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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1510 fasta sequence
[TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTCCGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCG-AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCG-ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGGATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT]
[+] EMBL CNS09FKC [TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTCCGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCGAAGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGC ]
[+] EMBL CNS093HQ [ atTTTTAACACCACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACA GCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAA CCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGCCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTACGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGA ]
[-] EMBL CNS093HP [ TGTCGATTTTTTGGGCACCG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGAACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCG ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGGATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT]
[-] EMBL CNS09FKB [ CG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCGCGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCT ]
consensusID : consensus_8950#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1297 fasta sequence
[AGGAAGGGAACACCATTCAACGCCCTTTTGCATCATTTTAGCTTTCACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACAACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTGGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGAGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCCCTCCGGCCCCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGGACGCGTGGGCGG]
[+] EMBL CNS08M8V [AGGAAGGGAACACCATTCAACGCCCTTTTGCATCATTTTAGCTTTCACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACAACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTGGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGGGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTG ]
[-] EMBL CNS08M8U [ CTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTCGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGAGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACCCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTGCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGTGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGC ]
[-] EMBL BM622409 [ AGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCT CCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCgg ]
[-] EMBL BM620461 [ GTTATTCTAATCTTTTCCTCGGTGATTTGTTGTATGTAGTGGTAACACACACACAGACACGCAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTGTATGCACTCACGCACGCATTGTTCGGACCAAATTGCCTTTTCTTATTGTTTACGCTAGACTCCGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTATAAAT ]
[-] EMBL BM587574 [ CTCATTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCGTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGCCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTATGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCCCTCCGGCCCCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGGACGCGTGGGCGG]
consensusID : consensus_8950#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 715 fasta sequence
[TTCATCAACCGGCGGATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGGGCATTCCCGTCAGCATATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTAC-AATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCGAGCAGCACATTCTCCGGCTTCAGATCCCGATAGATGATGCCCAGATTGTGCAGATGCTCCAGGGCGAGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAAGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAAAGGGATGCCTAACCGCCTCTAATATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAACTATCGACGCCTTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCACCAGTGGTTTTTCTGACTTGGAAGACTTTACCGTATCCGCCTTTGCCTAATACTTTCTTTAGCCGG]
[-] EMBL BM653800 [TTCATCAACCGGCGGATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGGGCATTCCCGTCAGCATATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTAC AATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCGAGCAGCACATTCTCCGGCTTCAGATCCCGATAGATGATGCCCAGATTGTGCAGATGCTCCAGGGCGAGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAAGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAAAGGGATGCCTAACCGCCTCTAATATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAACTATCGACGCCTTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCACCAGTGGTTTTTCTGACTTGGAAGACTTTACCGTATCCGCCTTTGCCTAATACTTTCTTTAGCCGG]
[-] EMBL BX604331 [ TTCCCGTCAGCATATCAAACATGAGAGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACAAATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCc ]
consensusID : consensus_8950#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGCTACTTTACACCGAAACACACACACACACACACTCACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTTGTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAGCACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTCAGCGCGG]
[-] EMBL BM603326 [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGCTACTTTACACCGAAACACACACACACACACACTCACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTTGTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAGCACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTCAGCGCGG]
consensusID : consensus_8950#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence
[CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGTTACTTTACACCGACACACACACACACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTCGTTTAGAAGACGCTCAGAGCCGTAAAAAAGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAACACACACACACACACACACACACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCCGG]
[-] EMBL BM654983 [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGTTACTTTACACCGACACACACACACACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTCGTTTAGAAGACGCTCAGAGCCGTAAAAAAGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAACACACACACACACACACACACACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8950#0 TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTT 60
consensus_8950#1 ------------------------------------------------------------
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 TTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCA 120
consensus_8950#1 ------------------------------------------------------------
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 CATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACT 180
consensus_8950#1 -------------AGGAAGGGAACACCATTCA--ACGCCCTTTTGCATCATTTTAGCTTT 45
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 CTCAC----TCAG-CGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTG 235
consensus_8950#1 CACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACA 105
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 GTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGC 295
consensus_8950#1 ACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATG 165
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 CTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCC 355
consensus_8950#1 TTTCCACCGTTCTGGGAG-----ATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTT 220
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 TGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGG 415
consensus_8950#1 TTCCTACTAGC--GCTTATCGCCTGAGTGGAGCAGTTTAAA-------AACAATCAGCAA 271
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ---------------------------------------------TTCATCAACCGGCGG 15
consensus_8950#0 ATGAGATCGCGCGAGTCC-GGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTAT 474
consensus_8950#1 AGGAAAAGCTCCATAAAC-TGAGGGAAATAAAC--AAATGTAAAGTA-ATCCCTGGAGGA 327
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTAT 75
consensus_8950#0 AGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGG--GCATTCCCGTCAA---- 528
consensus_8950#1 AG---TGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGA 384
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 AGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGG--GCATTCCCGTCAG---- 129
consensus_8950#0 --CAT-GTCGAACATGAGGGCACCGAGCGACCACCAATCGACC-GCTTCCTGTGTCCGCT 584
consensus_8950#1 CTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTA 444
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 --CAT-ATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCT 186
consensus_8950#0 GCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTG----TGCGTTA 640
consensus_8950#1 ACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTT 504
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 GCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTG----TGCGTTA 242
consensus_8950#0 CTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGA 700
consensus_8950#1 CTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGA 564
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 CAATGCCCTCCTGGATGTGTTCCTTGCA-----------------------CAGGCCAAA 279
consensus_8950#0 CTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCAT 760
consensus_8950#1 CTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCAT 624
consensus_8950#3 ----------CCTGCTTCCTG---TGCACTGCACTCTTCTTTGC-GCTGTGGCTCTTTGC 46
consensus_8950#4 ----------CCTGCTTCCTG---TGCACTGCACTCTTCTTTGC-GCTGTGGCTCTTTGC 46
consensus_8950#2 ------GTCGGTCAGCTTCACG--TG-GCCCTTCGCATCGA-GCAGC-ACATTCTCCGGC 328
* ** * * ** ** **
consensus_8950#0 TTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGA 820
consensus_8950#1 TTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGA 684
consensus_8950#3 GCTACTTTACA--CCGAAACACACACACACACACACTCACACACTGC-TTGCTTTGATTT 103
consensus_8950#4 GTTACTTTACA--CCGACACACACACACACA----------CACTGC-TTGCTTTGATTT 93
consensus_8950#2 TTCAGATCCCG---ATAGATGATGCCCAGATTGT---------GCAGATGCTCCAGGGCG 376
* * * * * *
consensus_8950#0 CGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGAT 880
consensus_8950#1 CGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGAT 744
consensus_8950#3 TGATTCTTAATTCGTGAGCAGAGGATTTCACT-TTACGAAGGGTTTGCACACTTGTTT-T 161
consensus_8950#4 TGATTCTTAATTCGTGAGCAGAGGATTTCACT-TTACGAAGGGTTTGCACACTTGTTT-C 151
consensus_8950#2 AGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAA-ATATTCCCTCGCGC-T 434
** * * * * ** * * * * * *
consensus_8950#0 ACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCG 940
consensus_8950#1 ACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCG 804
consensus_8950#3 GTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTT 221
consensus_8950#4 GTTTAGAAGACGCTCAGAGCCGTAAAAAAGGG-CTGCCACGCACAAAATGAGGTAGGTTT 210
consensus_8950#2 CTAAATGCATGAA--CAGCTCGCCGCC--GCTCAAGTATTCTAGAATTAAATACAACTTG 490
* * * * * *
consensus_8950#0 GCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAA 1000
consensus_8950#1 GCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAA 864
consensus_8950#3 TTGTTT-CTGTGTTTGTTTGCCTGTAT-GTGCCGACA--CACCGTGCAGCACAC-ACACA 276
consensus_8950#4 TTGTTT-CTGTGTTTGTTTGCCTGTAT-GTGCCGACA--CACCGTGCAACACAC-ACACA 265
consensus_8950#2 CCACCGGTCTGGAAGGCGTACACTAGCTCTAC-GATAAAGGGATGCCTAACCGCCTCTAA 549
* * * * * * * *
consensus_8950#0 CACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCT 1060
consensus_8950#1 CACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCT 924
consensus_8950#3 CACACACACACACACACACAC--------------------TGTTAA--------CTTTC 308
consensus_8950#4 CACACACACACACACACACACACACACACACACACACACACTGTTAA--------CTTTC 317
consensus_8950#2 TATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAA------------- 596
* * * * *
consensus_8950#0 GCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGAT 1120
consensus_8950#1 GCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGCGGAT 984
consensus_8950#3 GCT-CTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACAC 367
consensus_8950#4 GCT-CTATTGCTGAAGGTTTTTTTTT-TTTGTTTTCTTTTGCACAAACGTGTGTGCACAC 375
consensus_8950#2 ----CTATCGACGCC--TTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCAC 650
** * * ** * * * *
consensus_8950#0 GATGGTTGTGCATGTTTTGATGCGGGGCCATCTT-CCAGGCGCCACTGCTCCCACTGCCA 1179
consensus_8950#1 GATGGTTGTGCATGTTTTGATGCGGGGCCATCTT-CCAGGCGCCACTGCTCCCACTGCCA 1043
consensus_8950#3 ACT--TTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCT- 424
consensus_8950#4 ACT--TTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCT- 432
consensus_8950#2 CA-----GTGGTTTTTCTGACTTGGAAG-ACTTTACCGTATCCGCCTTTGCCTAATACTT 704
* * ** * * * *
consensus_8950#0 TTCTCCATCGGCGTTGCTCCTGTCGCTC-CGGCCGCGCCCATCATTCGACTGCTGCCGGC 1238
consensus_8950#1 TTCTCCATCGGCGTTGCTCCTGTCCCTC-CGGCCCCGCCCATCATTCGACTGCTGCCGGC 1102
consensus_8950#3 TCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCAC 484
consensus_8950#4 TCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCAC 492
consensus_8950#2 TCTTTAGCCGG------------------------------------------------- 715
* *
consensus_8950#0 ACCGTGGTGGTGGTGGTGCG-ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAG 1297
consensus_8950#1 ACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAG 1162
consensus_8950#3 ACCGCAAC--TCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTC 542
consensus_8950#4 ACCGCAAC--TCGCAATCTGCCGG------------------------------------ 514
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 GTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTC 1357
consensus_8950#1 GTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTC 1222
consensus_8950#3 AGCGCGG----------------------------------------------------- 549
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 CAGAA---ATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTC 1414
consensus_8950#1 CAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAG 1282
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 TAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGG 1474
consensus_8950#1 CGGACGCGTGGGCGG--------------------------------------------- 1297
consensus_8950#3 ------------------------------------------------------------
consensus_8950#4 ------------------------------------------------------------
consensus_8950#2 ------------------------------------------------------------
consensus_8950#0 ATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT 1510
consensus_8950#1 ------------------------------------
consensus_8950#3 ------------------------------------
consensus_8950#4 ------------------------------------
consensus_8950#2 ------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||