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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9005#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2451 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGGCGGGCAGGAAGGGACGGCCGCCGGCGGCGAGCTGATGAAGAAGCCGGCCGGCCCGCTCACCAAGCGCGTCCGCAAGCTGTCCCGCTCGAACAGCAAGGACGGCGTGCTGGGGGTGGCCGGCACGCCCAACTTCGTCGCACCGCACCGGAAGTGGAAGAACAGCCGCCGGTCGCGGAACGGGTACGGGCGCGGCCTGCCCAAGAAGGGGGGCGCGGGCGGCAAGGGCGTGTGGGGCAAGCCGGGTTCGGAGGAGGTGTACGACGAGCTGGACGAGGACCCGAACGATCCGAACTTCGACATCGACGCGTACAACAGCTCGCACAACGTGGAGCTGAAGGAGATCGTGCCGCAGCCGACCGAGGCCGAGGTGGCCAAAAAGCTCGAGACGATCATACTGGAGTACTTCGAGCACGGGGATACGCGCGAGGTGGCGGACGCGCTGGACGAGCTGCTGCCGCCCGGCCTGAAGCCGCTGGTGACGAAAACG-TTCGTGTCGGTTGCGCTCGAGCACAAGCAGTCGCAGCGCGAGC-TGACCT-CGGTGCTGATGTCGGACCTGTACGGGCGCATCGTGACGCGCGAGGATA-TTTG-CGCA-GGGTTCGATCTGCTGCTGGCCAACCTGGCCGACATCATGCTGGACACGCCGGACGCGCCCCATCTGCTCGGCAACTTCATTGCGCGGGCCGTCGCGGACGACTGCATTCCGCCCAAGTACGCGTACCAGTCGGAGCGGGAGGACCTGGACCGGCACGGGCAGGCGGCGCTCGTGCGCGCCACCACGCTGCTCTCGATGCACGACGGCTGGGGCCAGCTCGACAACGTCTGGGGGGTCGGTGGTGCCCTCCGGCCGGTGCAGACGATCACGCAGCAGATGTCCTATCTGCTGCAGGAGTACCTGCTCTCACGCGATCTCAGCGAAGCCCAGCGCTCCATCAAGGAGCTTGAGGTGCCGCACTTCCACCACGAACTGATTTACGAGG-CAATCATAATGACGCTGGAGGCGTTCAACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACAGTACCTGCATCGTGACGCCG-GAGCA-G-A-TGGAGCAAGGGTTCCGGCGCGTCTACGAGGACATGACCGACATCGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCGCGCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCGTTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTAAAATGTGGGTGTGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCG-CCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAAATTAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACG--GAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCG-TTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAGAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTC-TTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTC-TTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGG-ACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCTTATTAAACAAAAAAAAAAAACACTAAACTTAAC-CGTGAGTCGGAATTTGCGCGAAATCTGTGTGTGGGACGAGAGATTGTCCTTTTCGCTTCGTTTTTGGTTGTTTTTGTTTTCTTCCTTTTTTCTATTGCACTAATTAATTGTGAAAAGAATATTTTTGGGTTTATTTTTTTATATTTTTACTGTACTGAATATTCACATCGTGGGCGCGCAATTAATTTTTGTTTGCTGAGAGGAAGAGTCGCTAAGGTTACGGATTAACACAAAGCTTAAAAGGACGCAAATATTTGACGGCAAACACACTCGTACGGCAGAATGCATAAATGCATATAATACATAAATTACGCGAGGCGAAATGAACTGAACCCCCCCATCAATGATGAGTCCATCATCATTCCCCCT]
[+] EMBL BM615541 [CCGCCCACGCGTCCGCCCACGCGTCCGGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGGCGGGCAGGAAGGGACGGCCGCCGGCGGCGAGCTGATGAAGAAGCCGGCCGGCCCGCTCACCAAGCGCGTCCGCAAGCTGTCCCGCTCGAACAGCAAGGACGGCGTGCTGGGGGTGGCCGGCACGCCCAACTTCGTCGCACCGCACCGGAAGTGGAAGAACAGCCGCCGGTCGCGGAACGGGTACGGGCGCGGCCTGCCCAAGAAGGGGGGCGCGGGCGGCAAGGGCGTGTGGGGCAAGCCGGGTTCGGAGGAGGTGTACGACGAGCTGGACGAGGACCCGAACGATCCGAACTTCGACATCGACGCGTACAACAGCTCGCACAACGTGGAGCTGAAGGAGATCGTGCCGCAGCCGACCGAGGCCGAGGTGGCCAAAAAGCTCGAGACGATCATACTGGAGTACTTCGAGCACGGGGATACGCGCGAGGTGGCGGACGCGCTGGACGAGCTGCTGCCGCCCGGCCTGAAGCCGCTGGTGACGAAAACGTTTCGTGTCGGTTGCGCTCGAGCACAAGCAGTCGCAGCGCGAGCATGACCTCCGGTGCTGATGTCGGACCTGTACGGGCGCATCGTGACGCGCGAGGATATTTTGCCGCA GGGTTCGATCTGCTGCTGGCCAACCTGGCC ]
[+] EMBL BX621684 [ ACGTGGAGCTGAAGGAGATCGTGCCGCAGCCGACCGAGGCCGAGGTGGCCAAAAAGCTCGAGACGATCATACTGGAGTACTTCGAGCACGGGGATACGCGCGAGGTGGCGGACGCGCTGGACGAGCTGCTGCCGCCCGGCCTGAAGCCGCTGGTGACGAAAACG TTCGTGTCGGTTGCGCTCGAGCACAAGCAGTCGCAGCGCGAGC TGACCT CGGTGCTGATGTCGGACCTGTACGGGCGCATCGTGACGCGCGAGGATA TTTG CGCA GGGTTCGATCTGCTGCTGGCCAACCTGGCCGACATCATGCTGGACACGCCGGACGCGCCCCATCTGCTCGGCAACTTCATTGCGCGGGCCGTCGCGGACGACTGCATTCCGCCCAAGTACGCGTACCAGTCGGAGCGGGAGGACCTGGACCGGCACGGGCAGGCGGCGCTCGTGCGCGCCACCACGCTGCTCTCGATGCACGACGGCTGGGGCCAGCTCGACAACGTCTGGGGGGTCGGTGGTGCCCTCCGGCCGGTGCAGACGATCACGCAGCAGATGTCCTATCTGCTGCAGGAGTACCTGCTCTCACGCGATCTCAGCGAAGCCCAGCGCTCCATCAAGGAGCTTGAGGTGCCGCACTTCCACCACGAACTGATTTACGAGG CAATCATAATGACGCTGGAGGCGTTCAACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACAGTACCTGCA ]
[+] EMBL AL929917 [ gcccGAGGTTAGA CTGTACGGGCGCATCGTGACGCGCGAGGATA TTTG CGCAGGGGTTCGATCTGCTGCTGGCCAACCTGGCCGACATCATGCTGGACACGCCGGACGCGCCCCATCTGCTCGGCAACTTCATTGCGCGGGCCGTCGCGGACGACTGCATTCCGCCCAAGTACGCGTACCAGTCGGAGCGGGAGGACCTGGACCGGCACGGGCAGGCGGCGCTCGTGCGCGCCACCACGCTGCTCTCGATGCACGACGGCTGGGGCCAGCTCGACAACGTCTGGGGGGTCGGTGGTGCCCTCCGGCCGGTGCAGACGATCACGCAGCAGATGTCCTATCTGCTGCAGGAGTACCTGCTCTCACGCGATCTCAGCGAAGCCCAGCGCTCCATCAAGGAGCTTGAGGTGCCGCACTTCCACCACGAACTGATTTACGAGG CAATCATAATGACGCTGGAGGCGTTCAACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACTGTACCTGCATCGTGACGCCG GAGCACGCACTGGAGCAAGGGTTCCGGCGCGTCTACGAGGACATGACCGAC ]
[+] EMBL BM591977 [ ccGCCCA CGCGTC CGAGGAGCTTGAGGTGCCGCACTTCCACCACGAACTGATTTACGAGG CAATCATAATGACGCTGGAGGCGTTCAACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACAGTACCTGCATCGTGACGCCG GAGCA G A TGGAGCAAGGGTTCCGGCGCGTCTACGAGGACATGACCGACATCGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCGCGCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCGTTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTAAAATGTGGGTGTGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCGCCCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAAATTAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACGGAGAGAGAGAGAGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCG TTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAG ]
[+] EMBL AL932396 [ aatncccCGAGGTTAAACATAATGACGCTGGAGGCG TC ACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACAGTACCTGCATCGTGACGCCG GAGCA G A TGGAGCAAGGGTTCCGGCGCGTCTACGAGGACATGACCGACATCGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCGCGCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCGTTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTAAAATGTGGGTGTGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCG CCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAAATTAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACG GAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCGTTTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAGAAAGTTACAACCGGTACACACAC CAATATAT TGGGGAAGCGCAGAGGATGAGCGCGGCT AATGANAGGAAGAAA TCATTCATACTCTTTTATAAAc ]
[+] EMBL CNS095HM [ CCGTGAGCA G A TGGAGCAAGGGTTCGTGCGCGTCTACGAGGACATGACCGACATCGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCG GCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCGTTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTAAAATGTGGGTGTGTTC TTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCG CCCCCACTCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAA TAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACG GAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCG TTTTTTTGAGCTAAATTTGTTGCGGATTTTCAGAAGGATCACGGAAATGAGGAAAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTC TTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTC TTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGG ACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCTTATTAAAC ]
[+] EMBL BM653642 [ ccGCGCGTCTACGAGGACATGACCGACATCGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCGCGCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCGTTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTAAAATGTGGGTGTGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCG CCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAA TAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACG GAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCG TTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAAAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTC TTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTCTTTTTCCTAACATCCCCCATCATGATATGCCCTCTT ]
[+] EMBL BM603796 [ CCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCG TTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAGAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTC TTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGGAGGAAAACATTAACTTC TTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGG ACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCTTATTAAAC AAAAAAAAAACACTAAACTTAACGAGTGAGTCGAAATTTGCGCGAAATCTGTGTGTGGGACGAGAGATTGTCCTTTTCGCTTCGTTTTTGGGTGGTTTTGTTTTCTTCCTTTTTTCTATTGCACTAATTAATTGTGAAAAGAATATTTTTGGGT ]
[-] EMBL CNS095HN [ AGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTC TTTATAAAACAAAACGAAAATCTATTACCTGTGTATCACAATATAAGCAGCAAGAAGAAGGAAAACATTAACTTC TTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGG ACATATGTATTATTGTTGCTG TCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCTTATTAAA AAAAAAGAAAAACACTAAACTTAAC CGTGAGTCGGAATTTGCGCGAAATCTGTGTGTGGGACGAGAGATTGTCCTTTTCGCTTCGTTTTTGGTTGTTTTTGTTTT TTCC TTTTTCTA TGCACTt ]
[+] EMBL BM630335 [ ccgATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTATTTACATATATACTAATATGCGTGTGTGTACAGCAGGGTACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCTTATTAAACAAAAAAAAAAAACACTAAACTTAAC CGTGAGTCGGAATTTGCGCGAAATCTGTGTGTGGGACGAGAGATTGTCCTTTTCGCTTCGTTTTTGGTTGTTTTTGTTTTCTTCCTTTTTTCTATTGCACTAATTAATTGTGAAAAGAATATTTTTGGTTTTATTTTTTTATATTTTTACTGTACTGAATATTCACATCGTGGGCGCGCAATTAATTTTTGTTTGCTGAGAGGAAGAGTCGCTAAGGTTACGGATTAACACAAAGCTTAAAAGGACGCAAATATTTGACGGCAAACACACTCGTACGGCAGAATGCATAAATGCATATAATACATAAATTACGCGAGGCGAAATGAACTGAACCCCCCCATCAATGATGAGTCCATCATCATTCCCCCT]
consensusID : consensus_9005#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence
[CCGCGGACGCGTGGGCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCGCCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAATAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACGGAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCGTTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAAAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTCTTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTCTTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGGACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCT]
[+] EMBL BM609269 [CCGCGGACGCGTGGGCTCGCGCGCTGCGCATCACCCAAACTTCTTGGCGGCGGCGCCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAATAAGATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACGGAGAGAGAGCGAGAGAGAGGGAAGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGTGTGTGAGATATAGGATGCGTTTTTTTGAGCTAAATTTGTTGCGGAAAAGCAGAAGGATCACGGAAATGAGGAAAAAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCTAAAAGAGAGGAAGAAATTCATTCATACTCTTTATAAAACAAAACAAAAATCTATTACCTGTGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTCTTTTCCTAACATCCCCCATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATATGCGTGTGTGTACAGCAGGGACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACACACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAATTCAATTAAAGCCT]
consensusID : consensus_9005#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 297 fasta sequence
[CCGTGGAGAACGGCGGCAAGCAGCTGCTGAACGGCGGCGCTGAGCTCCTCAGCAATGGCGCCGGCGGCTCGCCGGGCGGCGGCGAGGGTAGCAGCGGCCCCGGCTCCCCGGCCAGCGGTGGTGAAGTGGCGGGCGGGCAGGAAGGGACGGCCGCAGGCGGCGAGCTGATGAAGAAGCCGGCCGGCCCGCTCACCAAGCGCGTCCGCAAGCTGTCCCGCTCGAACAGCAAGGACGGCGTGCTGGGGGTGGCCGGCACGCCCAACTTCGTCGCACCGCACCGGAAGTGGAAGAACAGCC]
[+] EMBL BM612404 [CCGTGGAGAACGGCGGCAAGCAGCTGCTGAACGGCGGCGCTGAGCTCCTCAGCAATGGCGCCGGCGGCTCGCCGGGCGGCGGCGAGGGTAGCAGCGGCCCCGGCTCCCCGGCCAGCGGTGGTGAAGTGGCGGGCGGGCAGGAAGGGACGGCCGCAGGCGGCGAGCTGATGAAGAAGCCGGCCGGCCCGCTCACCAAGCGCGTCCGCAAGCTGTCCCGCTCGAACAGCAAGGACGGCGTGCTGGGGGTGGCCGGCACGCCCAACTTCGTCGCACCGCACCGGAAGTGGAAGAACAGCC]
consensusID : consensus_9005#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 212 fasta sequence
[ATCGTGGGCGCGCAATTAGTTTTTGTTTGCTGAGAGAGAGAGTCGCTAAGGTTACGAACTAACACAAAGCTTAAAAGGACGCAAATATTTGACGGCAAACACACTCGTACGGGGCATGCATGAATGCATAAATGCATATAATACATAAATTACGCGAGGCGAAATGAACTGAACACCCCCGGACGCGTGGGCGGACGCGTGGGCGGACGCGT]
[-] EMBL BM599094 [ATCGTGGGCGCGCAATTAGTTTTTGTTTGCTGAGAGAGAGAGTCGCTAAGGTTACGAACTAACACAAAGCTTAAAAGGACGCAAATATTTGACGGCAAACACACTCGTACGGGGCATGCATGAATGCATAAATGCATATAATACATAAATTACGCGAGGCGAAATGAACTGAACACCCCCGGACGCGTGGGCGGACGCGTGGGCGGACGCGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9005#0 CCGCCCACGCGTCCGCCCACGCGTCCGGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCA 60
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CCCAAACTTCTTGGCGGGCGGGCAGGAAGGGACGGCCGCCGGCGGCGAGCTGATGAAGAA 120
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GCCGGCCGGCCCGCTCACCAAGCGCGTCCGCAAGCTGTCCCGCTCGAACAGCAAGGACGG 180
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGTGCTGGGGGTGGCCGGCACGCCCAACTTCGTCGCACCGCACCGGAAGTGGAAGAACAG 240
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CCGCCGGTCGCGGAACGGGTACGGGCGCGGCCTGCCCAAGAAGGGGGGCGCGGGCGGCAA 300
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GGGCGTGTGGGGCAAGCCGGGTTCGGAGGAGGTGTACGACGAGCTGGACGAGGACCCGAA 360
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGATCCGAACTTCGACATCGACGCGTACAACAGCTCGCACAACGTGGAGCTGAAGGAGAT 420
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGTGCCGCAGCCGACCGAGGCCGAGGTGGCCAAAAAGCTCGAGACGATCATACTGGAGTA 480
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CTTCGAGCACGGGGATACGCGCGAGGTGGCGGACGCGCTGGACGAGCTGCTGCCGCCCGG 540
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CCTGAAGCCGCTGGTGACGAAAACGTTCGTGTCGGTTGCGCTCGAGCACAAGCAGTCGCA 600
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GCGCGAGCTGACCTCGGTGCTGATGTCGGACCTGTACGGGCGCATCGTGACGCGCGAGGA 660
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TATTTGCGCAGGGTTCGATCTGCTGCTGGCCAACCTGGCCGACATCATGCTGGACACGCC 720
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GGACGCGCCCCATCTGCTCGGCAACTTCATTGCGCGGGCCGTCGCGGACGACTGCATTCC 780
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GCCCAAGTACGCGTACCAGTCGGAGCGGGAGGACCTGGACCGGCACGGGCAGGCGGCGCT 840
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGTGCGCGCCACCACGCTGCTCTCGATGCACGACGGCTGGGGCCAGCTCGACAACGTCTG 900
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GGGGGTCGGTGGTGCCCTCCGGCCGGTGCAGACGATCACGCAGCAGATGTCCTATCTGCT 960
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GCAGGAGTACCTGCTCTCACGCGATCTCAGCGAAGCCCAGCGCTCCATCAAGGAGCTTGA 1020
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GGTGCCGCACTTCCACCACGAACTGATTTACGAGGCAATCATAATGACGCTGGAGGCGTT 1080
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CAACGAGTCCACCGAGGTGGCCATTTGCGAGCTGTTCCGCACGCTCGACAGTACCTGCAT 1140
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGTGACGCCGGAGCAGATGGAGCAAGGGTTCCGGCGCGTCTACGAGGACATGACCGACAT 1200
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGTGCTGGACATCCCGCTCGCCTACTCGATCCTGGACCGCTTCATCCAGCGCTGCCAGCG 1260
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CGCCGGCTCGTTCATGAGCGAGGCCCTCATCAAGGATATTCCCACCCGTGGCCGCAAGCG 1320
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TTTCGTCTCGGAGGGTGACGGTGGCCTGATCAAACAGGTCAATTTCCAGCGCGACTTTTA 1380
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 AAATGTGGGTGTGTTCCGCTCCAATCTCTCGCGCGCTGCGCATCACCCAAACTTCTTGGC 1440
consensus_9005#1 ------------CCGCGGACGCGTGGGCTCGCGCGCTGCGCATCACCCAAACTTCTTGGC 48
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ----------------------------CCGTGGAGAACGGCGGCAAGCAGCTGCTGAAC 32
consensus_9005#0 GGCGGCGCCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAAATTAAG 1500
consensus_9005#1 GGCGGCGCCCCCACCCCCACATATTGCAACCACCATTCATTGAGGAAAAAAAAA--TAAG 106
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 GGCGGCGCTGAGCTCCTCAGCAATGGCGCCGGCGGCTCGCCGGGCGGCGGCGAG------ 86
consensus_9005#0 ATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACGGAGAGAGAGC-GAGAGAGAGGGA 1559
consensus_9005#1 ATGTCAAGGAACGAGGAGTTGAAAGGAAAAGGATACGGAGAGAGAGC-GAGAGAGAGGGA 165
consensus_9005#3 -----------------ATCGTGGGCGCGCAATTAGTTTTTGTTTGCTGAGAGAGAGAGT 43
consensus_9005#2 -------GGTAGCAGCGGCCCCGGCTCCCCGGCCAGCGGTGGTGAAG-TGGCGGGCGGGC 138
* * * * * * *
consensus_9005#0 AGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGT-GTGTGAGATATAGGAT 1618
consensus_9005#1 AGAGAAGAATGGCCCCGGCGAATGAAAGCAAACGGGCGCGGGT-GTGTGAGATATAGGAT 224
consensus_9005#3 CGCTAAGGTTACGAACTAACACAAAGCTTAAAAGGACGCAAAT-ATTTG--ACGGCAAAC 100
consensus_9005#2 AGGAAGGGACGGCCGCAGGCGGCGAGCTGATGAAGAAGCCGGCCGGCCCGCTCACCAAGC 198
* * * * * * * **
consensus_9005#0 GCGTTTTTTTGA-GCTAAATTTGT-TGCGGAAAAGCAGAAGGATCACGGAAATGAGGAGA 1676
consensus_9005#1 GCGTTTTTTTGA-GCTAAATTTGT-TGCGGAAAAGCAGAAGGATCACGGAAATGAGGAAA 282
consensus_9005#3 ACACTCGTACGG-GGCATGCATGAATGCATAAATGCATAT--AATACATAAATTACGCGA 157
consensus_9005#2 GCGTCCGCAAGCTGTCCCGCTCGA--ACAGCAAGGACGGCGTGCTGGGGGTGGCCGGCAC 256
* * * * * ** * *
consensus_9005#0 AAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCT 1736
consensus_9005#1 AAGTTACAACCGCTACACACACACCAGATATATGGGGAAGCGCAGAGGATGAGCGCGGCT 342
consensus_9005#3 G-GCGAAATGAACTGAACACCC-CCGGACGCGTGGGCGGACGC-GTGGGCGGACGCGT-- 212
consensus_9005#2 G-CCCAACTTCGTCGCAC-CGCACCGGAAGTGGAAGAACAGCC----------------- 297
* ** * * ** ** * *
consensus_9005#0 AAAAGAGAGGAAGAAATTCATTCATACTCTTTATAAAACAAAACAAAAATCTATTACCTG 1796
consensus_9005#1 AAAAGAGAGGAAGAAATTCATTCATACTCTTTATAAAACAAAACAAAAATCTATTACCTG 402
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTCTTTTCCTAACATCCCC 1856
consensus_9005#1 TGTATCACGCTATAAGCAGCAAGAAGAAGGAAAACATTAACTTCTTTTCCTAACATCCCC 462
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATA 1916
consensus_9005#1 CATCATGATATGCCCTCTTCAATTCCTCCATTTATCTACCTACTTACATATATACTAATA 522
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TGCGTGTGTGTACAGCAGGGACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACA 1976
consensus_9005#1 TGCGTGTGTGTACAGCAGGGACATATGTATTATTGTTGCTGCTCCGCCCCGGACATAACA 582
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 CACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAAT 2036
consensus_9005#1 CACACTCACACTGTCTGTGGGAGCAGCAGGGGCAGCAGCACCACCAGAATCAGGGCGAAT 642
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TCAATTAAAGCCTTATTAAACAAAAAAAAAAAACACTAAACTTAACCGTGAGTCGGAATT 2096
consensus_9005#1 TCAATTAAAGCCT----------------------------------------------- 655
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TGCGCGAAATCTGTGTGTGGGACGAGAGATTGTCCTTTTCGCTTCGTTTTTGGTTGTTTT 2156
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TGTTTTCTTCCTTTTTTCTATTGCACTAATTAATTGTGAAAAGAATATTTTTGGGTTTAT 2216
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TTTTTTATATTTTTACTGTACTGAATATTCACATCGTGGGCGCGCAATTAATTTTTGTTT 2276
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GCTGAGAGGAAGAGTCGCTAAGGTTACGGATTAACACAAAGCTTAAAAGGACGCAAATAT 2336
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 TTGACGGCAAACACACTCGTACGGCAGAATGCATAAATGCATATAATACATAAATTACGC 2396
consensus_9005#1 ------------------------------------------------------------
consensus_9005#3 ------------------------------------------------------------
consensus_9005#2 ------------------------------------------------------------
consensus_9005#0 GAGGCGAAATGAACTGAACCCCCCCATCAATGATGAGTCCATCATCATTCCCCCT 2451
consensus_9005#1 -------------------------------------------------------
consensus_9005#3 -------------------------------------------------------
consensus_9005#2 -------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||