cluster # 8993

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Anopheles gambiae
cluster # 8993 cluster # 8993 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8993#0 length = 1864 sequences # 12

consensus_8993#1 length = 710 sequences # 1

consensusID : consensus_8993#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1864
fasta sequence

                              [CCGCCCACGCGTCCGAGAAAAGCAGCCTGAAGTGGCTTGCGAAACCAGCGGCGGTGGAATCCCATCTCGCCCATCGGAGGAACGAACGTCGGATAATATTAACAGCAGTCAACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCACTGCCGAACAGGCTACACTACCTCCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCATCGTAAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGGCGAACCGGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCCAAGGTGCTGCTGTCGCTGAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATG-AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG-AGG-CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCTACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCAGCACGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAACACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCACGTGCAGGAATCGGATTGGAT--G-GCAAACGGGTCCAACTACCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGGACTTACCGCAACATTGCAACGAGTGGTACGATGATCGCGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACAT-CGTTTCCAATGGTTCGGACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAGTGTAGCACGTCTGACCGAATGGGACAACACACTGCGCGAGCAGGAGTTGAGCCAGCTGGAACGACTGCAGAACATGTTGCGGCGATGAGAGAGGTGGTGTGCGTGTGGTG-G-TTTCGCGAAAGAACCCCACACACCGGTTCATGAGAGTTGGTAGCAGAAATACA-GCGCACATGAAAGTGTACGATAAATAAAA]

[+] EMBL BM638048             [CCGCCCACGCGTCCGAGAAAAGCAGCCTGAAGTGGCTTGCGAAACCAGCGGCGGTGGAATCCCATCTCGCCCATCGGAGGAACGAACGTCGGATAATATTAACAGCAGTCAACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCACTGCCGAACAGGCTACACTACCTCCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCATCGTAAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGGCGAACCGGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCCAAGGTGCTGCTGTCGCTGAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCCATG AGTAAACTACTGGAGAATTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX603413             [                                                                                                                                    TTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCACTGCCGAACAGGCTACACTACCTCCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCATCGTAAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGGCGAACCGGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCCAAGGTGCTGCTGTCGCTGAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATG AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG AGG CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCCATGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM591171             [                                                                                                                                                                                                                                                                                                                                                                                                                                ccgGCGAGTTTCTTAACTAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATG AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG AGG CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCTACGCAACATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX606445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATG AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG AGG CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08K4A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATGCAGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCGCAGGCCATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08HHR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATG AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG AGG CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCCACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCAACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCAGCACGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAACACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCACGTGCAGGAATCGGATTGGAT  G GCAAACGGGTCCAACTACCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGGACTTACCGCAACATTG                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX606119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCTGGTATCTTCACAACATTTGCCAATG AGTAAACTACTGGAGAATTGGTCCAATGCAAACCAGGCAAACATTGCG AGG CATCGCCGCAAATTGAACATTCTGCTGTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCATCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCTACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX607000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCTACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCAGCACGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAACACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCACGTGCAGGAATCGGATTGGATTGGAGCAAACGGGTCCAACTACCAGCAA      CAGCAGCAGCAGCAGCAGCAGGACTTTCCGCAACATGGCAACGAGTGGTACGATGATCGCGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACAT CGTT                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08HHS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATCATAAAGATTATGCCACATTGGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGTTCAACAACGACCACTAAAAG TGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCCAACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCAGCACGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAAAACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCACGTGCAGGAATCGGATTGGAT  G GCAAACGGGTCCAACTACCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGGACTTACCGCAACATTGCAACGAGTGGTACGATGATCGCGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACAT CGTTTCCAATGGTTCGGACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAGTGTAGCACGTCTGACCGAATGGGAC                                                                                                                                                                           ]
[+] EMBL AGA285250            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCA       GAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAACACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCACGTGCAGGAATCGGATTGGATTGGAGCAAACGGGTCCAACTACCAGCAACAGCAGCAGCAGCAGCAGCAGgacttt                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL AGA283953            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AACGGGTCCAACTACCAGCAA      CAGCAGCAGCAGCAGCAGCAGGACTTTCCGCAACATGGCAACGAGTGGTACGATGATCGCGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACAT CGTTTCCAATGGTTCGGACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAGTGTAGCACGTCTGACCGAATGGGACAACACACTGCGCGAGCAGGAGTTGAGCCAGCTGGAACGACTGCAGAACATGTTGCGGCGATGAGAGAGGTGGTGTGCGTGTGGTGTGCTTTCGCGAAAGAACCCCACACACCGGTTCATGAGAGTTGGTAGCAGAAATACAGGCGCACATGAAAGTGTACGATAAATAAAA]
[-] EMBL CNS08K4B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCGCGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACATGCGTTTCCAATGGTTCGGACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAGTGTAGCACGTCTGACCGAATGGGACAACACACTGCGCGAGCAGGAGTTGAGCCAGCTGGAACGACTGCAGAACATGTTGCGGTGATGAGAGAGGCGGTGTGCTGGTGGTG G TTTCGCGAGAGAAACCCACACACCGGTTCATGAGAGTTGGTAGCAGAAATACA GCGCTCATGAA                  ]




>consensus_8993#0
CCGCCCACGCGTCCGAGAAAAGCAGCCTGAAGTGGCTTGCGAAACCAGCGGCGGTGGAAT
CCCATCTCGCCCATCGGAGGAACGAACGTCGGATAATATTAACAGCAGTCAACAAGCAGC
GCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACT
ACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCAC
TGCCGAACAGGCTACACTACCTCCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCAT
CGTAAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGGCGAACCGGTCGAAAC
GGATGCCAAAGTGGTGCTCAGCAAAGACCATGCCAAGGTGCTGCTGTCGCTGAAGGGTAG
CGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATC
GGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGA
GTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAACAACAACAT
CGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAGAGGTCATTT
AAAGCAGCTGGTATCTTCACAACATTTGCCAATGAGTAAACTACTGGAGAATTGGTCCAA
TGCAAACCAGGCAAACATTGCGAGGCATCGCCGCAAATTGAACATTCTGCTGTTCGGTGT
GTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATTGGCATTATG
TTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACATCGTAAATGA
AGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATTGGCCGACGA
GTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGATTTGGAAGT
TCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTGTAAACGCCC
TACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAAAAAACAGCC
ACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACCTCGCACCAG
GTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCAGGAGCAGCA
CGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGATACCGATGC
GACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCATTATGAACAC
GTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTCAACGCGCCA
CGTGCAGGAATCGGATTGGATGGCAAACGGGTCCAACTACCAGCAACAGCAGCAGCAGCA
GCAGCAGCAGCAGGACTTACCGCAACATTGCAACGAGTGGTACGATGATCGCGATCAAAA
CCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACATCGTTTCCAATGGTTCGG
ACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAGTGTAGCACG
TCTGACCGAATGGGACAACACACTGCGCGAGCAGGAGTTGAGCCAGCTGGAACGACTGCA
GAACATGTTGCGGCGATGAGAGAGGTGGTGTGCGTGTGGTGGTTTCGCGAAAGAACCCCA
CACACCGGTTCATGAGAGTTGGTAGCAGAAATACAGCGCACATGAAAGTGTACGATAAAT
AAAA

consensusID : consensus_8993#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence

                              [CCGATAGAACCTAAGGAGGAAGAGATGTCCCCGCAGGTCACACCAGCGCCATGCAACCAAACTGACAGCCAACGAGCTGCTCTAACGATAGTGGAAGAAAATTCCAACTACAGTTTTTCCGAGTTTCATACCGAAGAAGAAAAGCAGCCCGAAGTGGCTTGCGAAACCAGCGGCGGTGGCATCACATCTCGCCCATCGGAGGATCGAACGTCAGCTAATATTAACAGCAGCCAAAGTCAACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCACTGCCGAACAGGCTTCACTACCTTCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCATCGTGAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGACGAACCGGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCAAAGCTGCTGCTGTCGCTGAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTTAT]

[+] EMBL BM636221             [CCGATAGAACCTAAGGAGGAAGAGATGTCCCCGCAGGTCACACCAGCGCCATGCAACCAAACTGACAGCCAACGAGCTGCTCTAACGATAGTGGAAGAAAATTCCAACTACAGTTTTTCCGAGTTTCATACCGAAGAAGAAAAGCAGCCCGAAGTGGCTTGCGAAACCAGCGGCGGTGGCATCACATCTCGCCCATCGGAGGATCGAACGTCAGCTAATATTAACAGCAGCCAAAGTCAACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATCCTACCCACTGCCGAACAGGCTTCACTACCTTCGCCGCAACAGACGCCGGAACCGCCAGCAAATACCATCGTGAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGACGAACCGGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCAAAGCTGCTGCTGTCGCTGAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACGTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTTCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTTAT]




>consensus_8993#1
CCGATAGAACCTAAGGAGGAAGAGATGTCCCCGCAGGTCACACCAGCGCCATGCAACCAA
ACTGACAGCCAACGAGCTGCTCTAACGATAGTGGAAGAAAATTCCAACTACAGTTTTTCC
GAGTTTCATACCGAAGAAGAAAAGCAGCCCGAAGTGGCTTGCGAAACCAGCGGCGGTGGC
ATCACATCTCGCCCATCGGAGGATCGAACGTCAGCTAATATTAACAGCAGCCAAAGTCAA
CAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCTA
TTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAATC
CTACCCACTGCCGAACAGGCTTCACTACCTTCGCCGCAACAGACGCCGGAACCGCCAGCA
AATACCATCGTGAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGACGAACCG
GTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCAAAGCTGCTGCTGTCGCTG
AAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAACG
TTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTTT
CATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8993#0      ------------------------------------------------------------
consensus_8993#1      CCGATAGAACCTAAGGAGGAAGAGATGTCCCCGCAGGTCACACCAGCGCCATGCAACCAA 60
                                                                                  

consensus_8993#0      ------------------------------------------------------------
consensus_8993#1      ACTGACAGCCAACGAGCTGCTCTAACGATAGTGGAAGAAAATTCCAACTACAGTTTTTCC 120
                                                                                  

consensus_8993#0      ---CCGCCCACGCGTCCGAGAAAAGCAGCCTGAAGTGGCTTGCGAAACCAGCGGCGGTGG 57
consensus_8993#1      GAGTTTCATAC-CGAAGAAGAAAAGCAGCCCGAAGTGGCTTGCGAAACCAGCGGCGGTGG 179
                            *  ** **    ************ *****************************

consensus_8993#0      AATCCCATCTCGCCCATCGGAGGAACGAACGTCGGATAATATTAACAGCAG------TCA 111
consensus_8993#1      CATCACATCTCGCCCATCGGAGGATCGAACGTCAGCTAATATTAACAGCAGCCAAAGTCA 239
                       *** ******************* ******** * ***************      ***

consensus_8993#0      ACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCT 171
consensus_8993#1      ACAAGCAGCGCTCTCTCTTGATTTTATTCCACTTTCTACTGAGCCTGAAGTGCCGGATCT 299
                      ************************************************************

consensus_8993#0      ATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAAT 231
consensus_8993#1      ATTTACACTACCACCACTGCCACCCAGACCGCCGCGACCACAGCGACCGCCGCTGCCAAT 359
                      ************************************************************

consensus_8993#0      CCTACCCACTGCCGAACAGGCTACACTACCTCCGCCGCAACAGACGCCGGAACCGCCAGC 291
consensus_8993#1      CCTACCCACTGCCGAACAGGCTTCACTACCTTCGCCGCAACAGACGCCGGAACCGCCAGC 419
                      ********************** ******** ****************************

consensus_8993#0      AAATACCATCGTAAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGGCGAACC 351
consensus_8993#1      AAATACCATCGTGAGAGCTGCTGAACCGGATCGTTCAATAATGCCAAAGGCGGACGAACC 479
                      ************ **************************************** ******

consensus_8993#0      GGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCCAAGGTGCTGCTGTCGCT 411
consensus_8993#1      GGTCGAAACGGATGCCAAAGTGGTGCTCAGCAAAGACCATGCAAAGCTGCTGCTGTCGCT 539
                      ****************************************** *** *************

consensus_8993#0      GAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAAC 471
consensus_8993#1      GAAGGGTAGCGAGTTTCTTAACGAGGCCGGCCAAAGGCACAACGTGCGGTTAAGCATAAC 599
                      ************************************************************

consensus_8993#0      GTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTT 531
consensus_8993#1      GTTCGAATCGGTCGGCAATATGTTGCAAATTCACGGCACAACCGAGGCGCAGGACCGGTT 659
                      ************************************************************

consensus_8993#0      TCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTAATTGCAGACAA 591
consensus_8993#1      TCATGAGGAGTTGGTGCGCTACCTGTCGGGCGGTACGCAGCAAAAAGTTAT--------- 710
                      ************************************************ **         

consensus_8993#0      CAACAACATCGAAATTAGCAACTGTCCTAAGCTTTCAAACAAAATGGCGAAATACATCAG 651
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      AGGTCATTTAAAGCAGCTGGTATCTTCACAACATTTGCCAATGAGTAAACTACTGGAGAA 711
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TTGGTCCAATGCAAACCAGGCAAACATTGCGAGGCATCGCCGCAAATTGAACATTCTGCT 771
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      GTTCGGTGTGTATGGAATGCGGGAAGGACGAAAGTACCTCAATGTACTGCGAACCCAATT 831
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      GGCATTATGTTTGCAAACGAAGCCACGGGACAGTGAGGTCCCGCAAGCTCAGCGTGACAT 891
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      CGTAAATGAAGCGATTCGGTACATATTTACGGGATACGATCATAAAGATTATGCAACATT 951
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      GGCCGACGAGTTTGAGGAACTTAAGCATTCAAACAAGTTGAGAAGGATAACATTCTTTGA 1011
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TTTGGAAGTTCAACAACGACCACTAAAGGCTGACGCCGTAAATAAAAATAAAACCTGCTG 1071
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TAAACGCCCTACGCAACATGCAGCCGATTACCATTACCTAAAGTTTATTGAAACTCTGAA 1131
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      AAAACAGCCACAGAAAAAGCAAAACAAGTCGCCAATCGTGAAAAAAGACGCGAAAAAACC 1191
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TCGCACCAGGTCTAACAGTATAGCAGAGAAACGGGCCCAACTAGACTGGAATCACCACCA 1251
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      GGAGCAGCACGAGGAGCAACGTTTCAATCAAGAAGAACAGCAAGCCGACGATTACATTGA 1311
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TACCGATGCGACGATGCATCATAATGGTGAGGGCAATAGGAGGTATGCCGATGATTTCAT 1371
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TATGAACACGTACGCCGATCAGCAGATTGATTCGGATCGTCTCGACCAGCTGGACAGCTC 1431
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      AACGCGCCACGTGCAGGAATCGGATTGGATGGCAAACGGGTCCAACTACCAGCAACAGCA 1491
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      GCAGCAGCAGCAGCAGCAGCAGGACTTACCGCAACATTGCAACGAGTGGTACGATGATCG 1551
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      CGATCAAAACCGGTGGGCAGTGTTCGATAGCACGCCACCACAGACGGAACATCGTTTCCA 1611
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      ATGGTTCGGACAGTCGAACGACGTGGGCCCTAGCGGTCCGTCGGGTGCTTTTCCCGCTAG 1671
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      TGTAGCACGTCTGACCGAATGGGACAACACACTGCGCGAGCAGGAGTTGAGCCAGCTGGA 1731
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      ACGACTGCAGAACATGTTGCGGCGATGAGAGAGGTGGTGTGCGTGTGGTGGTTTCGCGAA 1791
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      AGAACCCCACACACCGGTTCATGAGAGTTGGTAGCAGAAATACAGCGCACATGAAAGTGT 1851
consensus_8993#1      ------------------------------------------------------------
                                                                                  

consensus_8993#0      ACGATAAATAAAA 1864
consensus_8993#1      -------------