cluster # 8933

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8933 cluster # 8933 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8933#0 length = 1344 sequences # 11

consensus_8933#1 length = 668 sequences # 1
consensus_8933#2 length = 147 sequences # 1

consensusID : consensus_8933#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1344
fasta sequence

                              [TTTTTCTTGTTTACTGTTGATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATC-GAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC-T-TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC-AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAATGTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACAAGTGAATAAAAAAGTTCTAAGAGTCAATTAAG]

[+] EMBL AGA280888            [TTTTTCTTGTTTACTGTTGATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATC GAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC T TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS092ID             [        GTTTACTGTTGATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATC GAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC T TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGA GCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGACCTTTCGATATACGTAGGATGAAAAATCACATCCATGTTTACAAAGGTTTTACCGGCACGTTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAA                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09PFO             [                  GATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATC GAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC T TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGACCTTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGTTTACATCTATGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08OK6             [                  GATTGATGGTCGGCGTTGTTGCTAGAACG AGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATC GAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC T TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGA GCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM607006             [                               ccgTGTTGCTAGAACGAAGAACTGATTCGTTAAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGCAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATCTCAAGATCACCTGCATGGAATTTGGAAATGTCTACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAATAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX628556             [                                                                                                                                                                                                                                                                                                                                                                               gTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC T TTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCGCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGACGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTGCTTCCCACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS092IE             [                                                                                                                                                                                                                                                                                                                                                                                              GATGAATTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACC TCTTTCCCA TGCGTCTATGCCCTGAGGATGACACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGCAAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTA CTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTTACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAATGTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACAAGTGAATAAAAAAGTTCTAAGAGTCAATTAAG]
[-] EMBL CNS09PFP             [                                                                                                                                                                                                                                                                                                                                                                                                                                         taGGAAGCGCTAATGGTATGGTGAAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACCTT TTTCCCCATGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGC AAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTA CTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAATGTTCGACCAGTTAGTCATAAAAAAATAAAAAACCTTTCAATGTGAATGAACAAGTGAATAAAAAAG                  ]
[-] EMBL CNS08OK7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGACAACGATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTA CTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAATGTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACAAGTGAATAAAAAAGTTCTAAGgt         ]
[+] EMBL BX622206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATCGCCGCCTGCTCCCGTCACGGTTACGTACGATTGTACGACACAAGAGGACCGGCAAGACGACCGGTACAAGATTTCACCTCGTCTGACCCAGATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAAGAATCCAGAAGATAATGTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACNAGTGAATAAAAAAGTTCTAAGAGTCNATTAAG]
[-] EMBL AGA282516            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGGTGATTATCTGTATGCCGGAACGACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTACAAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTCACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATACCGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAAGCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAGGAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCCAAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAAGAATCCAGAAGATAATGTTCGACCAGT                                                                         ]




>consensus_8933#0
TTTTTCTTGTTTACTGTTGATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCG
TTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAG
TGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAA
AGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTG
CTCACAAAAACATCGAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATT
CTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATA
TCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATT
GTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTT
AGCGTCGGAGAAAACCTTTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTG
ACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTG
CTTTTTATGGCAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAAC
GATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGA
TTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCA
GATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACG
ACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTAC
AAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTC
ACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATAC
CGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAA
GCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAG
GAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCC
AAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAAT
GTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACAAGTGAATA
AAAAAGTTCTAAGAGTCAATTAAG

consensusID : consensus_8933#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATCGAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACCTTTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGCAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCT]

[+] EMBL BM598995             [CCGCCCACGCGTCCGCCCACGCGTCCGCGAAGAACTGATTCGTTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATCGAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACCTTTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGCAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGATCGGAATCT]




>consensus_8933#1
CCGCCCACGCGTCCGCCCACGCGTCCGCGAAGAACTGATTCGTTTAAAATTCTATAGAAA
AAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAGTGTCCCTCATATACGGAT
AGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAAAGAATCCACGTACATGAC
GACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTGCTCACAAAAACATCGAAG
ATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATTCTCATCGGACGCGCGAAT
CGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATATCCAATTTTGAAATTGGC
ACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATTGTGGTCGGAAGCGCTAAT
GGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTTAGCGTCGGAGAAAACCTT
TTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTGACCGGAGGCAAATTGTTG
AAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTGCTTTTTATGGCAAAAAAT
GTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAACGATGTGGTGTTTGTTGAT
CGGAATCT

consensusID : consensus_8933#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 147
fasta sequence

                              [CAAAGAAGAGAGCATATCCAATAGAGAAATGGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTGGCATAGTGGTCGGAAGCGCTAATGGTATGGTGCAAATCGTAAAGTACCCCGAACCTGTGAAGTAAAGCTACGGAGA]

[+] EMBL BX608168             [CAAAGAAGAGAGCATATCCAATAGAGAAATGGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTGGCATAGTGGTCGGAAGCGCTAATGGTATGGTGCAAATCGTAAAGTACCCCGAACCTGTGAAGTAAAGCTACGGAGA]




>consensus_8933#2
CAAAGAAGAGAGCATATCCAATAGAGAAATGGGCACCGATGAAGTAGTGGGCCTGGGCCG
AAGCAACGGTGGCATAGTGGTCGGAAGCGCTAATGGTATGGTGCAAATCGTAAAGTACCC
CGAACCTGTGAAGTAAAGCTACGGAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8933#0      TTTTTCTTGTTTACTGTTGATTGATGGTCGGCGTTGTTGCTAGAACGAAGAACTGATTCG 60
consensus_8933#1      ----------------CCGCCCACGCGTC--CGCCCACGCGTCCGCGAAGAACTGATTCG 42
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      TTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAG 120
consensus_8933#1      TTTAAAATTCTATAGAAAAAACCTGACCGCAAAATGAAATACGCATCGGTGAATGCCAAG 102
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      TGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAA 180
consensus_8933#1      TGTCCCTCATATACGGATAGCCATACATTATACGTCGGAGCTCATACAGGATCGTTTAAA 162
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      AGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTG 240
consensus_8933#1      AGAATCCACGTACATGACGACGATCCTTTTCGGCAGGTAAATCTTCAGCCCATTGAGCTG 222
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      CTCACAAAAACATCGAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATT 300
consensus_8933#1      CTCACAAAAACATCGAAGATCACCTGCATGGAATTTGGAAATGTCGACCGTACAGAGATT 282
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      CTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATA 360
consensus_8933#1      CTCATCGGACGCGCGAATCGGTGCGTAAAGGTGTTCGACTGTTCCAAAGAAGAGAGCATA 342
consensus_8933#2      --------------------------------------------CAAAGAAGAGAGCATA 16
                                                                  ****************

consensus_8933#0      TCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATT 420
consensus_8933#1      TCCAATTTTGAAATTGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTTGCATT 402
consensus_8933#2      TCCAATAGAGAAATGGGCACCGATGAAGTAGTGGGCCTGGGCCGAAGCAACGGTGGCATA 76
                      ******   ***** *************************************** **** 

consensus_8933#0      GTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTT 480
consensus_8933#1      GTGGTCGGAAGCGCTAATGGTATGGTGCAAATTGTAAAGTACCCCGAACCTGTGAAGTTT 462
consensus_8933#2      GTGGTCGGAAGCGCTAATGGTATGGTGCAAATCGTAAAGTACCCCGAACCTGTGAAGTAA 136
                      ******************************** *************************  

consensus_8933#0      AGCGTCGGAGAAAACCTTTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTG 540
consensus_8933#1      AGCGTCGGAGAAAACCTTTTCCGACTGCGTCTATGCCCTGAGGATGAAACGCGCATGGTG 522
consensus_8933#2      AGCTACGGAGA------------------------------------------------- 147
                      ***  ******                                                 

consensus_8933#0      ACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTG 600
consensus_8933#1      ACCGGAGGCAAATTGTTGAAACAAATCATCAAGCTATGGGATCTTGAGACGCAGAAGGTG 582
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      CTTTTTATGGCAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAAC 660
consensus_8933#1      CTTTTTATGGCAAAAAATGTGAAAAAAGTCCTAGAGTTGGAGCAACATGTTTGGGACAAC 642
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      GATGTGGTGTTTGTTGATCGGAATCTAATCGCCTCCTGCTCCCGTCACGGTTACGTACGA 720
consensus_8933#1      GATGTGGTGTTTGTTGATCGGAATCT---------------------------------- 668
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      TTGTACGACACAAGAGGACCGGCAAGGCGACCGGTACAAGATTTCACCTCGTCTGACCCA 780
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      GATGATCAGCTCGCATTTTCGTGTCTTACTTCCCACGGTGATTATCTGTATGCCGGAACG 840
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      ACTACCTTCGGCGCGAGAGCGTTCGATATACGTAGGATGAAAAATCACATCCATGTGTAC 900
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      AAAGGTTTTACCGGCACGGTTACATCTATTCGAGTTGATTCGTCTGGCAATCATTTGTTC 960
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      ACTGGTTGTCTCGATCGTTATGTGCGAGTTCATCATGCTCATCGTACGGCTCTAGAATAC 1020
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      CGATGCTACGTGAAATCGAAACCGACGCAGGTGTTGGGTATTGAATTTAAAGAACATCAA 1080
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      GCAAGTACTAATCAGGATGAAGTCAACAGCGATGATGATATTCAAATCGTAGCAAATGAG 1140
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      GAAGGGTCCGATCCAGAGTACGATGAAATGTTTTCAAAAATGAAGACTGTAAATGAATCC 1200
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      AAGGCAAAGACACCAATGAAACGTAAATCCATCTCTTCAACAAATAATCCAGAAGATAAT 1260
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      GTTCGACCAGTTAGTCATAAAAAAGTAAAAAACCTTTCAATGTGAATGAACAAGTGAATA 1320
consensus_8933#1      ------------------------------------------------------------
consensus_8933#2      ------------------------------------------------------------
                                                                                  

consensus_8933#0      AAAAAGTTCTAAGAGTCAATTAAG 1344
consensus_8933#1      ------------------------
consensus_8933#2      ------------------------