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Anopheles gambiae
cluster # 8882 cluster # 8882       Sequences # 12       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8882#0 length = 2617 sequences # 6  
consensus_8882#1 length = 1019 sequences # 1  
 consensus_8882#2 length = 666 sequences # 2  
consensus_8882#3 length = 460 sequences # 2  
consensus_8882#4 length = 453 sequences # 1  
consensusID : consensus_8882#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2617
fasta sequence 
                              [CCGCAGGCAGCGAGCGACCAAATCCCATCCCATCTACCGGGGGAACACGAGCTTTGGAGTCGAAACGTGCGCGTCTTGGTGTTTATGTGTGTATAAGTGTGCATTTGTTGCATTCCCCGTATGTGCGTCCAACCCGTCCGTACGTGCATCGTGTGCCCGAACGCATTAGTTTTGTGCAAGTGAGTGACCTTTGACCCGTCTGCAAAGGGAATTACGAAAAAGGGTGCAAACACAGCAAACAAAAAACAACCATACTCGCAGCAAAGGAGAAACGACGTCCGGTGACCACAGCTTCCTTTCGCTAATACCGTCACCTTCGTCGCCGTCGTTCCGTTCCAAGATCGCCCCGCAAGATCGCCGTTCACTACCCAGCATCCGTCACTCACGTTGCTAACCAAGGCAGGCTGTTGACAACTTGGCTTGTGACCCTTTTTGGATTCACTCGGCAAGAAAATTGTACATCCTGAAACAGAAGCGTGCACACACACACAAACCCACACAAAAGCAAAATCGATTCGATCCAGTCAACTCAAATCGTAACAATCGTATGCCACACATGTACCTTTGCTCCGAAAGCCGTGCCTGTCGCTGTTGAATTGAATTGAAACAAACAACAAGCTGTAATCAGAAACGAGAACCAGTACACCTCCAGTGCTCATTAGTATCACGTCGGTGAATAGGTGCCTTAAGTAGTGGATAGGTAGTTAGTTTCGTTTACCAAGAAAACGCAGTGCAAGTGTGCCCAAGAACATCTGCAACTAGGCCTCGTCCAATAGGTGCGCCCCTTACCGTCAAATGTATCCGTTTTGCCAGTACGAGCCGTTCTAAGTGCGAACAAGAAACTGTACCATTAGTGACGGGTCGACAGGAACCGCCACACCCGGTCCTACGCCATACAGCCCAGTTTTGAATGTGTACTGCGGGCAGCTGGATTGATTTTGTGTTCATTTTCAACAAAAACTGCTCGAAAAGCGGCAAACCGCGACGAACCAACAACGATCGAACGTATCGTCGCACAGATTTCGATTCCGCGTTGTGTTCGAGCCACTGCTGAGCAATTCGCTGCATAAAGATGCGATCCAGCGCTGTCGGCATGAGCTCCATCCTGATCGTGGCAGTGGTCGTCGTGCTGCTGATGCTGAACGAAAGCCACGCTACCTCTACGCCCAACAGCGATGCCCTGATCAGCCAGCTAACACGCTCGCGCTACTGTGGCCGTCGGCTGACCGAAACGCTAGCCTTCCTCTGCCAGGGACGATATCCGATGCTGACACACTATCGCACAGATTATGTACACGATCAGGCAAACCAGCGAGTAAAGGTGGAGGTGGCCACCCTGCCCGACACACTGCCGCCCGGCTTCCCTTATCCCGGTGCCGGCGTTCATCGGCGCAGTCGGCGCAGTTCCGGCGGTATCTACGATGAGTGCTGCAAGAAGAGCTGCTCCTACGTCGAGCTGCGTGCCTACTGTGATTGAAGCGGAAAACCCGATTGGGATGAGGATGAGATGCGGTTAGGAGGGGGGAAAGCAGTGAAAGCACCCAAAAGGCGGATGTTACGAATCAGGCGCAGAGAGATAGAAAGAGCGAGAGAGAATCAAGGGAAGGAGATATGTAACCGGTAGACCGGTGTGTTTAGCAACTTGTTTACCAATTGCTTGCGTATTATTTCAATCCAGATTACTCTCTTCTATATCTTTTTTTGTTTAATTTGGTATTTTACTCGCCCTCCCCCCGCTTTTCCCAAGAAGTCTCGTCCGGCGTGAGGCGATGTGTAGATCAATTGCTATTATTATTATTACAATTTTTATAGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTTAATTGCTTGCGTGCGTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTTTATGGTTTTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTACGAAGTGCTCACCGTGTTCCGTACCGCTACCATTCGATTTTTGATAGTATGTATGTATTTTTAGTACACGTTTAGTGGGGTGGCGATGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAANGGAATTTAACCGTAGATGATAGCAATTGAACAACACAAACAAACAGAGAAAAAGGTCTTAGAGTGTGAAGCCATCGGATCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTGTGTATGTATTTNTCATTAAGAAAGGCGAAAAAAGACGGTGGTAAAGTGGCGACGATTAGTTTCGTTTATAAAAGCGATCAAGAAAAAAAAACAATTATTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAG]

[+] EMBL BM612725             [CCGCAGGCAGCGAGCGACCAAATCCCATCCCATCTACCGGGGGAACACGAGCTTTGGAGTCGAAACGTGCGCGTCTTGGTGTTTATGTGTGTATAAGTGTGCATTTGTTGCATTCCCCGTATGTGCGTCCAACCCGTCCGTACGTGCATCGTGTGCCCGAACGCATTAGTTTTGTGCAAGTGAGTGACCTTTGACCCGTCTGCAAAGGGAATTACGAAAAAGGGTGCAAACACAGCAAACAAAAAACAACCATACTCGCAGCAAAGGAGAAACGACGTCCGGTGACCACAGCTTCCTTTCGCTAATACCGTCACCTTCGTCGCCGTCGTTCCGTTCCAAGATCGCCCCGCAAGATCGCCGTTCACTACCCAGCATCCGTCACTCACGTTGCTAACCAAGGCAGGCTGTTGACAACTTGGCTTGTGACCCTTTTTGGATTCACTCGGCAAGAAAATTGTACATCCTGAAACAGAAGCGTGCACACACACACAAACCCACACAAAAGCAAAATCGATTCGATCCAGTCAACTCAAATCGTAACAATCGTATGCCACACATGTACCTTTGCTCCGAAAGCCGTGCCTGTCGCTGTTGAATTGAATTGAAACAAACAACAAGCTGTAATCAGAAACGAGAACCAGTACACCTCCAGTGCTCATTAGTATCACGTCGGTGAATAGGTGCCTTAAGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM577466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgTTGAAACAAACAACAAGCTGTAATCAGAAACGAGAACCAGTACACCTCCAGTGCTCATTAGTATCACGTCGGTGAATAGGTGCCTTAAGTAGTGGATAGGTAGTTAGTTTCGTTTACCAAGAAAACGCAGTGCAAGTGTGCCCAAGAACATCTGCAACTAGGCCTCGTCCAATAGGTGCGCCCCTTACCGTCAAATGTATCCGTTTTGCCAGTACGAGCCGTTCTAAGTGCGAACAAGAAACTGTACCATTAGTGACGGGTCGACAGGAACCGCCACACCCGGTCCTACGCCATACAGCCCAGTTTTGAATGTGTACTGCGGGCAGCTGGATTGATTTTGTGTTCATTTTCAACAAAAACTGCTCGAAAAGCGGCAAACCGCGACGAACCAACAACGATCGAACGTATCGTCGCACAGATTTCGATTCCGCGTTGTGTTCGAGCCACTGCTGAGCAATTCGCTGCATAAAGATGCGATCCAGCGCTGTCGGCATGAGCTCCATCCTGATCGTGGCAGTGGTCGTCGTGCTGCTGATGCTGAACGAAAGCCACGCTACCTCTACGCCCAACAGCGATGCCCTGATCAGCCAGCTAACACGCTCGCGCTACTGTGGCCGTCGGCTGACCGAAACGCTAGCCTTCCTCTGCCAGGGACGATATCCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM638846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cgtccgGTGACGGGTCGACAGGAACCACCGCACCCGGTCCTACGCC TACAGCCCGGTTTTGAATGTGTACTGCGGGCAGCTGGATTGATTTTGTGTTCATTTTTAACAAAAACTGCTCGAAAAGCGGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM635354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgGCGATCCAGCGCTGTCGGCATGAGCTCCATCCTGATCGTGGCAGTGGTCGTCGTGCTGCTGATGCTGAACGAAAGCCACGCTACCTCTACGCCCAACAGCGATGCCCTGATCAGCCAGCTAACACGCTCGCGCTACTGTGGCCGTCGGCTGACCGAAACGCTAGCCTTCCTCTGCCAGGGACGATATCCGATGCTGACACACTATCGCACAGATTATGTACACGATCAGGCAAACCAGCGAGTAAAGGTGGAGGTGGCCACCCTGCCCGACACACTGCCGCCCGGCTTCCCTTATCCCGGTGCCGGCGTTCATCGGCGCAGTCGGCGCAGTTCCGGCGGTATCTACGATGAGTGCTGCAAGAAGAGCTGCTCCTACGTCGAGCTGCGTGCCTACTGTGATTGAAGCGGAAAACCCGATTGGGATGAGGATGAGATGCGGTTAGGAGGGGGGAAAGCAGTGAAAGCACCCAAAAGGCGGATGTTACGAATCAGGCGCAGAGAGATAGAAAGAGCGAGAGAGAATCAAGGGAAGGAGATATGTAACCGGTAGACCGGTGTGTTTAGCAACTTGTTTACCAATTGCTTGCGTATTATTTCAATCCAGATTACTCTCTTCTATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGGTAGACCGGTGTGTTTAGCAACTTGTTTACCAATTGCTTGCGTATTA TTCAATCCAGTTTACTCTCTTCTATATCTTTTTTTGTTTAATTTGGTATTTTACTCGCCCTCCCCCCGCTTTTCCCAAGAAGTCTCGTCCGGCGTGAGGCGATGTGTAGATCAATTGCTATTATTATTATTACAATTTTTATAGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTTAATTGCTTGCGTGCGTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTTTATGGTTTTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTACGAAGTGCTCACCGTGTTCCGTACCGCTACCATTCGATTTTTGATAGTATGTATGTATTTTTAGTACACGTTTAGTGGGGTGGCGATGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAANGGAATTTAACCGTAGATGATA                                                                                                                                                                                                                                                                       ]
[+] EMBL AGA281255            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTTTCCCTTTAGACCGTAATAGCTAAAGCANAACAGTCAACAAGTAACTAGTACGAAGGGCTCACCGTGTTCCGTACCGCTACCATTCGATTTTTGATAGTATGTATGTATTTTTAGTACACGTTTAGTGGGGTGGCGATGGTAATGATGGTGAGATTTTACATTTCGGTTCTTTCCCTTTCCCTCGGCACACGGCACTGGGGAAGGGAATTTAACCGTABATBATAGCAATTGAACAACACAAACAAACAGAGAAAAAGGTCTTAGAGTGTGAAGCCATCGGATCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTGTGTATGTATTTNTCATTAAGAAAGGCGAAAAAAGACGGTGGTAAAGTGGCGACGATTAGTTTCGTTTATAAAAGCGATCAAGAAAAAAAAACAATTATTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAG]




>consensus_8882#0
CCGCAGGCAGCGAGCGACCAAATCCCATCCCATCTACCGGGGGAACACGAGCTTTGGAGT
CGAAACGTGCGCGTCTTGGTGTTTATGTGTGTATAAGTGTGCATTTGTTGCATTCCCCGT
ATGTGCGTCCAACCCGTCCGTACGTGCATCGTGTGCCCGAACGCATTAGTTTTGTGCAAG
TGAGTGACCTTTGACCCGTCTGCAAAGGGAATTACGAAAAAGGGTGCAAACACAGCAAAC
AAAAAACAACCATACTCGCAGCAAAGGAGAAACGACGTCCGGTGACCACAGCTTCCTTTC
GCTAATACCGTCACCTTCGTCGCCGTCGTTCCGTTCCAAGATCGCCCCGCAAGATCGCCG
TTCACTACCCAGCATCCGTCACTCACGTTGCTAACCAAGGCAGGCTGTTGACAACTTGGC
TTGTGACCCTTTTTGGATTCACTCGGCAAGAAAATTGTACATCCTGAAACAGAAGCGTGC
ACACACACACAAACCCACACAAAAGCAAAATCGATTCGATCCAGTCAACTCAAATCGTAA
CAATCGTATGCCACACATGTACCTTTGCTCCGAAAGCCGTGCCTGTCGCTGTTGAATTGA
ATTGAAACAAACAACAAGCTGTAATCAGAAACGAGAACCAGTACACCTCCAGTGCTCATT
AGTATCACGTCGGTGAATAGGTGCCTTAAGTAGTGGATAGGTAGTTAGTTTCGTTTACCA
AGAAAACGCAGTGCAAGTGTGCCCAAGAACATCTGCAACTAGGCCTCGTCCAATAGGTGC
GCCCCTTACCGTCAAATGTATCCGTTTTGCCAGTACGAGCCGTTCTAAGTGCGAACAAGA
AACTGTACCATTAGTGACGGGTCGACAGGAACCGCCACACCCGGTCCTACGCCATACAGC
CCAGTTTTGAATGTGTACTGCGGGCAGCTGGATTGATTTTGTGTTCATTTTCAACAAAAA
CTGCTCGAAAAGCGGCAAACCGCGACGAACCAACAACGATCGAACGTATCGTCGCACAGA
TTTCGATTCCGCGTTGTGTTCGAGCCACTGCTGAGCAATTCGCTGCATAAAGATGCGATC
CAGCGCTGTCGGCATGAGCTCCATCCTGATCGTGGCAGTGGTCGTCGTGCTGCTGATGCT
GAACGAAAGCCACGCTACCTCTACGCCCAACAGCGATGCCCTGATCAGCCAGCTAACACG
CTCGCGCTACTGTGGCCGTCGGCTGACCGAAACGCTAGCCTTCCTCTGCCAGGGACGATA
TCCGATGCTGACACACTATCGCACAGATTATGTACACGATCAGGCAAACCAGCGAGTAAA
GGTGGAGGTGGCCACCCTGCCCGACACACTGCCGCCCGGCTTCCCTTATCCCGGTGCCGG
CGTTCATCGGCGCAGTCGGCGCAGTTCCGGCGGTATCTACGATGAGTGCTGCAAGAAGAG
CTGCTCCTACGTCGAGCTGCGTGCCTACTGTGATTGAAGCGGAAAACCCGATTGGGATGA
GGATGAGATGCGGTTAGGAGGGGGGAAAGCAGTGAAAGCACCCAAAAGGCGGATGTTACG
AATCAGGCGCAGAGAGATAGAAAGAGCGAGAGAGAATCAAGGGAAGGAGATATGTAACCG
GTAGACCGGTGTGTTTAGCAACTTGTTTACCAATTGCTTGCGTATTATTTCAATCCAGAT
TACTCTCTTCTATATCTTTTTTTGTTTAATTTGGTATTTTACTCGCCCTCCCCCCGCTTT
TCCCAAGAAGTCTCGTCCGGCGTGAGGCGATGTGTAGATCAATTGCTATTATTATTATTA
CAATTTTTATAGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTACGCCCCTA
TACGATTGTTTTTTTTTTTTTAATTGCTTGCGTGCGTGTGTGTCTGTGTCGAGAAGTAAC
TGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCA
ACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCT
TCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCC
GTGTGTCCTTTATGGTTTTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAGCAGAA
CAGTCAACAAGTAACTAGTACGAAGTGCTCACCGTGTTCCGTACCGCTACCATTCGATTT
TTGATAGTATGTATGTATTTTTAGTACACGTTTAGTGGGGTGGCGATGGTAATGATGGTG
AGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAANGGAATTT
AACCGTAGATGATAGCAATTGAACAACACAAACAAACAGAGAAAAAGGTCTTAGAGTGTG
AAGCCATCGGATCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTGTGTATGTAT
TTNTCATTAAGAAAGGCGAAAAAAGACGGTGGTAAAGTGGCGACGATTAGTTTCGTTTAT
AAAAGCGATCAAGAAAAAAAAACAATTATTAACAGAAATTGTAAAGAATGAAAAATACAT
CGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAG

consensusID : consensus_8882#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1019
fasta sequence 
                              [GCAGAATCCCCCGAGGTTGAGACGTNTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGGCTTTTTACCCATATTTTTTATTACACTATTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTNGCGAGGAATTAACAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTATTATAGGNNTACATTAATAACTTAACCCTTTAGACCGTAATAGCTAAAGCAGAACAGACAACAAGTANCTAGTACAGAAGTGCTCACCGTGTTCCGTNACCGCTACCATNNCGGATTTNATCGACTCAGCTATGTNTGTATTTATCAGTACACGTATAGAANGNNGGTGGCTGATGTGTAANTGATGGTGAGATTATACCTTCAGGTCACNTCCCCTTCCCCCATCGGAACACGGACACATGGCGGAAAGGGAAATAACACCGCANATNATAGCANATGACCAACANCAAAAACCCAAANCAAACAAAACGAAGGCAACAAAAAAAGCGAANACCCCACACAGCCCCCNTGNACCGGGCACNGGCAACGGCACCNGACACCAACANAAAACCCNACCAAGANANNACACAGAACACAACACACCACCNCANGCAANAGGGCNANACAACCACACANCNNGNCAAACAGCGGCGAACCNACACANAAAACCCACACCAAACNNGNCAAAAAAGANAAAACANCAACACAACACAAACAGGACAANACAGAANAAACAAAGCNCAGACCAAACCAAAACCAAACAAAAAAAACNGACACGANACCAAANNCCGACACACAGGACACACGACGCAANGCACACAAAN]

[+] EMBL AL930040             [GCAGAATCCCCCGAGGTTGAGACGTNTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGGCTTTTTACCCATATTTTTTATTACACTATTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTNGCGAGGAATTAACAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTATTATAGGNNTACATTAATAACTTAACCCTTTAGACCGTAATAGCTAAAGCAGAACAGACAACAAGTANCTAGTACAGAAGTGCTCACCGTGTTCCGTNACCGCTACCATNNCGGATTTNATCGACTCAGCTATGTNTGTATTTATCAGTACACGTATAGAANGNNGGTGGCTGATGTGTAANTGATGGTGAGATTATACCTTCAGGTCACNTCCCCTTCCCCCATCGGAACACGGACACATGGCGGAAAGGGAAATAACACCGCANATNATAGCANATGACCAACANCAAAAACCCAAANCAAACAAAACGAAGGCAACAAAAAAAGCGAANACCCCACACAGCCCCCNTGNACCGGGCACNGGCAACGGCACCNGACACCAACANAAAACCCNACCAAGANANNACACAGAACACAACACACCACCNCANGCAANAGGGCNANACAACCACACANCNNGNCAAACAGCGGCGAACCNACACANAAAACCCACACCAAACNNGNCAAAAAAGANAAAACANCAACACAACACAAACAGGACAANACAGAANAAACAAAGCNCAGACCAAACCAAAACCAAACAAAAAAAACNGACACGANACCAAANNCCGACACACAGGACACACGACGCAANGCACACAAAN]




>consensus_8882#1
GCAGAATCCCCCGAGGTTGAGACGTNTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTT
ACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCG
TTTCCTTGGCTTTTTACCCATATTTTTTATTACACTATTTCAATATATACCATCATCAAT
ACGGCTTCTATCGTTCTGTNGCGAGGAATTAACAAGCATTTCAAAAGAGTCTACCTTCCC
TAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATA
GCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCG
TGTCCGTGTGTCCTATTATAGGNNTACATTAATAACTTAACCCTTTAGACCGTAATAGCT
AAAGCAGAACAGACAACAAGTANCTAGTACAGAAGTGCTCACCGTGTTCCGTNACCGCTA
CCATNNCGGATTTNATCGACTCAGCTATGTNTGTATTTATCAGTACACGTATAGAANGNN
GGTGGCTGATGTGTAANTGATGGTGAGATTATACCTTCAGGTCACNTCCCCTTCCCCCAT
CGGAACACGGACACATGGCGGAAAGGGAAATAACACCGCANATNATAGCANATGACCAAC
ANCAAAAACCCAAANCAAACAAAACGAAGGCAACAAAAAAAGCGAANACCCCACACAGCC
CCCNTGNACCGGGCACNGGCAACGGCACCNGACACCAACANAAAACCCNACCAAGANANN
ACACAGAACACAACACACCACCNCANGCAANAGGGCNANACAACCACACANCNNGNCAAA
CAGCGGCGAACCNACACANAAAACCCACACCAAACNNGNCAAAAAAGANAAAACANCAAC
ACAACACAAACAGGACAANACAGAANAAACAAAGCNCAGACCAAACCAAAACCAAACAAA
AAAAACNGACACGANACCAAANNCCGACACACAGGACACACGACGCAANGCACACAAAN

consensusID : consensus_8882#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 666
fasta sequence 
                              [CCGCCCACGCGTCCGGCGATGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAAGGGAATTTAACCGTAGATGATAGCAATTGAACAACACAAACAAACAGAGAAAAAGTTCTTAGAGTGTGAAGCCATCGGGTCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTGTGTGTATGTATTTACCATTAAGAAAGGCGAAAAAAGACGTTGGTAAAGTGGCGACGATTAGTTTCGTTTAGAAAAGCGATCAAGAAAAAAAACAATTATTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAGTATGGTTTCGATAGGGAAGAGCTGCTATACTTTAAATCCCACTTTCAATTGACCGAGCCGTGCTACAGAACCATTCTTCGTACAATCGCCACATTCGGCCCACCCGACCACCCCGCACCGTGTGTCCCTATGTCCTCTGAACGAATGTGATCGTATTTGCCTGTGTAGGCTCTCCTCTGTGTATCGATAGAGTTAGTAGCCGCGTACGAAGTAGTAGATTTAAAGAAACTTCGAACTTCAGACATCAATGAATGACAGTAAAAACAAAAAAACACACAACAAAAAAAAAAAAAAA]

[+] EMBL BM652565             [CCGCCCACGCGTCCGGCGATGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAAGGGAATTTAACCGTAGATGATAGCAATTGAACAACACAAACAAACAGAGAAAAAGTTCTTAGAGTGTGAAGCCATCGGGTCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTGTGTGTATGTATTTACCATTAAGAAAGGCGAAAAAAGACGTTGGTAAAGTGGCGACGATTAGTTTCGTTTAGAAAAGCGATCAAGAAAAAAAACAATTATTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAGTATGGTTTCGATAGGGAAGAGCTGCTATACTTTAAATCCCACTTTCAATTGACCGAGCCGTGCTACAGAACCATTCTTCGTACAATCGCCACATTCGGCCCACCCGACCACCCCGCACCGTGTGTCCCTATGTCCTCTGAACGAATGTGATCGTATTTGCCTGTGTAGGCTCTCCTCTGTGTATCGATAGAGTTAGTAGCCGCGTACGAAGTAGTAGATTTAAAGAA                                                                    ]
[-] EMBL AGA282876            [                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTGCTACAGAACCATTCTTCGTACAATCGCCACATTCGGCCCACCCGACCACCCCGCACCGTGTGTCCCTATGTCCTCTGAACGAATGTGATCGTATTTGCCTGTGTAGGCTCTCCTCTGTGTATCGATAGAGTTAGTAGCCGCGTACGAAGTAGTAGATTTAAAGAAACTTCGAACTTCAGACATCAATGAATGACAGTAAAAACAAAAAAACACACAACAAAAAAAAAAAAAAA]




>consensus_8882#2
CCGCCCACGCGTCCGGCGATGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTT
CCCCTCGGCACACGGCACTGGGGAAGGGAATTTAACCGTAGATGATAGCAATTGAACAAC
ACAAACAAACAGAGAAAAAGTTCTTAGAGTGTGAAGCCATCGGGTCTGAAGGGTTTGTAC
GCACTGCACCATTTTAGGCGTGTGTGTGTATGTATTTACCATTAAGAAAGGCGAAAAAAG
ACGTTGGTAAAGTGGCGACGATTAGTTTCGTTTAGAAAAGCGATCAAGAAAAAAAACAAT
TATTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCG
ATCGCAGTCAGTATGGTTTCGATAGGGAAGAGCTGCTATACTTTAAATCCCACTTTCAAT
TGACCGAGCCGTGCTACAGAACCATTCTTCGTACAATCGCCACATTCGGCCCACCCGACC
ACCCCGCACCGTGTGTCCCTATGTCCTCTGAACGAATGTGATCGTATTTGCCTGTGTAGG
CTCTCCTCTGTGTATCGATAGAGTTAGTAGCCGCGTACGAAGTAGTAGATTTAAAGAAAC
TTCGAACTTCAGACATCAATGAATGACAGTAAAAACAAAAAAACACACAACAAAAAAAAA
AAAAAA

consensusID : consensus_8882#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 460
fasta sequence 
                              [CCGGATCAATTGCTATTATTATTATTACAATTTTTATAGGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTAATTGCTTGC--GCGTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAA]

[+] EMBL BM615515             [CCGGATCAATTGCTATTATTATTATTACAATTTTTATAGGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTAATTGCTTGC  GCGTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAA]
[+] EMBL BX602824             [                                                       GCAACACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTAATTGCTTGCGTGCGTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCAT                                                                                                                                                                 ]




>consensus_8882#3
CCGGATCAATTGCTATTATTATTATTACAATTTTTATAGGATATTACAATTAGCTGCAAC
ACGTTTTGTGCGCTACATTACGCCCCTATACGATTGTTTTTTTTTTTTAATTGCTTGCGC
GTGTGTGTCTGTGTCGAGAAGTAACTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGC
TCCGAGATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTT
TGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATC
ATCAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACC
TTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTA
ATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAA

consensusID : consensus_8882#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence 
                              [GGCCAAGAATCGGCACGATGGACTGGAGACGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGAATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTTTATGGTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTACGAAGTGC]

[+] EMBL BX467968             [GGCCAAGAATCGGCACGATGGACTGGAGACGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGAATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATCATCAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACCTTCCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGAGCGTGTCCGTGTGTCCTTTATGGTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTACGAAGTGC]




>consensus_8882#4
GGCCAAGAATCGGCACGATGGACTGGAGACGTTTGGGCATCTCAAGCGTCTCGTGGCTCC
GAGAATTTACTATAATTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTG
AGAATGCGTTTCCTTGCTTTTTACCCATTTTTTTATTCACTTTTCAATATATACCATCAT
CAATACGGCTTCTATCGTTCTGTTGCGAGGAATTAAAAGCATTTCAAAAGAGTCTACCTT
CCCTAAACACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGTAAT
ATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAGCGA
GCGTGTCCGTGTGTCCTTTATGGTTTTTTTTTCTTTCCCTTTAGACCGTAATAGCTAAAG
CAGAACAGTCAACAAGTAACTAGTACGAAGTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CCGCAGGCAGCGAGCGACCAAATCCCATCCCATCTACCGGGGGAACACGAGCTTTGGAGT 60
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CGAAACGTGCGCGTCTTGGTGTTTATGTGTGTATAAGTGTGCATTTGTTGCATTCCCCGT 120
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      ATGTGCGTCCAACCCGTCCGTACGTGCATCGTGTGCCCGAACGCATTAGTTTTGTGCAAG 180
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TGAGTGACCTTTGACCCGTCTGCAAAGGGAATTACGAAAAAGGGTGCAAACACAGCAAAC 240
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      AAAAAACAACCATACTCGCAGCAAAGGAGAAACGACGTCCGGTGACCACAGCTTCCTTTC 300
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GCTAATACCGTCACCTTCGTCGCCGTCGTTCCGTTCCAAGATCGCCCCGCAAGATCGCCG 360
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TTCACTACCCAGCATCCGTCACTCACGTTGCTAACCAAGGCAGGCTGTTGACAACTTGGC 420
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TTGTGACCCTTTTTGGATTCACTCGGCAAGAAAATTGTACATCCTGAAACAGAAGCGTGC 480
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      ACACACACACAAACCCACACAAAAGCAAAATCGATTCGATCCAGTCAACTCAAATCGTAA 540
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CAATCGTATGCCACACATGTACCTTTGCTCCGAAAGCCGTGCCTGTCGCTGTTGAATTGA 600
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      ATTGAAACAAACAACAAGCTGTAATCAGAAACGAGAACCAGTACACCTCCAGTGCTCATT 660
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      AGTATCACGTCGGTGAATAGGTGCCTTAAGTAGTGGATAGGTAGTTAGTTTCGTTTACCA 720
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      AGAAAACGCAGTGCAAGTGTGCCCAAGAACATCTGCAACTAGGCCTCGTCCAATAGGTGC 780
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GCCCCTTACCGTCAAATGTATCCGTTTTGCCAGTACGAGCCGTTCTAAGTGCGAACAAGA 840
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      AACTGTACCATTAGTGACGGGTCGACAGGAACCGCCACACCCGGTCCTACGCCATACAGC 900
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CCAGTTTTGAATGTGTACTGCGGGCAGCTGGATTGATTTTGTGTTCATTTTCAACAAAAA 960
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CTGCTCGAAAAGCGGCAAACCGCGACGAACCAACAACGATCGAACGTATCGTCGCACAGA 1020
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TTTCGATTCCGCGTTGTGTTCGAGCCACTGCTGAGCAATTCGCTGCATAAAGATGCGATC 1080
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CAGCGCTGTCGGCATGAGCTCCATCCTGATCGTGGCAGTGGTCGTCGTGCTGCTGATGCT 1140
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GAACGAAAGCCACGCTACCTCTACGCCCAACAGCGATGCCCTGATCAGCCAGCTAACACG 1200
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CTCGCGCTACTGTGGCCGTCGGCTGACCGAAACGCTAGCCTTCCTCTGCCAGGGACGATA 1260
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TCCGATGCTGACACACTATCGCACAGATTATGTACACGATCAGGCAAACCAGCGAGTAAA 1320
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GGTGGAGGTGGCCACCCTGCCCGACACACTGCCGCCCGGCTTCCCTTATCCCGGTGCCGG 1380
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CGTTCATCGGCGCAGTCGGCGCAGTTCCGGCGGTATCTACGATGAGTGCTGCAAGAAGAG 1440
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CTGCTCCTACGTCGAGCTGCGTGCCTACTGTGATTGAAGCGGAAAACCCGATTGGGATGA 1500
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GGATGAGATGCGGTTAGGAGGGGGGAAAGCAGTGAAAGCACCCAAAAGGCGGATGTTACG 1560
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ---------------------------------------CCGGATCAATTGCTATTATTA 21
consensus_8882#0      AATCAGGCGCAGAGAGATAGAAAGAGCGAGAGAGAATCAAGGGAAGGAGATATGTAACCG 1620
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ------------------------------------------------------------
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      TTATTACAATTTTTATAGGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTAC 81
consensus_8882#0      GTAGACCGGTGTGTTTAGCAACTTGTTTACCAATTGCTTGCGTATTATTTCAATCCAGAT 1680
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ----------------------------------------------GCAGAATCCCC--- 11
consensus_8882#4      -------------------------------------------GGCCAAGAATCGGCACG 17
consensus_8882#3      GCCCCTATACGATTGTTTTTTTTTTTTAATTGCTTGCGCGTGTGTGTCTGTGTCGAGA-- 139
consensus_8882#0      TACTCTCTTCTATATCTTTTTTTGTTTAATTTGGTATTTTACTCGCCCTCCCCCCGC--- 1737
consensus_8882#2      -------------------------------CCGCCCACGCGTCCGGCGATGGTAATGAT 29
                                                                                  

consensus_8882#1      -CGAGGTTGAGAC-GTNTGGGCATC-TCAAGCGTCTCGTGGCTCCGAGA-TTTACTATAA 67
consensus_8882#4      ATGGACTGGAGAC-GTTTGGGCATC-TCAAGCGTCTCGTGGCTCCGAGAATTTACTATAA 75
consensus_8882#3      AGTAACTGGAGACCGTTTGGGCATC-TCAAGCGTCTCGTGGCTCCGAGA-TTTACTATAA 197
consensus_8882#0      -TTTTCCCAAGAAGTCTCGTCCGGCGTGAGGCGATGTGTAGATCAATTG--CTATTATTA 1794
consensus_8882#2      GGTGAGATTTTACCTTTCGGTTCTTTCCCTTCCCCTCGGCACACGGCACTGGGGAAGGGA 89
                                 *      *            *     *     *               *

consensus_8882#1      TTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTT 127
consensus_8882#4      TTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTT 135
consensus_8882#3      TTATATCAACACTCTATATCCATGTACCTTTGCGTTAGTGGTTTGAGAATGCGTTTCCTT 257
consensus_8882#0      TTATTACAAT-TTTTATAGATATTACAATTAGCTGCAACACGTTTTGTGCGCTACATTAC 1853
consensus_8882#2      ATTTAACCGTAGATGATAGCAATTGAAC--AACACAAACAAACAGAGAAAAAGTT-CTTA 146
                       * *  *        ***   **         *   *         *             

consensus_8882#1      GGCTTTTTAC--CCATATTTTTTATTACACTATTTCAATATATACCATCATCAATA-CGG 184
consensus_8882#4      G-CTTTTTAC--CCAT-TTTTTTATT-CACT-TTTCAATATATACCATCATCAATA-CGG 188
consensus_8882#3      G-CTTTTTAC--CCAT-TTTTTTATT-CACT-TTTCAATATATACCATCATCAATA-CGG 310
consensus_8882#0      GCCCCTATACGATTGTTTTTTTTTTTTTAAT-TGCTTGCGTGCGTGTGTGTCTGTGTCGA 1912
consensus_8882#2      GAGTGTGAAG--CCATCGGGTCTGAAGGGTTTGTACGCACTGCACCATTTTAGGCGTGTG 204
                      *    *  *      *    * *       *         *         *         

consensus_8882#1      CTTCTAT---CGTTCTGTNGCGAGGAATTAACAAGCATTTCAAAA-----GAGTCTACCT 236
consensus_8882#4      CTTCTAT---CGTTCTGTTGCGAGGAATTAA-AAGCATTTCAAAA-----GAGTCTACCT 239
consensus_8882#3      CTTCTAT---CGTTCTGTTGCGAGGAATTAA-AAGCATTTCAAAA-----GAGTCTACCT 361
consensus_8882#0      GAAGTAA---CTGGAGACCGTTTGGGCATCTCAAGCGTCTCGTGGCTCCGAGATTTACTA 1969
consensus_8882#2      TGTGTATGTATTTACCATTAAGAAAGGCGAAAAAAGACGTTGGTAAAGTGGCGACGATTA 264
                          **                          **     *                *   

consensus_8882#1      TCCCTAAAC--ACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGT 294
consensus_8882#4      TCCCTAAAC--ACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGT 297
consensus_8882#3      TCCCTAAAC--ACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGT 419
consensus_8882#0      TAATTATATCAACACACACAAACAAACAAACAAACATATGTATACAGACAGAGTTACGGT 2029
consensus_8882#2      GTTTCGTTT--AGAAAAGCGATCAAGAAAAAAAACAATTATTAACAGAAATTGTAAAGAA 322
                                 * * *  * * ***  *** *****  * *  ***** *  ** * *  

consensus_8882#1      AATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAG 354
consensus_8882#4      AATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAG 357
consensus_8882#3      AATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAA------------------- 460
consensus_8882#0      AATATAGCGCTTCTGTGGTACGGATGGAACGTGAGACGGAACTACGGGTGGTGGCATCAG 2089
consensus_8882#2      TGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGATCGCAGTCAGTATGGTTTCGA 382
                         * *   * **  * *  *  *   **   *   **                      

consensus_8882#1      CGAGCGTGTCCGTGTGTCCTATTATAGGNNTACATTAATAACTTAACCCTTTAGACCGTA 414
consensus_8882#4      CGAGCGTGTCCGTGTGTCCT-TTATGGTTTTTTTTT------CTTTCCCTTTAGACCGTA 410
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CGAGCGTGTCCGTGTGTCCT-TTATGGTTTTTTTTTTTT---CTTTCCCTTTAGACCGTA 2145
consensus_8882#2      TAGGGAAGAGCTGCTATACT-TTAAATCCCACTTTCAATTGACCGAGCCGTGCTACAGAA 441
                                                                                  

consensus_8882#1      ATAGCTAAAGCAGAACAGACAACAAGTANCTAGTACAGAAGTGCTCACCGTGTTCCGTNA 474
consensus_8882#4      ATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTAC-GAAGTGC---------------- 453
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      ATAGCTAAAGCAGAACAGTCAACAAGTAACTAGTAC-GAAGTGCTCACCGTGTTCCGTA- 2203
consensus_8882#2      CCATTCTTCGTACAATCGCCACATTCGGCCCACCCGACCACCCCGCACCGTGTGTCCCTA 501
                                                                                  

consensus_8882#1      CCGCTACCATNNCGGATTTNATCGACTCAGCTATGTNTGTATTTATCAGTACACGTATAG 534
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CCGCTACCATTCGATTTTTGATAG-------TATGTATGTATTT-TTAGTACACGTTTAG 2255
consensus_8882#2      TGTCCTCTGAACGAATGTGATCGTATTTGCCTGTGTAGGCTCTCCTCTGTGTATCGATAG 561
                                                                                  

consensus_8882#1      AANGNNGGTGGCTGATGTGTAANTGATGGTGAGATTATACCTTCAGGTCACNTCCCCTTC 594
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TGGGGTGGCGA------TGGTAATGATGGTGAGATTTTACCTTTCGGTTCTTTCCCTTCC 2309
consensus_8882#2      AGTTAGTAGCC-----GCGTACGAAGTAGTAGATTTAAAGAAACTTCGAACTTCAGACAT 616
                                                                                  

consensus_8882#1      CCCCATCGGAACACGGACACATGGCGGAAAGGGAAATAACACCGCANATNATAGCANATG 654
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CCTCGGCACA-CGGCACTGGGGAANGGAATTTAACCGTAGATGATAGCAATTGAACAACA 2368
consensus_8882#2      CAATGAATGACAGTAAAAACAAAAAAACACACAACAAAAAAAAAAAAAAA---------- 666
                                                                                  

consensus_8882#1      ACCAACANCAAAAACCCAAANCAAACAAAACGAAGGCAACAAAAAAAGCGAANACCCCAC 714
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CAAACAAACAGAGAAAAAGGTCTTAGAGTGTGAAGCCATCGGATCTGAAGGGTTTGTACG 2428
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ACAGCCCCCNTGNACCGGGCACNGGCAACGGCACCNGACACCAACANAAAACCCNACCAA 774
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CACTGCACCATTTTAGGCGTGTGTGTATGTATTTNTCATTAAGAAAGGCGAAAAAAGACG 2488
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      GANANNACACAGAACACAACACACCACCNCANGCAANAGGGCNANACAACCACACANCNN 834
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      GTGGTAAAGTGGCGACGATTAGTTTCGTTTATAAAAGCGATCAAGAAAAAAAAACAATTA 2548
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      GNCAAACAGCGGCGAACCNACACANAAAACCCACACCAAACNNGNCAAAAAAGANAAAAC 894
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      TTAACAGAAATTGTAAAGAATGAAAAATACATCGATTGATCTTAACAAAAAGGGCTCGAT 2608
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      ANCAACACAACACAAACAGGACAANACAGAANAAACAAAGCNCAGACCAAACCAAAACCA 954
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      CGCAGTCAG--------------------------------------------------- 2617
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      AACAAAAAAAACNGACACGANACCAAANNCCGACACACAGGACACACGACGCAANGCACA 1014
consensus_8882#4      ------------------------------------------------------------
consensus_8882#3      ------------------------------------------------------------
consensus_8882#0      ------------------------------------------------------------
consensus_8882#2      ------------------------------------------------------------
                                                                                  

consensus_8882#1      CAAAN 1019
consensus_8882#4      -----
consensus_8882#3      -----
consensus_8882#0      -----
consensus_8882#2      -----


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)