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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1357 fasta sequence
[ACCCACGCGTCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGTCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA-TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACAGTCGAGTGGA]
[+] EMBL BM612911 [ACCCACGCGTCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGTCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTAC ]
[+] EMBL CNS08TSO [ CGGTACCCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACCGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGACATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCA CCTGCTGAGTGGGCTGCTGGTGAAAAAAAAAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGACATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAGGCGCATCACGCCCCCGTTCAAGCCGCA GTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATAT ]
[-] EMBL CNS08WOH [ CCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGAC ]
[-] EMBL CNS08FA3 [ GGAAAAGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATTTTAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACAGTCGAGTGGA]
[-] EMBL CNS0906E [ AGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTTACGAGCTAAAATTTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTTACAATC ]
[-] EMBL CNS08TSP [ CAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAAAAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCG ]
consensusID : consensus_8967#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1009 fasta sequence
[TGTGTGTGTGTTTTTTTTTAATTAAATTTATCTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAGTAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCCTTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAGATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTTTTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTGCTGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTTCTTCTCACGGCAGCAGCACTACTTGGGAGCTGTGTCCTTTAATAATAATACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTTTACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAGGAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG]
[+] EMBL CNS099CW [TGTGTGTGTGTTTTTTTTTAATTAAATTTATCTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAGTAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCCTTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAGATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTTTTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTGCTGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTTCTT ]
[-] EMBL CNS099CV [ TTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTG TGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCTCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTGCTTCTCACGGCAGCAGCACTACTTGGGAGCTGTGTCCTTTAATAATAATACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTTTACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAGGAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG]
consensusID : consensus_8967#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 759 fasta sequence
[AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCTACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTC]
[+] EMBL CNS08FA2 [AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCTACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTC]
[+] EMBL CNS08WOG [ GAC GAGGTGG CCACACGATGGCCGAGAGTCGCGTGCTCAAGAAGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTAC ]
consensusID : consensus_8967#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 677 fasta sequence
[CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACAGACAGACAAACAGACCCACCTGAATATTAACTCTCTAGCAGGAGCAGGAAAGGTAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGCACTTTTAGTTGCCTTTCTTATCATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAAATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCTCGTCACGAAGAATGGAAGCGATTTTGATCGTACTTGCGCGAGATTCCTTGAGCGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAGTTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGTAAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACTATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA]
[+] EMBL BM630354 [CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACAGACAGACAAACAGACCCACCTGAATATTAACTCTCTAGCAGGAGCAGGAAAGGTAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGCACTTTTAGTTGCCTTTCTTATCATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAAATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCTCGTCACGAAGAATGGAAGCGATTTTGATCGTACTTGCGCGAGATTCCTTGAGCGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAGTTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGTAAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACTATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA]
consensusID : consensus_8967#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGTGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACTTTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGAAGGGTGAGTGTGGGACCTGGACACCAGACACTGCGCCTTCTTTGGAAACCCTGTAATTCGTAACAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA]
[+] EMBL BM621161 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGTGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACTTTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGAAGGGTGAGTGTGGGACCTGGACACCAGACACTGCGCCTTCTTTGGAAACCCTGTAATTCGTAACAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA]
consensusID : consensus_8967#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence
[CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGCGTTTGCCAGCGAGAATCCTTTGTATCTCTTCCTGCTACTAGCATACACGCGCACGGGGGAGCGCGTTCGATTAGCATTATTACTTATTATTATTACCTTTGCGCGACTCTACACACACACACACACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTGAACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATCCGTGACCACCGTAGTGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAGCGC]
[+] EMBL BX468722 [CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGCGTTTGCCAGCGAGAATCCTTTGTATCTCTTCCTGCTACTAGCATACACGCGCACGGGGGAGCGCGTTCGATTAGCATTATTACTTATTATTATTACCTTTGCGCGACTCTACACACACACACACACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTGAACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATCCGTGACCACCGTAGTGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8967#0 ------------------------------------------------------------
consensus_8967#2 AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCG 60
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 ------------------------------------------------------------
consensus_8967#2 TTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAG 120
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 ------------------------ACCCACGCGT-CCGCGAACGCATATTCCCCGAGGAT 35
consensus_8967#2 TACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGAT 180
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 -----------------------------TGTGTGTGTGTTTTTTTTTAATTAAATTTAT 31
consensus_8967#0 CGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGC 95
consensus_8967#2 CGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGC 240
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ----CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACA 56
consensus_8967#5 ---------CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGC- 50
consensus_8967#1 CTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAG 91
consensus_8967#0 ATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGAC----GGCCACAT 151
consensus_8967#2 ATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGAC----GGCTACAT 296
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 GACAGACAAACAGACCC---ACCTGAATATTAACTCTCTAGCAGGAGC----AGGAAAGG 109
consensus_8967#5 GTTTGCCAGCGAGAATC---CTTTGTATCT---CTTCCTGCTACTAGC----ATACACGC 100
consensus_8967#1 TAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCC 151
consensus_8967#0 CAAGATCGCCGACTTTGGCCT-GTGCAAGGAGGACATCACGTACGGCCGGACGACG-AAA 209
consensus_8967#2 CAAGATCGCCGACTTTGGCCT-GTGCAAGGAGGACATCACGTACGGCCGGACGACG-AAA 354
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 TAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGC-ACTTTTAGTTGCCTTTCT-TAT 167
consensus_8967#5 --GCACGGGGGAGCGCGTTC-----GATTAGCATTATTACTTATTATTATTACCTT-TGC 152
consensus_8967#1 TTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAG 211
consensus_8967#0 ACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGT 269
consensus_8967#2 ACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGC 414
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 CATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAA 227
consensus_8967#5 GCGACTCTACACACACACACA-CACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTG 211
consensus_8967#1 ATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTT 271
consensus_8967#0 CACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTG 329
consensus_8967#2 CACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTG 474
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCT 287
consensus_8967#5 AACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATC- 270
consensus_8967#1 TTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTAT 331
consensus_8967#0 CCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAG 389
consensus_8967#2 CCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAG 534
consensus_8967#4 ---------------------------CCGCCCACGCGTCCGCCCACGCGTCCG------ 27
consensus_8967#3 CGTCACGAAGAATGGAA--GCGATTTTG-ATCGTACTTGCGCGAGATTCCTTGAG----- 339
consensus_8967#5 ---CGTGACCACCGTAG--TGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAG----- 320
consensus_8967#1 CGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGC---TCGTGCTTTACTCGATCTCG 388
consensus_8967#0 TTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAAT 449
consensus_8967#2 TTCCCGCGCAACATCAGCCCGAACGCGCGCAGC-TGCTGAGCGGGCTGCTGGTGAAAAAT 593
consensus_8967#4 --CCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAAT 85
consensus_8967#3 ----CGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAG 395
consensus_8967#5 ----CGC----------------------------------------------------- 323
consensus_8967#1 ATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCG 448
*
consensus_8967#0 CCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTC 509
consensus_8967#2 CCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTC 653
consensus_8967#4 CCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTC 145
consensus_8967#3 AGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAG 455
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 TGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCC 508
consensus_8967#0 TTTGCCAGCATCAACTGGACGGA-TCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCC 568
consensus_8967#2 TTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCC 713
consensus_8967#4 TTTGCCAGCATCAACTGGACGGA-TCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCC 204
consensus_8967#3 TTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGT 515
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 TCTTCCGCCAAGAGCACACAGCATTTGCGCGCCA-ATTTCTACATGCCTATATGCTGCCT 567
consensus_8967#0 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGATCGGGAGTTCACCGGCGAGAGCG 627
consensus_8967#2 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGATCGGGAGTTC------------- 759
consensus_8967#4 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGACCGGGAGTTCACCGGCGAGAGTG 263
consensus_8967#3 AAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATC 575
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ATAGGCCA-GGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTA 626
consensus_8967#0 TGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAGGAACCACACT 687
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 TGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACT 323
consensus_8967#3 CTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACT 635
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 TTAACTTCATGCTATCACAGCCCGTTG--CTTTCTAATCTTGCGTCATTGAGCGCGCACG 684
consensus_8967#0 TTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACC 747
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 TTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACC 383
consensus_8967#3 ATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA------------------ 677
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 TTGCGTCACTTGCTGCGCGCGCACCAGCTT--ATCGTCTATAAAAGCAGCTTCTATATTA 742
consensus_8967#0 ACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGA 807
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGA 443
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 802
consensus_8967#0 GTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGG 867
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 GTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGG--AAGGGTGAGTGTGGG--ACCTGG 499
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 CTTTTTA-GCGTGTTTTCTTCTCACGGCAGCAGCA--CTACTTGGGAGCTGTGTCCTTTA 859
consensus_8967#0 ACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGT 927
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ACACCAGACAC------TGCGCCTTCTTTGGA-AACCCTGTAATTCGTAACAAAAAGAGG 552
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ATAATAA----------TACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTT 909
consensus_8967#0 ACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGG 987
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 CCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATC----CTTTGTTCTCTTCCTG 608
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 TACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAG 969
consensus_8967#0 TGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCG 1047
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 CTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA---- 664
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 GAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG-------------------- 1009
consensus_8967#0 GCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGA 1107
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 AGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAG 1167
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 CGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGA 1227
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 TTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTC 1287
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 CCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACA 1347
consensus_8967#2 ------------------------------------------------------------
consensus_8967#4 ------------------------------------------------------------
consensus_8967#3 ------------------------------------------------------------
consensus_8967#5 ------------------------------------------------------------
consensus_8967#1 ------------------------------------------------------------
consensus_8967#0 GTCGAGTGGA 1357
consensus_8967#2 ----------
consensus_8967#4 ----------
consensus_8967#3 ----------
consensus_8967#5 ----------
consensus_8967#1 ----------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||