATCTGTCATCGGAAAATAAAAGTTCAAACTAATAAATATCATAG 598
consensus_8855#3 CCATATCTACACTAGTTTCC-TTGTCAATCCATTTACGTT-------GCTGATGTCTTCG 200
consensus_8855#4 CCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACC 150
consensus_8855#5 CCAAAAATCGATCACAATTCATGTTTCTTATCGTTTTGTCGTTATTCCTAGATTTACACC 402
* * * * * * * ** ** *
consensus_8855#1 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 539
consensus_8855#2 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 299
consensus_8855#0 CACAATACACCAATGTCTTGCTAAATTGTTGAATCATAAA-ATCTATTCGCCTCCTTCCG 657
consensus_8855#3 AACACACCAACAACACCAACCTATGATGATTAACACTAAGGATCCAATAGCCCCACT--- 257
consensus_8855#4 TACAAATT--CAACATCAATCCAAGCCACTTTTTCCCTGC---ACAATCATTCCTTC--- 202
consensus_8855#5 TACAAATT--CAACATCAATCCAAGCCACTTTTTCCCTGC---ACAATCATTCCTTC--- 454
*** *** * * * * * * *
consensus_8855#1 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTTGCAGGATAGGCAGCGAA 598
consensus_8855#2 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTAGCAGGATAGGCAGCGAA 358
consensus_8855#0 GAATGTCGAGCTAGGAACTTGTAGAATC-CGATTACACGTGTTGCAGGATAGGCAGCGAA 716
consensus_8855#3 ---TGCTATGCTAGCTGTTTCTAGCATAACTCTTGGACGAGTAGGCAAATATG-AACCAT 313
consensus_8855#4 GAATGCAATTCTAGTAAA----AGAAGGAGTTGCAGCAAATAGGGCACATCATAGACGAT 258
consensus_8855#5 GAATGCAATTCTAGTAAA----AGAAGGAGTTGCAGCAAATAGGGCACATCNTAGACGAT 510
** **** ** * * ** * *
consensus_8855#1 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 658
consensus_8855#2 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 418
consensus_8855#0 CGAAGATACTCCATTCGTTTGTTTAGACATGGTTGAACTGATTTTCATGTAATGTTTTCA 776
consensus_8855#3 CAAGATCTTTATATTCGCA-ACGCGGTCCCATATAACCATCAGCACATCTAAAATTTTGA 372
consensus_8855#4 ---GATCATTCGTTTCGGCTATTTTATTTCACATT-CCATGTCTACTCCGGAAACACCAT 314
consensus_8855#5 ---GATCATTCGTTTCTGACNCTC-GTGNGGGATT-C----------------------- 542
* *** *
consensus_8855#1 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 711
consensus_8855#2 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 471
consensus_8855#0 ACATACAACATAC-ATAA------TTTGCAGGAGAGTCAAGACATGTCATTTTAACATTG 829
consensus_8855#3 AAGAGTTATATATTATAAGCCGGTCTCGTGGTACAGTC--GTCAACTCCTATGTGCATGC 430
consensus_8855#4 CTAACAAGCACACTAACACATAGACATTCATTGATATGTAGGAAGCGGTATAATCGATCT 374
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 767
consensus_8855#2 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 527
consensus_8855#0 AAAACTTAAAATCCTATGTTGCAGTTTGAATGCGGTTCCACA-ATGTATA---TGAGTTC 885
consensus_8855#3 AATATATCTCATTTTGTAC-ACGATTTGAA-ACATTGCGACACATGTGT----TGTGTCA 484
consensus_8855#4 TATAAAACATAACTTTTAAAACAAATTTAAAACA-TAAAACATATCTTTCAAATATTGTC 433
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 827
consensus_8855#2 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 587
consensus_8855#0 AAAGCCATTCACATTCACAGATCTCAAAACAATGTTCGACAACTTTTGTTTGCAGCATAT 945
consensus_8855#3 AATACCGTACGAAATGAGATATATTGCACACATATACGCCATCGTGTG-----AACATAA 539
consensus_8855#4 ATAGCAAAGCATTGTTGGGTTACATACTCTCAACAAATGTATCATCTGCATAAAGGCGTT 493
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGC-GCAATGTTAGTGCTG 886
consensus_8855#2 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTG--GCAATGTTAGTGCTG 645
consensus_8855#0 TGTTGTTTGTTTATAATATTCATTCAAAACTAAAACATTCGTGC-GCAATGTTAGTGCTG 1004
consensus_8855#3 CTTTAGATGCTTA-AGTATTGATT-AAACATAATTTGTCTATGGTGGAAGAATTACACAA 597
consensus_8855#4 CTACAAATAATTTTCGTAACTGT--ATACACAAATTCTCACTACACCACATACAATAGAA 551
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 AACATAACAATAGAAAAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTCCAG- 945
consensus_8855#2 AACATAACCTTTTGAA-----------TTAGTTTTTTTAAATTCGACCGG---------- 684
consensus_8855#0 AACATAACTCTCAACAAATGTATC--ATCTGCATAAAGGCGTTCTACAAATAATTTTCGT 1062
consensus_8855#3 AATAAAATGTCTGTAAAATGTAAGACGATCGAATTGCCTTGTT-AACCGT---------- 646
consensus_8855#4 AAGAGACGCGTATCAATAGCTTAACATCTGCCTAGATTCTGTACGG-------------- 597
consensus_8855#5 ------------------------------------------------------------
consensus_8855#1 -------------------------------------------------
consensus_8855#2 -------------------------------------------------
consensus_8855#0 AACTGTATACACAAATTCTCACTACACCACATACAATAGAAAAGAGACT 1111
consensus_8855#3 -------------------------------------------------
consensus_8855#4 -------------------------------------------------
consensus_8855#5 -------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||