cluster # 8856

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Anopheles gambiae
cluster # 8856 cluster # 8856 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8856#0 length = 1175 sequences # 10

consensus_8856#1 length = 850 sequences # 1
consensus_8856#2 length = 725 sequences # 1

consensusID : consensus_8856#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1175
fasta sequence

                              [CAAGATCGCCGAGGGTGTCGCAGCGCGGTTCTTGAGTTGTTTTATTTGGTGCCTTTGCTAGTGCTTCAGCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGGCACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGAAGCCTCCAA-CTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACG-AT-CTGCAGC-TAACGCTGC-TGGACGCAGAGAAAGAGGAACATCATCTGCCGTGCGAGTGTCACAAGACGAAGTGTA-TTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTGCCCCGCAC]

[+] EMBL AL930140             [CAAGATCGCCGAGGGTGTCGCAGCGCGGTTCTTGAGTTGTTTTATTTGGTGCCTTTGCTAGTGCTTCAGCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGAGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGCGCCGGCACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAAGGTGTACGCGGTCGAAGCCTCCAA CCTGGCCCGGCTCGCCCGGGCCGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX620418             [                                                              GCTTCAGCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTTGGCGCCGGGACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAAGGTGTACGCGGTCGAAGCCTCCAA CCTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGAAGANCTGAACAGTATCGAGGTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08ZNV             [                                                                     CATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGGCACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGAAGCCTCCAA CTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGTGATGGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08GZQ             [                                                                            aTCACGGA CAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGGCACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGAAGCCTCCAA CTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTTCATCCGCGTCGGAAACACACTGGAAGCAGAGCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACG AT CTGC                                                                                                                                                                     ]
[+] EMBL CNS08N6I             [                                                                                    CCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGGCACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGAAGCCTCCAA CTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGAACCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACG AT CTGCAGC TAACGCTGCTTGGAC                                                                                                                                                  ]
[-] EMBL CNS08N6J             [                                                                                                                                                                                                                                                                                      CGAGCAGGGTGTACGCGGTCGAAGCCTCCAA CTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGTGATAAAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCAACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGAACGCGCGCGAAAAGTTCCTAAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGT TGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACG AT CCCTCGG TAACGCTGC TGGACGCAGAGAAAGAGGAACATCTTCTGCCGTGCGAGTGTCACAAGACGAAGTGTA TTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTCCC      ]
[-] EMBL CNS095NW             [                                                                                                                                                                                                                                                                                                            AGCCTCCAACCTTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCG GTGCTGCGCGAACAGAAATCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGAAGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGTTTCTGCACCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCAGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAAACGAATCGAAGGTACG AT CTGCAGC TAA GCTGC TGGACGCAGAGAAAGAGGAACATCATCTGCCGTGCGAGTGTCACATGACGAAGTGTATTTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTGC       ]
[-] EMBL CNS08GZR             [                                                                                                                                                                                                                                                                                                                          GCCCCGCTCGCCCGGGCTGTGGTGGGAGAGAACCCACTGCAGGCTTTTATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCAACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGAACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGAAACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCC CGTGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCTTCTGCTTTACAACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCTTCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAAAAAACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGTTGACACGCAACAAGGAGACGAATCGAAGGTACG AT  TCCCTCGTAACGCTGC TGGACGCAGAGAAAGAGGAACATCATCTGCCGTGCGAGTGTCACAAGACGAAGTGTA TTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTGCCCCG   ]
[-] EMBL CNS08ZNW             [                                                                                                                                                                                                                                                                                                                                                                                     CGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGT  GCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACGAATACCTC GC TAACGCTGC TGGACGCAGAGAAAGAGGAACATCATCTGCCGTGCGAGTGTCACAAGACGAAGTGTA TTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTGCCCCGCAC]
[+] EMBL BX618365             [                                                                                                                                                                                                                                                                                                                                                                                                                   CGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCTGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTATCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGAAGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGTTTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCAGAC                                                                                                                                                                                                                                                                                     ]




>consensus_8856#0
CAAGATCGCCGAGGGTGTCGCAGCGCGGTTCTTGAGTTGTTTTATTTGGTGCCTTTGCTA
GTGCTTCAGCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGA
GGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAA
AGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGG
CACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGA
AGCCTCCAACTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGT
GATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGA
CATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGT
GCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGGCTCATGTTTCCCGACACGGCCAC
CCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGG
CGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGT
GTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCT
GATGGAGGTAACGACGGACGAGCTGAACAGTATCGAGGTGAAGGATGTGATTGTGGCGTC
GCGGTCCGGCAAGCTGCAGGGATTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGG
TGCGGAGGAGCAGTTGCAGCTTTCCACCAGTCCATCCGCGTCGGAAACACACTGGAAGCA
GACCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGC
CTTCAGTCTGACGATGACACGCAACAAGGAGACGAATCGAAGGTACGATCTGCAGCTAAC
GCTGCTGGACGCAGAGAAAGAGGAACATCATCTGCCGTGCGAGTGTCACAAGACGAAGTG
TATTTTAATGAAGACCCACCTCGAGAAGATGCAGGTGGAAGAGGAGCAGCATTGATCCGG
CACCGCGGAGGCAATAAATATGGGTTGCCCCGCAC

consensusID : consensus_8856#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 850
fasta sequence

                              [TGGAGTGCCCCCCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTTCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGAAGAGCTGAACAGTATCGAGGTGAAGGATGTAAAAAAAGCGTCGCGGTCCGGCAAGCTGCAGGGTTTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTTCATCCGCGTCGGAAACACACTGGAAGCAGAGCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAAACGAATCGAAGGTACGATCTGCAGCTAACGCTGCTGGACGCAGAG]

[+] EMBL CNS08P7U             [TGGAGTGCCCCCCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTTCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTACGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAGCATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAACCGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGAGGTAACGACGGAAGAGCTGAACAGTATCGAGGTGAAGGATGTAAAAAAAGCGTCGCGGTCCGGCAAGCTGCAGGGTTTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTTCATCCGCGTCGGAAACACACTGGAAGCAGAGCGTGATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAAACGAATCGAAGGTACGATCTGCAGCTAACGCTGCTGGACGCAGAG]




>consensus_8856#1
TGGAGTGCCCCCCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTA
CGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCA
GAAAGCGATCCTCGGCAACCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGA
AGTGAGCGAGTTCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCAT
CGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTA
CGCGCGCGACAAGTTCCTCAAACCGAACGGGCTGGTGTTTCCCGACACGGCCACCCTGTA
CGTGGCACCGTGCAGTGTACCGTCGCGGTTCGATCGGTGGGAAAGTCTGTCCGGCGTGAG
CATGCGGTGCTTTGGCCGTGCGCTGCGCGAACAGAACTCGGGCAATCCGGAAGTGTTAAC
CGTCGCGCCGGAGCATCTGCTTTACGACGGGCACATTATAGCGTGGTTCGACCTGATGGA
GGTAACGACGGAAGAGCTGAACAGTATCGAGGTGAAGGATGTAAAAAAAGCGTCGCGGTC
CGGCAAGCTGCAGGGTTTCTGCATCTGGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGA
GGAGCAGTTGCAGCTTTCCACCAGTTCATCCGCGTCGGAAACACACTGGAAGCAGAGCGT
GATCCCGCTGCCGGAAGATGCCTGCGAGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAG
TCTGACGATGACACGCAACAAGGAAACGAATCGAAGGTACGATCTGCAGCTAACGCTGCT
GGACGCAGAG

consensusID : consensus_8856#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 725
fasta sequence

                              [AATGCCCCAGGTTTATCAGCATTGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTTGGCGCCGGGACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGANCAAGTGTACGCGGTCGAAGCCTCCAACCTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTACTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGACTGGTGTTTCCGAAACGGCACCTGTACGTTGGCACCGTGCAGTGTACCGTCNNCGGGTATCGATCGGTGGNGAAAGTCTTGTCCGGCGTGAGCATTGCCGGGTNGCTTTGGGCCGTGCGGCTTGCGCGAACAGAAACTCCGGGCAAATACCGGAAGGTGTACACCCGTCATGCAGCCGGAGCATCTTGNTATAACAAGGGGCACATTATTAGCGTGGTCGAGACCTGAATGAGTAAACGACGGGAGAGCCTGGACCNT]

[+] EMBL AL932779             [AATGCCCCAGGTTTATCAGCATTGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTTGGCGCCGGGACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGANCAAGTGTACGCGGTCGAAGCCTCCAACCTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTACTGCTGCACGAGGGCATGCTCGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGACTGGTGTTTCCGAAACGGCACCTGTACGTTGGCACCGTGCAGTGTACCGTCNNCGGGTATCGATCGGTGGNGAAAGTCTTGTCCGGCGTGAGCATTGCCGGGTNGCTTTGGGCCGTGCGGCTTGCGCGAACAGAAACTCCGGGCAAATACCGGAAGGTGTACACCCGTCATGCAGCCGGAGCATCTTGNTATAACAAGGGGCACATTATTAGCGTGGTCGAGACCTGAATGAGTAAACGACGGGAGAGCCTGGACCNT]




>consensus_8856#2
AATGCCCCAGGTTTATCAGCATTGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCG
ACAGCTACGAGGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAG
CTTACCAGAAAGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATG
TTGGCGCCGGGACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGANCAAGTGTA
CGCGGTCGAAGCCTCCAACCTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACT
GCAGGCTGTGATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGA
ACGGGTCGACATCATCGTGTCCGAGTGGATGGGTTTCTTACTGCTGCACGAGGGCATGCT
CGATTCGGTGCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGACTGGTGTTTCCGA
AACGGCACCTGTACGTTGGCACCGTGCAGTGTACCGTCNNCGGGTATCGATCGGTGGNGA
AAGTCTTGTCCGGCGTGAGCATTGCCGGGTNGCTTTGGGCCGTGCGGCTTGCGCGAACAG
AAACTCCGGGCAAATACCGGAAGGTGTACACCCGTCATGCAGCCGGAGCATCTTGNTATA
ACAAGGGGCACATTATTAGCGTGGTCGAGACCTGAATGAGTAAACGACGGGAGAGCCTGG
ACCNT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8856#0      CAAGATCGCCGAGGGTGTCGCAGCGCGGTTCTTGAGTTGTTTTATTTGGTGCCTTTGCTA 60
consensus_8856#1      -------------------------------------------------------TGG-A 4
consensus_8856#2      --------------------------------------------------AATGCCCCAG 10
                                                                                  

consensus_8856#0      GTGCTTCAGCATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGA 120
consensus_8856#1      GTGCCCCC-CATGGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGA 63
consensus_8856#2      GTTTATCAGCATTGAATTCACGGACCAGATCGATCCGGCCAGCTATTTCGACAGCTACGA 70
                      **    *  *** ***********************************************

consensus_8856#0      GGATCTTAAGGTCCACGAGCTTATGCTTACGGATCTACCGCGGCAGGAAGCGTACCAGAA 180
consensus_8856#1      GGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAA 123
consensus_8856#2      GGATCTTAAGGTCCACGAGCTTATGCTTACGGATCAACCGCGGCAGGAAGCTTACCAGAA 130
                      *********************************** *************** ********

consensus_8856#0      AGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTCGGTGCCGG 240
consensus_8856#1      AGCGATCCTCGGCAACCGGGC--------------------------------------- 144
consensus_8856#2      AGCGATCCTCGGCAACCGGGCCCTGTTCGAGGGCAAAACCGTGCTCGATGTTGGCGCCGG 190
                      *********************                                       

consensus_8856#0      CACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGAGCAGGGTGTACGCGGTCGA 300
consensus_8856#1      ------------------------------------------------------------
consensus_8856#2      GACAGGAATCCTGTCCATCTTCTGCGCACAGGCGGGTGCGANCAAG-TGTACGCGGTCGA 249
                                                                                  

consensus_8856#0      AGCCTCCAACTTGGCCCGGCTCGCCCGGGCTGTGGTGGGAGAGAACCAACTGCAGGCTGT 360
consensus_8856#1      ------------------------------TGTGGTGGAAGAGAACCAACTGCAGGCTGT 174
consensus_8856#2      AGCCTCCAACCTGGCCCGGCTCGCCCGGGCTGTGGTGGAAGAGAACCAACTGCAGGCTGT 309
                                                    ******** *********************

consensus_8856#0      GATAGAAGTGAGCGAGTGCAAGGTGGAAGATTACCAGCTGCCCGAGGGCGAACGGGTCGA 420
consensus_8856#1      GATAGAAGTGAGCGAGTTCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGA 234
consensus_8856#2      GATAGAAGTGAGCGAGTGCAAGGTGGAAGATTTCCAGCTGCCCGAGGGCGAACGGGTCGA 369
                      ***************** ************** ***************************

consensus_8856#0      CATCATCGTGTCCGAGTGGATGGGCTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGT 480
consensus_8856#1      CATCATCGTGTCCGAGTGGATGGGTTTCTTCCTGCTGCACGAGGGCATGCTCGATTCGGT 294
consensus_8856#2      CATCATCGTGTCCGAGTGGATGGGTTTCTTACTGCTGCACGAGGGCATGCTCGATTCGGT 429
                      ************************ ***** *****************************

consensus_8856#0      GCTGTACGCGCGCGACAAGTTCCTCAAACCGAATGGG-CTCATGTTTCCCGACACGGCCA 539
consensus_8856#1      GCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGG-CTGGTGTTTCCCGACACGGCCA 353
consensus_8856#2      GCTGTACGCGCGCGACAAGTTCCTCAAACCGAACGGGACTGGTGTTTCC-GAAACGGCA- 487
                      ********************************* *** **  ******* ** *****  

consensus_8856#0      CCCTGTACGT-GGCACCGTGCAGTGTACCGTCGC--GGT-TCGATCGGTGGG-AAAGTCT 594
consensus_8856#1      CCCTGTACGT-GGCACCGTGCAGTGTACCGTCGC--GGT-TCGATCGGTGGG-AAAGTCT 408
consensus_8856#2      -CCTGTACGTTGGCACCGTGCAGTGTACCGTCNNCGGGTATCGATCGGTGGNGAAAGTCT 546
                       ********* *********************    *** ***********  *******

consensus_8856#0      -GTCCGGCGTGAGCAT----GCGGTGCTTTGG-CCGTGCG--CTGCGCGAACAGAA--CT 644
consensus_8856#1      -GTCCGGCGTGAGCAT----GCGGTGCTTTGG-CCGTGCG--CTGCGCGAACAGAA--CT 458
consensus_8856#2      TGTCCGGCGTGAGCATTGCCGGGTNGCTTTGGGCCGTGCGGCTTGCGCGAACAGAAACTC 606
                       ***************    * *  ******* *******   *************    

consensus_8856#0      CGGGCAA---TCCGGAAGTGT-TAACCGTCGCGC---CGGAGCATCT--GCTTTACGACG 695
consensus_8856#1      CGGGCAA---TCCGGAAGTGT-TAACCGTCGCGC---CGGAGCATCT--GCTTTACGACG 509
consensus_8856#2      CGGGCAAATACCGGAAGGTGTACACCCGTCATGCAGCCGGAGCATCTTGNTATAACAAGG 666
                      *******    * * * ****  * *****  **   **********     * ** * *

consensus_8856#0      GGCACATTAT-AGCGTGGTTC-GACCTGATGGAGGTAACGACGGACGAGC-TGAACAGTA 752
consensus_8856#1      GGCACATTAT-AGCGTGGTTC-GACCTGATGGAGGTAACGACGGAAGAGC-TGAACAGTA 566
consensus_8856#2      GGCACATTATTAGCGTGGTCGAGACCTGAATGAGTAAACGACGGGAGAGCCTGGACCNT- 725
                      ********** ********   *******  ***  ********  **** ** **  * 

consensus_8856#0      TCGAGGTGAAGGATGTGATTGTGGCGTCGCGGTCCGGCAAGCTGCAGGGATTCTGCATCT 812
consensus_8856#1      TCGAGGTGAAGGATGTAAAAAAAGCGTCGCGGTCCGGCAAGCTGCAGGGTTTCTGCATCT 626
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      GGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTC 872
consensus_8856#1      GGTTCGAGTGTACCTTTCCGGGCGATGGTGCGGAGGAGCAGTTGCAGCTTTCCACCAGTT 686
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      CATCCGCGTCGGAAACACACTGGAAGCAGACCGTGATCCCGCTGCCGGAAGATGCCTGCG 932
consensus_8856#1      CATCCGCGTCGGAAACACACTGGAAGCAGAGCGTGATCCCGCTGCCGGAAGATGCCTGCG 746
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      AGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAGA 992
consensus_8856#1      AGGAGCTGGAAGAGCGAGATCCGGTCGCCTTCAGTCTGACGATGACACGCAACAAGGAAA 806
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      CGAATCGAAGGTACGATCTGCAGCTAACGCTGCTGGACGCAGAGAAAGAGGAACATCATC 1052
consensus_8856#1      CGAATCGAAGGTACGATCTGCAGCTAACGCTGCTGGACGCAGAG---------------- 850
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      TGCCGTGCGAGTGTCACAAGACGAAGTGTATTTTAATGAAGACCCACCTCGAGAAGATGC 1112
consensus_8856#1      ------------------------------------------------------------
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      AGGTGGAAGAGGAGCAGCATTGATCCGGCACCGCGGAGGCAATAAATATGGGTTGCCCCG 1172
consensus_8856#1      ------------------------------------------------------------
consensus_8856#2      ------------------------------------------------------------
                                                                                  

consensus_8856#0      CAC 1175
consensus_8856#1      ---
consensus_8856#2      ---