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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9009#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 967 fasta sequence
[CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGAAAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA-TTTTTAGTGTGC-TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGCACCATTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGATCGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCATCACCCTCGAGCAGGGTGAGAAGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGAGTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGCGCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC]
[+] EMBL BM589496 [CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGAAAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTATTTTTTAGTGTGCTTTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAA ]
[+] EMBL BX615664 [ AAAAGTGGAACCATCCTTCGCCCGTCGCTCGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTTCCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGCGGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCCGGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGAGGGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGCTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA TTTTTAGTGTGC TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGC ]
[+] EMBL BX618497 [ GCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATGCAAACAATAAAGTGCGTGGTCGTTGGTGACGGTGCGGTCGGTAAGACCTGCCTGTTCATTTCCTACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGCCGTCACGGTCATGATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGCTGGCCAGGAAGATTACGATCGACTACGACCACTGTCGTATCCACAGACCGATGTA TTTTTAGTGTGC TTTTCCGTCGTGAGTCCCAGTTCGTTCGAAAACGTTAAAGAAAAGTGGGTACCAGAAATAACGCACCATTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGATCGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCATCACCCTCGAGCAGGGTGAGAAGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGAGTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGCGCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC]
consensusID : consensus_9009#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence
[AGGCAGAATCCCCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTGCGGTGGCATAGTGCATATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGCTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC]
[+] EMBL AL931455 [AGGCAGAATCCCCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTGCGGTGGCATAGTGCATATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGCTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC]
consensusID : consensus_9009#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence
[TTTTCTTTTTGGAAATAGTTTATTCGAAATCGAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTTTAATTACTATTCGGTAGTAAACGAGCGTTCGCACTCGTGTGCTTTGTTCGATTTTGCTTGCGCTACTGGGCGCTAGTCAGGCATTACTGCTCAAAATAAATGAACCTTTTTGCCGGCGTTCACTGCAGCCTCGAAACCGTCACCGATCGCTTCGCCCGCCTTCCGGAAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGGCTTCGCCTCCTTCGGGCAGCCGGTCTGGTTGACGATGCTCAGATCGAACGGATCCACCGAGTACGAAGCCAATAGGGTGCGAATCTTGTGGACGTAGATTTTGTCCAAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGATGGCCGAACGGAATCTTCTGGCACGAAAACACCCCGGCGTACGTTTCGTAGTCCGTCATGAAGATGACAAACTTTGCGGAACCGGCTACGCTGAGTGGAAACCGTACGGTCATTCGGGCTGGTACGTCCCGGTCGGTGACGGTAAGCTTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGATCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA]
[+] EMBL CNS09I7K [TTTTCTTTTTGGAAATAGTTTATTCGAAATCGAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTTTAATTACTATTCGGTAGTAAACGAGCGTTCGCACTCGTGTGCTTTGTTCGATTTTGCTTGCGCTACTGGGCGCTAGTCAGGCATTACTGCTCAAAATAAATGAACCTTTTTGCCGGCGTTCACTGCAGCCTCGAAACCGTCACCGATCGCTTCGCCCGCCTTCCGGAAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGGCTTCGCCTCCTTCGGGCAGCCGGTCTGGTTGACGATGCTCAGATCGAACGGATCCACCGAGTACGAAGCCAATAGGGTGCGAATCTTGTGGACGTAGATTTTGTCCAAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGATGGCCGAACGGAATCTTCTGGCACGAAAACACCCCGGCGTACGTTTCGTAGTCCGTCATGAAGATGACAAACTTTGCGGAACCGGCTACGCTGAGTGGAAACCGTACGGTCATTCGGGCTGGTACGTCCCGGTCGGTGACGGTAAGCTTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGATCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA]
consensusID : consensus_9009#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 658 fasta sequence
[TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT-GAAGGACCC-GT-GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCTGCC]
[+] EMBL CNS08LR7 [TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGAGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAA TGGAACGCGCTCTGGCCCGCCGGGGCCTGGAAGGACCCGGTGGGCTACGA ]
[+] EMBL CNS08X9D [ GGCTCCGGTGGACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCC ]
[+] EMBL CNS08QFP [ GACATCGCAAAACTCTTCACATCTCTGAACAAACTTTGTCCGACTGATTGCTTTCCTGCCGATTCCGGATCTATCTGGAACAAACGATGGGCCACGGTCACGGACACGGACCGCCGTACAAGGTGCCGGATGCATCCATCTACAAAGTGGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAGATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAACAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCC]
[+] EMBL CNS08DPN [ GGCCGACGCGCCCGAGCTGGTCGAAGTGGAACGCGCTCTGGCCCGCCGGGGCCT GAAGGACCC GT GGCTACGAAATGAAGTGTGGCGCTACAATGTGAAGCAGTTTTCGACCCACCGTTCGCGGCTCATCACGTTCCTGTTCAAGGGATTCCCGCTCGGATTTGCTGCCTTCGTTGCGACGATCGGCGTCGAGTATGCGCTCGGAGTGGACTACCACGCACATGGTGGCCATGGTCATGGGGATGAGAAGGGACATGGAAGCGGTCATCACTAGTGCGAGAAATTTGACGAGTTAGACGGCCCCCATCTCCATCCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATTTTATTTCCAAAATTCTGCCGCAAAGAATAAACGAACTTATGGTGTAGCAGAAAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTTTCCGAGCggg ]
consensusID : consensus_9009#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence
[CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTCTGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTGGAACAGCTGACCAACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTGCGCTCGTTCGGCATCCGTCGTAACGAAAAGATTGCCGTCCACTGCACGGTGCGCGGTGCCAAGGCGGAGGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGTCGCGACAACTTCTCGCAGACCGGCAACTTCGGCTTCGGCATCCAGGAACACATCGATCTGGGCATCAAGTACGATCCGACGATCGGTATCTACGGTTTGGACTTCTACGTTGTGCTTGGCCGTCCAGGATACAACGTTGCCCAGCGACGACGCAAGATGGGCAAGATCGGCTTCATCCACCGTCTGACCAAGGAGGACGCGATGAAGTGGTTCCAGCAGAAGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTTATGCACGTTTATGTGTGTTGCGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGCGGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG]
[+] EMBL BM580670 [CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTCTGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTGGAACAGCTGACCAACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTGCGCTCGTTCGGCATCCGTCGTAACGAAAAGATTGCCGTCCACTGCACGGTGCGCGGTGCCAAGGCGGAGGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGTCGCGACAACTTCTCGCAGACCGGCAACTTCGGCTTCGGCATCCAGGAACACATCGATCTGGGCATCAAGTACGATCCGACGATCGGTATCTACGGTTTGGACTTCTACGTTGTGCTTGGCCGTCCAGGATACAACGTTGCCCAGCGACGACGCAAGATGGGCAAGATCGGCTTCATCCACCGTCTGACCAAGGAGGACGCGATGAAGTGGTTCCAGCAGAAGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTTATGCACGTTTATGTGTGTTGCGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGCGGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG]
consensusID : consensus_9009#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence
[CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTACTGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGGGATGCGTTTTTTCGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGAACAATCGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACATACTTTTTTTTATAAATTACCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAACACGATGCGGATGAGAGCCTCACGGTGTAACGAATCGTCTACAATCATTTACAAGTGTGTGAAGAAAAAGACTAAACAATACTCGCCCGCGCCCCTCCCAACGTGTACGCAGTTCCGTTATGTTATCAACTTTTCGTTGGGCGGTAGCACGGTAGAAAGCGCACGTGGACAGAACATCAGCCCGAACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCATGACTTCTTTGGAAGGTGGAGAAAAACCAACACGATTATCTTCTGTGTGCTGCAAGATTGAACAACTTCCTTGCAAAAAATAATAACAACTTCAAGCATGAAAACTTAACATCAAATAAAGAAGAAAACATCAATCGTATCAACTG]
[+] EMBL BM608711 [CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTACTGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGGGATGCGTTTTTTCGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGAACAATCGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACATACTTTTTTTTATAAATTACCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAACACGATGCGGATGAGAGCCTCACGGTGTAACGAATCGTCTACAATCATTTACAAGTGTGTGAAGAAAAAGACTAAACAATACTCGCCCGCGCCCCTCCCAACGTGTACGCAGTTCCGTTATGTTATCAACTTTTCGTTGGGCGGTAGCACGGTAGAAAGCGCACGTGGACAGAACATCAGCCCGAACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCATGACTTCTTTGGAAGGTGGAGAAAAACCAACACGATTATCTTCTGTGTGCTGCAAGATTGAACAACTTCCTTGCAAAAAATAATAACAACTTCAAGCATGAAAACTTAACATCAAATAAAGAAGAAAACATCAATCGTATCAACTG]
consensusID : consensus_9009#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence
[CCGGTCAACACCAAATAGACAACAAATTTGATTCATCGATTAATTCCCTGCCGGAGAAACTGTGCCGAGAAGTTCCCGAGAAGAAAACCAGCAACTCCCTTGGGAATGCAGAATCCCCAACTGGGGGTGCTATGGTTACAATCCTCCCTCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTAAATCGAAAAATGTTAAAAACGAACCAAAAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGAAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT]
[+] EMBL BM624465 [CCGGTCAACACCAAATAGACAACAAATTTGATTCATCGATTAATTCCCTGCCGGAGAAACTGTGCCGAGAAGTTCCCGAGAAGAAAACCAGCAACTCCCTTGGGAATGCAGAATCCCCAACTGGGGGTGCTATGGTTACAATCCTCCCTCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTAAATCGAAAAATGTTAAAAACGAACCAAAAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGAAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT]
consensusID : consensus_9009#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence
[GGCAGAATCCGACGAGGTTAGGAATCGGCCTNATCACGATCGCTCAGCGCTGCGGGTGCACCGAAGGCAGGTGGCCGCCGTGGCCGGTGGACTCCGTGGATTCGGAGTNGCTCGTTGCGCTTAAGGATCTGCTGAACCGGTTGGGCTCCGAGACGCTCTGCACGGAGCAAAAGTTCCCGACGGACGGGTCGGGCACGGATTTGCGCTCAAAGCTATCTGCTGAACTCGTCGATCGCTGCTTGCGAGGAGGCAGATCTCGTGCTGCTCGTCGGCACGAATCCGCGCTATGAGGCGCCGCTGCTGAAACACCCGCCTCAGGAAGGGATACATCCATAACGATCAAAACATTGCTCTGATTGGGCCGAAAGTTAACCTTTCGTTACGACCTATTAGCATCTTGGTAAGCGATACTCGCTGATCCCGGAATATCCCAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA]
[+] EMBL BX469047 [GGCAGAATCCGACGAGGTTAGGAATCGGCCTNATCACGATCGCTCAGCGCTGCGGGTGCACCGAAGGCAGGTGGCCGCCGTGGCCGGTGGACTCCGTGGATTCGGAGTNGCTCGTTGCGCTTAAGGATCTGCTGAACCGGTTGGGCTCCGAGACGCTCTGCACGGAGCAAAAGTTCCCGACGGACGGGTCGGGCACGGATTTGCGCTCAAAGCTATCTGCTGAACTCGTCGATCGCTGCTTGCGAGGAGGCAGATCTCGTGCTGCTCGTCGGCACGAATCCGCGCTATGAGGCGCCGCTGCTGAAACACCCGCCTCAGGAAGGGATACATCCATAACGATCAAAACATTGCTCTGATTGGGCCGAAAGTTAACCTTTCGTTACGACCTATTAGCATCTTGGTAAGCGATACTCGCTGATCCCGGAATATCCCAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9009#3 ------------------------------------------------------------
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 ------------------------------------------------------------
consensus_9009#6 ------------------------------------------------------------
consensus_9009#4 ------------------------------------------------------------
consensus_9009#0 CCGCCCACGCGTCCGCGCAACGCATTTATCTTCATTTCCCTGCCCAGTGGTCATTTAAGA 60
consensus_9009#5 ------------------------------------------------------------
consensus_9009#1 ------------------------------------------------------------
consensus_9009#3 ------------------------------------------------------------
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 ------------------------------------------------------------
consensus_9009#6 ------------------------------------------------------------
consensus_9009#4 ------------------------------------------------------------
consensus_9009#0 AAGTAAAACACGTTTTTTGGTTCCGTCTAGTAAAAGTGGAACCATCCTTCGCCCGTCGCT 120
consensus_9009#5 ------------------------------------------------------------
consensus_9009#1 ------------------------------------------------------------
consensus_9009#3 ------------------------------------------------------------
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 ------------------------------------------------------------
consensus_9009#6 ------------------------------------------------------------
consensus_9009#4 ------------------------------------------------------------
consensus_9009#0 CGAAGTGCGTATTGCGAGCGAAGTGCCCTTTATCCGCTGCTTCTTCCTCTGCTACCTCTT 180
consensus_9009#5 ------------------------------------------------------------
consensus_9009#1 ------------------------------------------------------------
consensus_9009#3 ------------------------------------------------------------
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 -----------------------------TTTTCTTTTTGGAAATAGTTTATTCGAAATC 31
consensus_9009#6 ------------------------------------------------------------
consensus_9009#4 ------------------------------------------------------------
consensus_9009#0 CCTGGCTGCAGCAGTCGTGCTGGTGTGCCGTTGTCATAAAGTGTGAGTTTGAAGGGAGGC 240
consensus_9009#5 ------------------------------------------------------------
consensus_9009#1 -------------------------------------------------AGGCAGAATCC 11
consensus_9009#3 --TTGTTTTGACAGCTGCCTGGTGAGGAAAATATTCCGTCGCGGCTCCGGTGGACATCGC 58
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 GAATAGACAGTCGGAAAAGTTGACAAAGAATGCACCAGTACGAAATAGAGTGAAAAGTTT 91
consensus_9009#6 -------------------------------------------------CCGGTCAACAC 11
consensus_9009#4 --------CCGCCCACGCGTCCGGAAGAACGTGATGCGCGATCTGCGTATCCGCAAGCTC 52
consensus_9009#0 GGGTCCACAGCAGCACCAGCAGCAGCAGCAACACAGCAAAATAACAAGAAGAATCAACCC 300
consensus_9009#5 --------------CCGCCCACGCGTCCGCCTGCATCGAGCATAGAAAAGGGCAGACTAC 46
consensus_9009#1 CCCGAGGTGTGTGTAAAAAGCATATTGCGTCGTTTTTAAAGGTTTCCCATCTACGACCCA 71
consensus_9009#3 AAAACTCTTCACATCTCTGAACAAAC-TTTGTCCGACTGATTGCTTTCCTGCCGATTCCG 117
consensus_9009#7 -------------------------------------------------------GGCAG 5
consensus_9009#2 TAATTACTATTCGGTAGTAAACGAGC-GTTCGCACTCGTGTGCTTTGTTCGATTTTGCTT 150
consensus_9009#6 CAAATAGACAACAAATTTGATTCATC-GATTAATTCCCTGCCGGAGAAACTGTGCCGAGA 70
consensus_9009#4 TGCCTGAACATTTGCGTCGGCGAGTCCGGTGATAGGCTGACACGTGCCGCCAAGGTGCTG 112
consensus_9009#0 GGGACGCGCGTCCGCAGCCACCATACAAAGCAAAGCGTAAGCACAAATCCCACAGGCAGA 360
consensus_9009#5 TGACTAAACAATAGCGTTATTTATAATGGTGTGAGCAGCGACGGTTGCGCGCTTTGGCGG 106
consensus_9009#1 CAAACAAACGAAAAACATAATTATGC-GTGCGGTGGCATAGTGCATATGTTTTGGGAAAA 130
consensus_9009#3 GATCTATCTGGAACAA--ACGATGGGCCA-CGGTCACGGACACGGACCGCC--GTACAAG 172
consensus_9009#7 AATCCGAC-GAGGTTA--GGAATCGGCC--TNATCACGATCGCTCAGCGCT--GCG-GGT 57
consensus_9009#2 GCGCTACTGGGCGCTA--GTCAGGCATTACTGCTCAAAATAAATGAACCTT--TTTGCCG 206
consensus_9009#6 AGTTCCCGAGAAGAAA--ACCAGCAACT--CCCTTGGGAATGCAGAATCCCCAACTGGGG 126
consensus_9009#4 GAACAGCT---GACCA--ACCAGACGCCCGTCTACTCGAAGGCCCGCTACACCGTG-CGC 166
consensus_9009#0 GGGTTGCAGCAGTAGC--AGCAGCAGCAG-CAGCAGCAGCAGCAGAATGCAAACAATAAA 417
consensus_9009#5 GATGCGTT----TTTT--CGCACCGCTTTCCGCGCTCGGGCAGCAGCAACCCGGTAGAGA 160
consensus_9009#1 GTTTCATCCAATGACAGCAGCAAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTACGAGAGA 190
*
consensus_9009#3 GTGC----CGGATGCATCCATCTACAA-AGTGGCCGACGCGCCC-GAGCT--GGTC---G 221
consensus_9009#7 GCAC----CGAAGGCAGGTGGCCGCC---GTGGCCGGTGGACTC-CGTGG--ATTC---G 104
consensus_9009#2 GCGT----TCACTGCAGCC-TCGAAAC-CGTCACCGATCGCTTC-GCCCG--CCTTCCGG 257
consensus_9009#6 GTGC----TATGGTTACAATCCTCCCT-CGAAGAACACGCACAT-GAGTA--ACGTGCAG 178
consensus_9009#4 TCGT----TCGGCATCCGTCGTAACGA-AAAGATTGCCGTCCACTGCACG--GTGCGCGG 219
consensus_9009#0 GTGCG---TGGTCGTTGGTGACGGTGC-GGTCGGTAAGACCTGCCTGCTC--ATTTCC-- 469
consensus_9009#5 ACAAT---CGAGGACACTAAACGAAAGGCGAAGAGGATATTTTGAGACAT--ACTTTTTT 215
consensus_9009#1 TTGAACATCAATTTTGTTTACCAACAAAATACGCAACCGAACGGTGGTCGTAGAGTTTGT 250
consensus_9009#3 AAGTGGAACGCGCTCTGGCCCGCCGGGGCCTG-AAGGACCCGT--GGCTACGAAATGAAG 278
consensus_9009#7 GAGTNGCTCG-----TTGCGCTTAAGGATCTG-CTGAACCGGTTGGGCTCCGAGACG--- 155
consensus_9009#2 AAAGCGTTTGCAATGTTGCGCGTGGAAAGGTGTCCGGGTCGATGTGAATATTCCATCCGG 317
consensus_9009#6 CAATTAATCG------ATCAATCGAAGAGCAACTTAAATCGAA--AAATGTTAAAAA--- 227
consensus_9009#4 TGCCAAGGCGGA--GGAGATCCTCGAGCGTGGCCTGAAGGTGCGCGAGTACGAGCTGCGT 277
consensus_9009#0 TACACGACCAACAAATTTCCATCCGAGTACGTACCGACCGTGTTCGACAACTACGC---- 525
consensus_9009#5 TTATAAATTA-----CCGTCAGCATTTAACTTTACGACTAGGCGCGACATTTCCAAA--- 267
consensus_9009#1 GTGTTGTCCATCTTTGTGGTAGTGAAAGTGTG-CTAGCAAAGTGTAGATGGCAGAAGCCA 309
consensus_9009#3 TGTGGCGCTACAATGTG-AAGCAGTTTTCGACCCACCGTTCGCGGCTCATC--ACGTTCC 335
consensus_9009#7 -----CTCTGCACGGAG-CAAAAGTTCCCGACGGACGGGTCG-GGCACG-----GATTTG 203
consensus_9009#2 CTTCGC-CTCCTTCGGG-CAGCCGGTCT-GGTTGACGATGCTCAGATCGA---ACGGATC 371
consensus_9009#6 -----CGAACCAAAAAA-AAAAAATATCATAACCAT-ACACAAGAACCAA---GCCCAAA 277
consensus_9009#4 -----CGCGACAACTTC-TCGCAGACCGGCAACTTCGGCTTCGGCATCCA----GGAACA 327
consensus_9009#0 -----CGTCACGGTCAT-GATCGGTGGCGAACCCTACACGCTCGGTTTGTTTGACACAGC 579
consensus_9009#5 --------CACGATGCG-GATGAGAGCC----TCACGGTGTAACGAATCGTCTACAATCA 314
consensus_9009#1 TTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAA 369
consensus_9009#3 TGTTCAA-GGGATTCCCGCTCGGATTTG-CTG--CCTTCGTTGCGACGATCGG---CGTC 388
consensus_9009#7 CGCTCAA-AGC-TATCTGCT-GAACTCG-TCGATCGCTGCTTGCGAGGAGGCA---GATC 256
consensus_9009#2 CACCGAG-TACGAAGCCAATAGGGTGCG-AA---TCTTGTGGACGTAGATTTT---GTCC 423
consensus_9009#6 AACCCAA-GCAAACACCAGAAGTGAACG-AA-------ATCGACGATAATCTA---GTGC 325
consensus_9009#4 CATCGATCTGGGCATCAAGTACGATCCG-ACGATCGGTATCTACGGTTTGGAC---TTCT 383
consensus_9009#0 TGGCCAG-GAAGATTACGATCGACTACG-ACCACTGTCGTATCCACAGACCGATGTATTT 637
consensus_9009#5 TTTACAAGTGTGTGAAGAAAAAGACTAA-ACAATACTCGCCCGCGCCCCTCCCAACGTGT 373
consensus_9009#1 GCTCTACAAGAATATCCAAAGACATTAGCGTGGAGGTTAATCGCACAAGGCCTGCTTGGC 429
* *
consensus_9009#3 GAGTA-TGCGC-TCGGA--GTGGACTACCACGCACATGGT-GGCCATGGTCATGG-GGAT 442
consensus_9009#7 TCGTGCTGCTCGTCGGC--ACGAATCCGCGC-TATGAGGC-GCCGCTGCTGAAAC-ACCC 311
consensus_9009#2 AAATCGCGCGTGCGGGACAGCAGGGTCGCACTCTGCCGAT-GGCCGAACGGAATC-TTCT 481
consensus_9009#6 AGCTCCGGTTCGTACGTGGACGCTTTTCCCC-GGTTTGGC-TATGGTGAAAACCG-GCCA 382
consensus_9009#4 ACGTTGTGCTTGGCCGTCCAGGATACAACGT-TGCCCAGC-GACGACGCAAGATG-GGCA 440
consensus_9009#0 TTAGTGTGCTTTTCCGTC-GTGAGTCCCAGTTCGTTCGAA-AACGTTAAAGAAAA-GTGG 694
consensus_9009#5 ACGCAGTTCCGTTATGTTATCAACTTTTCGT-TGGGCGGT-AGCACGGTAGAAAGCGCAC 431
consensus_9009#1 TTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCC 489
*
consensus_9009#3 GAGAAGGGAC-ATGGAAGCG-GTCATCACT-AGTGCGAGA--GAT--TTGACGAGTTAGA 495
consensus_9009#7 GCCTCAGGA--AGGGATACA-TCCATAACG-ATCAAAACATTGCT--CTGATTGGGCCGA 365
consensus_9009#2 GGCACGAAAACACCCCGGCG-TACGTTTCGTAGTCCGTCATGAAG--ATGACAAACTTTG 538
consensus_9009#6 CATCCGAACCGCTGGCGACA-GCAGCCTTAGAGTGTAAGACGTTT--TATGTTTCTGTTT 439
consensus_9009#4 AGATCGGCTTCATCCACCGT-CTGACCAAGGAGGACGCGATGAAG--TGGTTCCAGCAGA 497
consensus_9009#0 GTACCAGAAATAACGCACCA-TTGCCAGAAAACGCCGTTCCTGCTGGTGGGCACGCAGAT 753
consensus_9009#5 GTGGACAGAACATCAGCCCG-AACGTGTGTGCGCAAAGGAACGTACCAGAATTGGCATCA 490
consensus_9009#1 GCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTCGTTAACAAC--AAAACACACGACG 547
consensus_9009#3 CGGCCCCCATCTCCAT-----CCGGGTGGTGTTCTTTGTTGCTATCGTGCATTAGATT-- 548
consensus_9009#7 AAGTTAACCTTTCGTT-----ACGACCTATTAGCATCTTGGTAA----GCGATACTCG-- 414
consensus_9009#2 CGGAACCGGCTACGCT-----GAGTGGAAACCGTACGGTCATTCGGG-CTGGTACGTC-- 590
consensus_9009#6 TGTTTTTCGTGGTGAG-----ACAACAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAA 494
consensus_9009#4 AGTACGACGGTGTCATCCTGAACAGCAAGGCGAAGTAAGAGCCCGGATACGCTCTTCCTT 557
consensus_9009#0 CGATCTGCGCGACGAAAACAGCACACTGGAGAAGCTGGCTAAGAACAAACAAAAACCCAT 813
consensus_9009#5 TGACTTCTTTGGAAGGT---GGAGAAAAACCAACACGATTATCT----TCTGTGTGCTGC 543
consensus_9009#1 GCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGCATATTTA 607
consensus_9009#3 TTATTTCCAAAATTCTGCCG--CAAAGAATAAACGAACTTATGGTGTAGCAGAAACAAAA 606
consensus_9009#7 CTGATCCCGGAAT---ATCC--CAAATGGAACACCAATCCCGTTCGGCGAAGAAACTTGA 469
consensus_9009#2 CCGGT-CGGTGACGGTAAGC--TTGCCGGTGTACGAGTTCTCGTGCTTTAGGGGGTGCGA 647
consensus_9009#6 CGATTTAGGCAAATGAAAGC--TAGAAGCAACAAAGACGCGCGCAGAGGAAGAAA---AA 549
consensus_9009#4 ATGCACGTTTATGTGTGTTG--CGAGTGCTTCTAAAGTTTGGGTAAGACAGGTGTGCCGC 615
consensus_9009#0 CACCCTCGAGCAGGGTGAGA---AGCTGGCGAAGGAACTGAAGGCGGTGAAGTATGTCGA 870
consensus_9009#5 AAGATTGAACAACTTCCTTG--CAAAAAATAATAACAACTTCAAGCATGAAAACTTAACA 601
consensus_9009#1 CTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGA 667
consensus_9009#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCTGCC-------- 658
consensus_9009#7 ------------------------------------------------------------
consensus_9009#2 TCGAGACCGGTGCCTTTGGGGAGATCTGCTCGATAAA----------------------- 684
consensus_9009#6 AACAGACGAGAAGATTAAAACAAAACCACACGAGCAAT---------------------- 587
consensus_9009#4 GGAGGAGGCGGAGGAAGGACCGGAGCAGGTGGGCGCGTTG-------------------- 655
consensus_9009#0 GTGTTCGGCGTTGACCCAGAAAGGGCTGAAGAACGTGTTCGACGAGGCAATCCTGGCGGC 930
consensus_9009#5 TCAAATAAAGAAGAAAACATCAATCGTATCAACTG------------------------- 636
consensus_9009#1 GAAGTTCCCGTACGGTACGCTGGCAGAATCCGCTCANCCAATCCC--------------- 712
consensus_9009#3 -------------------------------------
consensus_9009#7 -------------------------------------
consensus_9009#2 -------------------------------------
consensus_9009#6 -------------------------------------
consensus_9009#4 -------------------------------------
consensus_9009#0 GCTGGAACCCCCAGAGCCGACGAAAAAGAGGAAGTGC 967
consensus_9009#5 -------------------------------------
consensus_9009#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||