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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8914#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1867 fasta sequence
[AAAACGCATGCTGCTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATC-AAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGACTACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGACGACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGCGATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTAAAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAGCTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG-AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGAGACGGTTATGGCGG]
[+] EMBL BX620474 [AAAACGCATGCTGCTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAG ]
[+] EMBL BX623076 [ CTGCACCTCACAACTCCAATCCATTCGATTGTTCAACGCTAATCAAGTCAAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGTCTTTTCGTGTACCCCGCGATCTTACCCTTGCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACACCCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATC AAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAAC ]
[+] EMBL BX617298 [ AGACTGATCGCAATAGAAATGATAAAGATGGAAGGAATAAAAAGAACACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGCTCAACGTGCTTTGCTCCGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCGTATTCGCTAGAGGGAGCTCAAAAATAGATTTGGAAGATGAACGAAAGCGAATTCAAAATCTTTGCGAAGACATGGATGAGGAAATGGCGGAACTGGATCAAAAAATGGCAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGACTACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCC ]
[+] EMBL BM636944 [ ccgAACAAAGCTGGATTCGTTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAACAAAATCCTCCTTCTACAACTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGACGACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGCGATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTAAAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAGCTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG AAATACACGATCCTAGATGGCAACCCT ]
[-] EMBL BX623647 [ CTATCACCACAAAGTNGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAAATACACGATCNTAGATGGCAACCCTAGTGCCCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGGACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAGCGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCA ]
[-] EMBL BX625841 [ GTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATG AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGA ]
[-] EMBL BX623528 [ ATTCTACATG AAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCT ]
[-] EMBL BM621813 [ GACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCTAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTTATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCAGTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTACGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTcgg ]
[-] EMBL BM592339 [ GCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGATCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACGCGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGATACGGTTATGGCGG]
consensusID : consensus_8914#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 970 fasta sequence
[CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAATTTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGTTTTGGGCGCTTGTTTGGGTTNGAAATCCACCCAANGGGGGGCGCATATGTAAGGGCCGTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTTACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCTCTTCCCCTGTATGTGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTNTGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAGCAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTCTTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCACATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTGGCCAATTGCTGGCTTGCCTGCTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATGCCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTATTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCTCCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATAACCTCGGGGGATTCT]
[-] EMBL AL694960 [CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAATTTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGTTTTGGGCGCTTGTTTGGGTTNGAAATCCACCCAANGGGGGGCGCATATGTAAGGGCCGTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTTACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCTCTTCCCCTGTATGTGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTNTGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAGCAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTCTTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCACATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTGGCCAATTGCTGGCTTGCCTGCTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATGCCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTATTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCTCCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAAAAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATAACCTCGGGGGATTCT]
consensusID : consensus_8914#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 734 fasta sequence
[CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCA]
[-] EMBL CNS08DFF [CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTCTTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCATTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTATGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATTGTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACGGAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGTGTATTGAAGCA]
[+] EMBL CNS08DFG [ TTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGAAAAATGTTTTCGATTGCCCCTTTTCTATGCGTACTTTCGCTTCGATTTGCCCCTTTTTGTCCATTTCTCTTTGCTCTTTCAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTG ]
consensusID : consensus_8914#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence
[CCCAGGTTTTGTTCAACGCTAATCAAGTCAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGGTCTTTTCGTGTACCCCGCGATCTTACCCTTGNCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACAACCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCNATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAATAGCATTTGGGAAGATGAACCGCAAAGCGACATTCANANATCTTTGCCGAACGGACCTTGGCNTGANCGACACCT]
[+] EMBL AL693209 [CCCAGGTTTTGTTCAACGCTAATCAAGTCAGATGGACCATAGTCCGCGTATTAAGCAAGAGCCAGGAATCGATACGCAATACTTAACAAAAGGAAACAATATAATCGGCAATGTTGCAGTTCCGATGGAAGCAACGGTAAAACCAGAGCGCCTACAGGTCTTTTCGTGTACCCCGCGATCTTACCCTTGNCCAATGGTCGCACGACGAAGCCACCCAACAACAAAAAAGTCTACAACCCGAACTTAAATGCAGTGAGAAACAAAAATACTGATGTAAAAACTGCNATCAACCGGTCCCAAAGGCCGAGCTAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATCCAGACGTCTGGTATCTTTTCGGATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTCCAGATCAGACAAATCTAGTTCCTCGAAAGAACCTGGGGACTCAATTCAGAAACCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAATAGCATTTGGGAAGATGAACCGCAAAGCGACATTCANANATCTTTGCCGAACGGACCTTGGCNTGANCGACACCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8914#0 ------------------------------------------------------------
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 CCGGGATTTTGGCTGAAAAGGGCGTTGTTTGTTCCCCTCTGTNTTCCGCGCTCCGGAAAT 60
consensus_8914#0 ----------------------------AAAACGCATGCTGCTGCACCTCACAACTCCAA 32
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------CCCCGGCACATGTGGCCTTTTTTTTTTTTTTTTTTT 36
consensus_8914#1 TTGCCTTGATANAGAAAGCCCCAGANTATATGTTTTAATTGTAGACCGCGCAACCNGTGT 120
consensus_8914#0 TCCATTCGATTGTTCAACGCTA-----ATCAAGTCAAGATGGACCATA---GTCCGCGTA 84
consensus_8914#3 CCCAGGTT-TTGTTCAACGCTA-----ATCAAGTCA-GATGGACCATA---GTCCGCGTA 50
consensus_8914#2 TTTTTTTTTTTTTTTAACATCAGCACTATCAACACAAAGTTGAACGCA----TCCCCGGA 92
consensus_8914#1 TTTGGGCGCTTGTTTGGGTTNGAA---ATCCACCCAANGGGGGGCGCATATGTAAGGGCC 177
** ** *** * ** * * * * *
consensus_8914#0 TTAAGCAAG---AGCCAGGAAT-CGATACGCAATACTTAACAAAAGGAAACAATATAATC 140
consensus_8914#3 TTAAGCAAG---AGCCAGGAAT-CGATACGCAATACTTAACAAAAGGAAACAATATAATC 106
consensus_8914#2 CTGGGAATATTTATTCAAGAATTCTACATGAAATACACGATCCTAGATGGCAACCCTAGT 152
consensus_8914#1 GTTGCCGTGGTGNATTCCGNGCCCTATCTNGTGGGCTTCCGGAAAATGGGTGTTTGGGTT 237
* * * * * *
consensus_8914#0 GGCAAT--GTTGCAGTTCCGATG--GAAGCAACGGTAAAACCA-GAGCGCCTACAG-TCT 194
consensus_8914#3 GGCAAT--GTTGCAGTTCCGATG--GAAGCAACGGTAAAACCA-GAGCGCCTACAGGTCT 161
consensus_8914#2 GCTCTT--GACCTTTTTCTTTTGCAGAAGAGTCTGTAGAACGATGGAGGTTTCCTTCGCG 210
consensus_8914#1 ACAAACCCGGCCCGGTGTTAACTTAAAAAAATGTGTTTNTTTCTGTCCGGGATNTGGGCT 297
* * ** ** * * *
consensus_8914#0 TTTCG---------TGTACCCCGC-GATCTTACCCTTGCC-AAT-GGTCGCAC-GACGAA 241
consensus_8914#3 TTTCG---------TGTACCCCGC-GATCTTACCCTTGNCCAAT-GGTCGCAC-GACGAA 209
consensus_8914#2 ATCCAAAGCAAAGTTATACGACGTTGGTTGTACCAGGGCTAGCTCGATCGCTTTGTCGAT 270
consensus_8914#1 CTTCCCCTGTATG-TGGTCATAATGGGCCGTTACCTTTGTTGCGGCGTTGCGGAGTGTTN 356
* * * * * * * * ** *
consensus_8914#0 GCCACCCAACAACAAAAAAGTCTACACC----CCGAACTTAA-----ATGCAGTGAGAAA 292
consensus_8914#3 GCCACCCAACAACAAAAAAGTCTACAAC----CCGAACTTAA-----ATGCAGTGAGAAA 260
consensus_8914#2 GTTGTCACGCGTGATAAATGTTTTCGATTGCTCCTTTTCTAT-----GCGTACTTTCGCT 325
consensus_8914#1 TGGCTCCATTGTGTTTTGTGTCCCCTAGGGTGTCGTCTGTGTGGCCTACCTNTTTTCAAG 416
* ** * * * *
consensus_8914#0 CAAAAATAC----TGATGTAAAA--ACTGCA-TCAACCGGTCC-----CAAAGGCCGAGC 340
consensus_8914#3 CAAAAATAC----TGATGTAAAA--ACTGCNATCAACCGGTCC-----CAAAGGCCGAGC 309
consensus_8914#2 TCGATTTGC----TCCTTTTTGTCCATTTCTCTTTGCTCTTTCAG---CAAAAGCCTTTC 378
consensus_8914#1 CAAAAAAGCCACCTGTTCCAGAGAAATTGTAANCTCCCTGTACGAGCCTGGAGTCCGTTC 476
* * * * * * * * * * ** *
consensus_8914#0 TAAGACTGATCGCAATAGAAATGATAA-AGATGGAAGGAATAAAAAGAACACCTTGATC- 398
consensus_8914#3 TAAGACTGATCGCAATAGAAATGATAACAGATGGAAGGAATAAAAAGACCACCTTGATC- 368
consensus_8914#2 AAGAATGTACTCCTTACGAGCTGATCG-TTCTGCAGCCAACCGCTCTTCGCGTTTGGCAG 437
consensus_8914#1 TTGCCAAGCACATACCCGCTCCTTCCGCAGTTTGGGCAGGCAAGTTGTGCCGGGTGTCAC 536
* * **
consensus_8914#0 CAGACGTCTGGTATCTTTTCG---GATGGTTTAGCTCAACGTGCTTTGCTCCG-TACGTC 454
consensus_8914#3 CAGACGTCTGGTATCTTTTCG---GATGGTTTAGGTCAACGTGCTTTGGTCCGGTACGTC 425
consensus_8914#2 CAGTTTGCCGGTTCCATTCTT---CGT--TCCTGCGCAATGCTTCCTGCCATTCTGCTTC 492
consensus_8914#1 ATTGCTTGCCGTTGCACTGCGCAAAATGGCCTTGCTCTG-GCCAATTGCTGGCTTGCCTG 595
** * * * * * * ** * * *
consensus_8914#0 CAGATCAGACAAA---TCTAGTTCCTCG-----AAAGAACCTGGGGACTCAATTCAGAAA 506
consensus_8914#3 CAGATCAGACAAA---TCTAGTTCCTCG-----AAAGAACCTGGGGACTCAATTCAGAAA 477
consensus_8914#2 CTCTTCCTCCGGGG--TTTGGAGAACTA-----AACCGGCACGTGAAACTAGCTTGTATG 545
consensus_8914#1 CTTGCCTGCCGGGGGTTTTGGAGAACTATAACCAGGCAACGTGGAAACTAGCTTTGTATG 655
* * * * * * * * * * * *
consensus_8914#0 CCC-GTATTC-GCTA--GAGGGAGCT--CAAAAA---TAG-ATTTGG--AAGATGAACG- 553
consensus_8914#3 CCCCGTATTCCGCTACGAAGGGAGNCTCNNAAAA---TAGCATTTGG-GAAGATGAACCG 533
consensus_8914#2 CCT-CTACTTCATCGCGCAAGAAGTTTCGTACCGC--TTTCATCTGC-GTGCGATAGTTA 601
consensus_8914#1 CCTGCTACTTCATCGCGCAAAAAGTTTCGTACCGCTTNTGCATCTNGCGTGCGATAGTTA 715
** ** * * ** * ** * *
consensus_8914#0 --AAAGCGA-ATTCAAAA-TCTTT-------GCGAAGACATGGATGAGGAAATGGCGGA- 601
consensus_8914#3 C-AAAGCGACATTCANANATCTTT-------GCCGA---ACGGACCTTGGCNTGANCGAC 582
consensus_8914#2 T-TGTGCAATCTTTTTAGCTCTTC-------AATCTCTTCCTCAATCTGTTTCTTGCGCT 653
consensus_8914#1 TTGGTGCAATCTNTTGAGCTGCTTCAATGCTGCTTGCCTGCAATCTGTGTTCTTACAGCT 775
** * * * * * * *
consensus_8914#0 ACTGGATCAAAAATGG---CAAATGGGTTAAAACTACCAGTCGTGCTGGAAAACTCTGAC 658
consensus_8914#3 ACCT-------------------------------------------------------- 586
consensus_8914#2 CCGGCACACGGAACAG---TTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAA 710
consensus_8914#1 CCGGCACACAGGAACAGTTNTGGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAA 835
*
consensus_8914#0 TACAAAATCAAACCACCGGAGGTAAAGATAGAAAATTTGCCTGAAACAAAGCTGGATTCG 718
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 AGCGAACTGTGGTGTATTGAAGCA------------------------------------ 734
consensus_8914#1 AGCGAACTGTGGTGTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGAAA 895
consensus_8914#0 TTTAATTCGGTGGAAAACGTGTTATCCGGTGAGCAAACAAATAAAATCTTCCTTCTACAA 778
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 AAGTTGCCGCTATATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACATA 955
consensus_8914#0 CTTCCGGATGCTTTACCTGGAAAATCCGACGATGGAAACAAACGCCCGACCAACGGCGAC 838
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ACCTCGGGGGATTCT--------------------------------------------- 970
consensus_8914#0 GACAGCAAACCGGAAGCAACGGCAAATGGTGAAGAAACGCCAAAATATTGTACGGTACGC 898
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 GATTTGGCAGAAGGTTACATTGGTAAAATAATCAGGTACCGCTCGGGAAAGGTAAAATTA 958
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 AAGCTCGGAGAAATCATGTTTGACATCAGCGTCGGTATGGACACTGGATTCTTACAGGAG 1018
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 CTAGTTTCTATAAATACTAATTCAGTAGAACGGAATGGTAACATAATTAACATCAGCACT 1078
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 ATCAACACAAAGTTGAACGCATCCCCGGACTGGGAATATTTATTCAAGAATTCTACATGA 1138
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 AATACACGATCCTAGATGGCAACCCTAGTGCTCTTGACCTTTTTCTTTTGCAGAAGAGTC 1198
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 TGTAGAACGATGGAGGTTTCCTTCGCGATCCAAAGCAAAGTTATACGACGTTGGTTGTAC 1258
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 CAGGGCTAGCTCGATCGCTTTGTCGATGTTGTCACGCGTGATAAATGTTTTCGATTGCTC 1318
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 CTTTTCTATGCGTACTTTCGCTTCGATTTGCTCCTTTTTGTCCATTTCTCTTTGCTCTTT 1378
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 CAGCAAAAGCCTTTCAAGAATGTACTCCTTACGAGCTGATCGTTCTGCAGCCAACCGCTC 1438
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 TTCGCGTTTGGCAGCAGTTTGCCGGTTCCATTCTTCGTTCCTGCGCAATGCTTCCTGCCA 1498
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 TTCTGCTTCCTCTTCCTCCGGGGTTTGGAGAACTAAACCGGCACGTGAAACTAGCTTGTA 1558
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 TGCCTCTACTTCATCGCGCAAGAAGTTTCGTACCGCTTTCATCTGCGTGCGATAGTTATT 1618
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 GTGCAATCTTTTTAGCTCTTCAATCTCTTCCTCAATCTGTTTCTTGCGCTCCGGCACACG 1678
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 GAACAGTTTGCTTTTGGCTGTACCGAGCCAACGTGGTTTTCGTCGAAAGCGAACTGTGGT 1738
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 GTATTGAAGCAGAGCCAGTGCTCTTGGTTTTGTGAACACACCGGACAAAGTTGCCGCTAT 1798
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 ATTAGCCATCATAATTATATTTCCTCTGTCGGCAGAGCAGAGACACGTTTGTTGAGACGG 1858
consensus_8914#3 ------------------------------------------------------------
consensus_8914#2 ------------------------------------------------------------
consensus_8914#1 ------------------------------------------------------------
consensus_8914#0 TTATGGCGG 1867
consensus_8914#3 ---------
consensus_8914#2 ---------
consensus_8914#1 ---------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||