cluster # 9029

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Anopheles gambiae
cluster # 9029 cluster # 9029 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9029#0 length = 1014 sequences # 9
consensus_9029#1 length = 743 sequences # 1

consensus_9029#2 length = 678 sequences # 1
consensus_9029#3 length = 598 sequences # 2

consensusID : consensus_9029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1014
fasta sequence

                              [ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCACAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT-CCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCAACGACCATAAGCTGGTGCCGATCCGCGGTCAGGTCATCAAGGTGCGGGCCTCCTGGGTGAAGACGGCGTTCTATGCGGACTTCGACACGTACGTCATACCGGGCTTTGAGGGCG]

[+] EMBL BX601927             [ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCACAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATTCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT CCTGCCCGTGTACCGTG                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX603541             [      TGCATCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCACAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGT TCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACAT                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX601817             [          TCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCACAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX605646             [                AGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCACAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX604557             [                                                                           CGCCGTTGCAGCATCCACCAACTAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCCTG CCGTGTACCGTGCCGCGACCGAGCAAGAGCTTACCATCTGTCC                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX616377             [                                                                                                                                                                        AGTTAGGTCGTTGCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT CCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGTTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCCACGACCATAAGCTGGTGCCGATTCGCGGTCAGGTCA                                                                              ]
[+] EMBL BX605378             [                                                                                                                                                                                                                                                                                                                          ACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT CCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCAACGACCATAAGCTGGTGCCGATCCGCGGTCAGGTCATCAAGGTGCGGGCCTCCTGGGTGAAGACGGCGTTCTATGCGGACTTCGACACGTACGTCATACCGGGCTTTGAGGGCG]
[+] EMBL BX605988             [                                                                                                                                                                                                                                                                                                                             TTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGA TTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT CCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCAACGACCATAAGCTGGT                                                                                                  ]
[+] EMBL BX625835             [                                                                                                                                                                                                                                                                                                                                                                                                                        TCACCATACTCTCGGACCGGTTCGAGCAGGACACGTGCAGTGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGT CCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACAATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCAACGACCATAAGCTGGTGCCGATCCGCGGTCAGGTCATCAAGGTGCGG                                                                   ]




>consensus_9029#0
ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCA
CAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTG
TTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTT
GCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTATAGCTTTCCGTC
AGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGT
GGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCG
GTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCT
CGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAA
CCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCC
ACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGG
GGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCC
TGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGT
ATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAG
AAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGC
TGCGCGGCAAGTACGACGTGGTCGTGAACTGTACCGGTCTGGGGGCGAAGCGGCTGTGCA
ACGACCATAAGCTGGTGCCGATCCGCGGTCAGGTCATCAAGGTGCGGGCCTCCTGGGTGA
AGACGGCGTTCTATGCGGACTTCGACACGTACGTCATACCGGGCTTTGAGGGCG

consensusID : consensus_9029#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 743
fasta sequence

                              [GCAGAATCGGCACGAGGGTCACACAGTTTCGCCATTGTCGCCGTTGCAGCATCCCCGAAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATTCAAAGGCTGATGCGTGAGTTTAGGTCGTTGCCATTAGTTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTTATAGCTTTCCGTCAGCTTTCAACCATTATCCTTTGGACGGACGGTGGATCACAATTCCAGTGGAACTTGGTGAACGGTGGAACGGCAAAAAAAACCNTTATCGACAATGGAATATATGCGTTCGTCGGGGCCGGGTGTTCGTCGGTTTGACGACCGCACCTGGAGCTTACAGCGCGAGGATGCGGAACGCCAATGTCACCATTAACTCTTCGGGACCGGTTCGAGCAGGACACCGTGCAGTGACGTTGCGGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGGACCGAGGAAATAACCAGGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTNTTTCCAGCCGAGATCCGGCCATTGTACGGAATCAGCTACAGTCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACAATCTGTCCGGGCGAATGGNAAGTATTGGGTCGTTTTTCAGCCACCATCCTTGCCGAGT]

[+] EMBL BX468665             [GCAGAATCGGCACGAGGGTCACACAGTTTCGCCATTGTCGCCGTTGCAGCATCCCCGAAACGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATTCAAAGGCTGATGCGTGAGTTTAGGTCGTTGCCATTAGTTGACGGAAGAGGAAAAATAGAGACCGATCCCTCAGGTGTTATAGCTTTCCGTCAGCTTTCAACCATTATCCTTTGGACGGACGGTGGATCACAATTCCAGTGGAACTTGGTGAACGGTGGAACGGCAAAAAAAACCNTTATCGACAATGGAATATATGCGTTCGTCGGGGCCGGGTGTTCGTCGGTTTGACGACCGCACCTGGAGCTTACAGCGCGAGGATGCGGAACGCCAATGTCACCATTAACTCTTCGGGACCGGTTCGAGCAGGACACCGTGCAGTGACGTTGCGGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGGACCGAGGAAATAACCAGGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTNTTTCCAGCCGAGATCCGGCCATTGTACGGAATCAGCTACAGTCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACAATCTGTCCGGGCGAATGGNAAGTATTGGGTCGTTTTTCAGCCACCATCCTTGCCGAGT]




>consensus_9029#1
GCAGAATCGGCACGAGGGTCACACAGTTTCGCCATTGTCGCCGTTGCAGCATCCCCGAAA
CGAATCGCGCTTGAACGCAGCGTGTTGCGTATCGCGTAAAGTTACACAATTCAAAGGCTG
ATGCGTGAGTTTAGGTCGTTGCCATTAGTTGACGGAAGAGGAAAAATAGAGACCGATCCC
TCAGGTGTTATAGCTTTCCGTCAGCTTTCAACCATTATCCTTTGGACGGACGGTGGATCA
CAATTCCAGTGGAACTTGGTGAACGGTGGAACGGCAAAAAAAACCNTTATCGACAATGGA
ATATATGCGTTCGTCGGGGCCGGGTGTTCGTCGGTTTGACGACCGCACCTGGAGCTTACA
GCGCGAGGATGCGGAACGCCAATGTCACCATTAACTCTTCGGGACCGGTTCGAGCAGGAC
ACCGTGCAGTGACGTTGCGGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGG
ACCGAGGAAATAACCAGGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCG
CCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTNTTTCCA
GCCGAGATCCGGCCATTGTACGGAATCAGCTACAGTCGAGAAGGTCCTGCCCGTGTACCG
TGCCGCGACCGAGCAGGAGCTTACAATCTGTCCGGGCGAATGGNAAGTATTGGGTCGTTT
TTCAGCCACCATCCTTGCCGAGT

consensusID : consensus_9029#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CCGCCCACGCGTCCGCCTTCAGCTTCATCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCACAAAAAAACCTTATCGACAATGAATATATGCGTCGTCGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGACCGGTTCGAGCAGGACACGTGCAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTCTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGA]

[+] EMBL BM590598             [CCGCCCACGCGTCCGCCTTCAGCTTCATCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCACAAAAAAACCTTATCGACAATGAATATATGCGTCGTCGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGACCGGTTCGAGCAGGACACGTGCAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTCTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGA]




>consensus_9029#2
CCGCCCACGCGTCCGCCTTCAGCTTCATCTGTACAGGTGTATAGCTTTCCGTCAGCTTCA
ACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCACA
AAAAAACCTTATCGACAATGAATATATGCGTCGTCGGGGCCGGTGTCGTCGGTTTGACGA
CCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGACCGGT
TCGAGCAGGACACGTGCAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTT
CCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACG
AACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTT
TTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGT
ACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGT
TCTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTC
TTGACAATGGCGGACGGATTGTTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCA
AGTACGACGTGGTCGTGA

consensusID : consensus_9029#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 598
fasta sequence

                              [ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTC]

[+] EMBL BX606431             [ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTTTTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTC]
[+] EMBL BX604216             [ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCATATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAAAAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACCGCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTCGAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTTCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGCTT                                                                                              ]




>consensus_9029#3
ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTGTATAGCTTTCCGTCAGCTTCAACCA
TATCCTTGGACGGACGGTGGATCACAATCCAGTGGACTTGGTGAACGGTGGGCGCAAAAA
AAAACCTTATCGACAATGAATATATGCGTCGTTGGGGCCGGTGTCGTCGGTTTGACGACC
GCACTGGAGCTACAGCGCGAGATGCGGAACGCCAATGTCACCATACTCTCGGATCGGTTC
GAGCAGGACACGTGTAGCGACGTTGCGGCTGGCCTATTTCGCCCCGGAACCAGCTTTTCC
GGCCCGACCGAGGAAATAACCAGGAAATGGATTTCAGACGCGTACAGCCACTGGGACGAA
CTGCGCCGGACGGAACATTCAGCCCGGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTT
TCCAGCCGAGATCCGGCCATTGTACGGAATCACTACATCGAGAAGGTCCTGCCCGTGTAC
CGTGCCGCGACCGAGCAGGAGCTTACCATCTGTCCGGGCGAATGGAAGTATGGGTCGTTT
TTCACCACCATCCTTGCCGAGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9029#2      ------------------------------------------------------------
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTACGTTGGAAAGGTGGCAGGCCAACCA 60
consensus_9029#1      ---------------------------------------GCAGAATCGGCACGAGGGTCA 21
                                                                                  

consensus_9029#2      ------------------------------------------------------------
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      CAGTTTCGCCATTGTCGCCGTTGCAGCATCCACCAACGAATCGCGCTTGAACGCAGCGTG 120
consensus_9029#1      CACAGTTTCGCCATTGTCGCCGTTGCAGCATCCCCGAAACGAATCGCGCTTGAACGCAGC 81
                                                                                  

consensus_9029#2      ------------------------------------------------------------
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      TTGCGTATCGCGTAAAGTTACACAATCAAAGGCTGAAGCTGCTGCGTGAGTTAGGTCGTT 180
consensus_9029#1      GTGTTGCGTATCGCGTAAAGTTACACAATTCAAAGGCTGATGCGTGAGTTTAGGTCGTTG 141
                                                                                  

consensus_9029#2      --------CCGCCCACGCGTCCGCCTTCAGCTTCATCTGTACAGGTGT-ATAGCTTTCCG 51
consensus_9029#3      ------------ACCGGCTGCATCCTTTAGCTTCGTCTGTACAGGTGT-ATAGCTTTCCG 47
consensus_9029#0      GCCATTAGTGACGGAAGAGGAAAAATAGAGACCGATCCCT-CAGGTGT-ATAGCTTTCCG 238
consensus_9029#1      CCATTAGTTGACGGAAGAGGAAAAATAGAGACCGATCCCT-CAGGTGTTATAGCTTTCCG 200
                                      *        *  **     **  * ******* ***********

consensus_9029#2      TCAGCTT-CAACCAT-ATCCTT-GGACGGACGGTGGATCACAAT-CCAGTGGA-CTTGGT 106
consensus_9029#3      TCAGCTT-CAACCAT-ATCCTT-GGACGGACGGTGGATCACAAT-CCAGTGGA-CTTGGT 102
consensus_9029#0      TCAGCTT-CAACCAT-ATCCTT-GGACGGACGGTGGATCACAAT-CCAGTGGA-CTTGGT 293
consensus_9029#1      TCAGCTTTCAACCATTATCCTTTGGACGGACGGTGGATCACAATTCCAGTGGAACTTGGT 260
                      ******* ******* ****** ********************* ******** ******

consensus_9029#2      GAACGGTGGGC--ACAAAAAAA--CCTTATCGACAATG-AATATATGCGT-CGTCGGGGC 160
consensus_9029#3      GAACGGTGGGC--GCAAAAAAAAACCTTATCGACAATG-AATATATGCGT-CGTTGGGGC 158
consensus_9029#0      GAACGGTGGGC--GCAAAAAAAAACCTTATCGACAATG-AATATATGCGT-CGTTGGGGC 349
consensus_9029#1      GAACGGTGGAACGGCAAAAAAAACCNTTATCGACAATGGAATATATGCGTTCGTCGGGGC 320
                      *********     ********  * ************ *********** *** *****

consensus_9029#2      CGG-TGT-CGTCGGTTTGACGACCGCAC-TGGAGCT-ACAGCGCGAG-ATGCGGAACGCC 215
consensus_9029#3      CGG-TGT-CGTCGGTTTGACGACCGCAC-TGGAGCT-ACAGCGCGAG-ATGCGGAACGCC 213
consensus_9029#0      CGG-TGT-CGTCGGTTTGACGACCGCAC-TGGAGCT-ACAGCGCGAG-ATGCGGAACGCC 404
consensus_9029#1      CGGGTGTTCGTCGGTTTGACGACCGCACCTGGAGCTTACAGCGCGAGGATGCGGAACGCC 380
                      *** *** ******************** ******* ********** ************

consensus_9029#2      AATGTCACCAT--ACTCTC--GGACCGGTTCGAGCAGGACAC-GTGCAGCGACGTTGCGG 270
consensus_9029#3      AATGTCACCAT--ACTCTC--GGATCGGTTCGAGCAGGACAC-GTGTAGCGACGTTGCGG 268
consensus_9029#0      AATGTCACCAT--ACTCTC--GGATCGGTTCGAGCAGGACAC-GTGTAGCGACGTTGCGG 459
consensus_9029#1      AATGTCACCATTAACTCTTCGGGACCGGTTCGAGCAGGACACCGTGCAGTGACGTTGCGG 440
                      ***********  *****   *** ***************** *** ** **********

consensus_9029#2      -CTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCG-ACCGAGGAAATAACCAGG-A 327
consensus_9029#3      -CTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCG-ACCGAGGAAATAACCAGG-A 325
consensus_9029#0      -CTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCG-ACCGAGGAAATAACCAGG-A 516
consensus_9029#1      GCTGGCCTATTTCGCCCCGGAACCAGCTTTTCCGGCCCGGACCGAGGAAATAACCAGGGA 500
                       ************************************** ****************** *

consensus_9029#2      AATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCC 387
consensus_9029#3      AATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCC 385
consensus_9029#0      AATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCC 576
consensus_9029#1      AATGGATTTCAGACGCGTACAGCCACTGGGACGAACTGCGCCGGACGGAACATTCAGCCC 560
                      ************************************************************

consensus_9029#2      GGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTT-CCAGCCGAGATCCGGCCATTGTA 446
consensus_9029#3      GGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTT-CCAGCCGAGATCCGGCCATTGTA 444
consensus_9029#0      GGGCCGGTGTGTGCCAGATGTCGGGGTACATTTTTT-CCAGCCGAGATCCGGCCATTGTA 635
consensus_9029#1      GGGCCGGTGTGTGCCAGATGTCGGGGTACATTTNTTTCCAGCCGAGATCCGGCCATTGTA 620
                      ********************************* ** ***********************

consensus_9029#2      CGGAATCA-CTACA-TCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGC 504
consensus_9029#3      CGGAATCA-CTACA-TCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGC 502
consensus_9029#0      CGGAATCA-CTACA-TCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGC 693
consensus_9029#1      CGGAATCAGCTACAGTCGAGAAGGTCCTGCCCGTGTACCGTGCCGCGACCGAGCAGGAGC 680
                      ******** ***** *********************************************

consensus_9029#2      TTACCATCTGTCCGGGCGAATGGAA-GTAT-GGGTCGTTCTTCA-CCACCATCCTTGCCG 561
consensus_9029#3      TTACCATCTGTCCGGGCGAATGGAA-GTAT-GGGTCGTTTTTCA-CCACCATCCTTGCCG 559
consensus_9029#0      TTACCATCTGTCCGGGCGAATGGAA-GTAT-GGGTCGTTTTTCA-CCACCATCCTTGCCG 750
consensus_9029#1      TTACAATCTGTCCGGGCGAATGGNAAGTATTGGGTCGTTTTTCAGCCACCATCCTTGCCG 740
                      **** ****************** * **** ******** **** ***************

consensus_9029#2      AGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTG 621
consensus_9029#3      AGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTC--------------------- 598
consensus_9029#0      AGTGTCGGCTGTTTCAGCCGTGGGCCACAGAAAGGTTTCTTGACAATGGCGGACGGATTG 810
consensus_9029#1      AGT--------------------------------------------------------- 743
                      ***                                                         

consensus_9029#2      TTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGA--- 678
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      TTACCGTGGCGCTGAACAACTTGCAGGAGCTGCGCGGCAAGTACGACGTGGTCGTGAACT 870
consensus_9029#1      ------------------------------------------------------------
                                                                                  

consensus_9029#2      ------------------------------------------------------------
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      GTACCGGTCTGGGGGCGAAGCGGCTGTGCAACGACCATAAGCTGGTGCCGATCCGCGGTC 930
consensus_9029#1      ------------------------------------------------------------
                                                                                  

consensus_9029#2      ------------------------------------------------------------
consensus_9029#3      ------------------------------------------------------------
consensus_9029#0      AGGTCATCAAGGTGCGGGCCTCCTGGGTGAAGACGGCGTTCTATGCGGACTTCGACACGT 990
consensus_9029#1      ------------------------------------------------------------
                                                                                  

consensus_9029#2      ------------------------
consensus_9029#3      ------------------------
consensus_9029#0      ACGTCATACCGGGCTTTGAGGGCG 1014
consensus_9029#1      ------------------------