cluster # 9032

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Anopheles gambiae
cluster # 9032 cluster # 9032 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9032#0 length = 781 sequences # 6
consensus_9032#1 length = 770 sequences # 1

consensus_9032#2 length = 699 sequences # 5
consensus_9032#3 length = 481 sequences # 1

consensusID : consensus_9032#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 781
fasta sequence

                              [GGCAGATCGGCACGAGGCACGACGGAG-CATGGCGACNAACCCCATCATCAAGCTGTACACGGCGAAACTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTGCTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTACTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCC-GCTATCCGGCGCTGGTGG-CGTGGATTGAACGGCTCAGTCGTACCTTGCCT-GAGTACGACCAGCTCAACCAGG--AA---GGGGC-GGT-A-G-AGTTT--GCA--G-A-AATCTGTGAA-TC-GC-TGAG-GCTT---AAAAAT--GGGG-CGTCGGGTCCGCTTGCGAAAGTAAAAGCCACGATTTCCCAAGGGGTTTTGGACCACTTTCACCGGGGANATTTCCTGGTC]

[+] EMBL BX467607             [GGCAGATCGGCACGAGGCACGACGGAG CATGGCGACNAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAGAAATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATCTGGTGCAGAAGTACGGGAAGGATGGTCAGACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTGCTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCCGGCTATCCGGCGCTGGTGGACGTGGATTGAACGG TCATTCGTACCCTGCCTGGAGTACGACCAGTTCAACCAGGGAAAGGGGGGGCGGGTCACGAAGTTTTGGCAACGCACAATCTGTGAATTCGGCTTGAGACCTTCACAACAATTGGGGGCCGTCGGGTCCGCTTGCGAAAGTAAAAGCCACGATTTCCCAAGGGGTTTTGGACCACTTTCACCGGGGANATTTCCTGGTC]
[+] EMBL CNS09DRJ             [                      CGGAGCCATGGCAACGAACCCCATCATCAAGCTGTACACGGCGAAACTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTGCTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AY070255             [                                      AACCCCATCATCAAGCTGTACACGGCGAAACTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTGCTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTACTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCC GCTATCCGGCGCTGGTGG CGTGGATTGAACGGCTCAGTCGTACCTTGCCT GAGTACGACCAGCTCAACCAGG  AA   GGGGC GGT A G AGTTT  GCA  G A AATCTGTGAA TC GC TGAG GCTT   AAAAAT  GGGG CGTCGGtcgc                                                                      ]
[+] EMBL BX627973             [                                                                    CTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTGCTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTACTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCC GCTATCCGGCGCTGGTGG CGTGGATTGAACGGCTCAGTCGTACCTTGCCT GAGTACGACCAGCTCAACCAGG  AA   GGGGC GGT A G AGTTT  GCA  G A AATCTGT                                                                                                                   ]
[+] EMBL BX615720             [                                                                                                                   CCTGTCCCTTGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTACTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCC GCTATCCGGCGCTGGTGG CGTGGATTGAACGGCTCAGTCGTACCTTGCCT GAGTACGACCAGCTCAACCAGG  AA   GGGGC GGT A G AGTTT  GCA  G A AATCTGTGAA TC GC TGAG GCTT   AAAAAT  GGGG CGTC GGT CGC TGCG AAGT AAAGCCAC                                                 ]
[+] EMBL BX613042             [                                                                                                                                                                                                                                                                                                                                              TGGCCTGCACTTCGATTCGGGCGTACTTTTCGCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACT                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_9032#0
GGCAGATCGGCACGAGGCACGACGGAGCATGGCGACNAACCCCATCATCAAGCTGTACAC
GGCGAAACTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTGCTCGGCCTGTC
CCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCG
CCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAG
TCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCC
GGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTACT
GTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCC
GCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGA
GGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGC
GACGATGGAGGAGTTCTTCCCGATGGATCGCTCCCGCTATCCGGCGCTGGTGGCGTGGAT
TGAACGGCTCAGTCGTACCTTGCCTGAGTACGACCAGCTCAACCAGGAAGGGGCGGTAGA
GTTTGCAGAAATCTGTGAATCGCTGAGGCTTAAAAATGGGGCGTCGGGTCCGCTTGCGAA
AGTAAAAGCCACGATTTCCCAAGGGGTTTTGGACCACTTTCACCGGGGANATTTCCTGGT
C

consensusID : consensus_9032#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 770
fasta sequence

                              [GCAGAATCGGCACGATGGCACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAGAAATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATCTGGTGCAGAAGTACGGGAAGGATGGTCAGACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTGCTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATTGGAGGGAGTTCTTTCCCGATGGATCGCGTCCCCGCTATCCGGGCGCTAGGTGGCGTTGGATTGAAACGGGTTCATTTCGTACCCCTTNGCCTGAGTTAACGACCAGGCTCCACCAGGGAAGGGGGCGGTAGAGTTTGCAGAAAATCTTGNTGAATTCGTGAGANTTAAAATGGGGCGTCGGTCGNTTGAAATTAAAGCCCGAATTCAAGGGTTTNGCCCAG]

[+] EMBL BX467933             [GCAGAATCGGCACGATGGCACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAGAAATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATCTGGTGCAGAAGTACGGGAAGGATGGTCAGACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTGCTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGATTGGAGGGAGTTCTTTCCCGATGGATCGCGTCCCCGCTATCCGGGCGCTAGGTGGCGTTGGATTGAAACGGGTTCATTTCGTACCCCTTNGCCTGAGTTAACGACCAGGCTCCACCAGGGAAGGGGGCGGTAGAGTTTGCAGAAAATCTTGNTGAATTCGTGAGANTTAAAATGGGGCGTCGGTCGNTTGAAATTAAAGCCCGAATTCAAGGGTTTNGCCCAG]




>consensus_9032#1
GCAGAATCGGCACGATGGCACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTAC
ACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTG
AAGCTAGAAATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTG
CGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGAC
AGTCACGCCATCATCATCTATCTGGTGCAGAAGTACGGGAAGGATGGTCAGACCCTCTAT
CCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGCACTTCGATTCGGGCGTG
CTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTG
CCGCAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTG
GAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATT
GCGACGATTGGAGGGAGTTCTTTCCCGATGGATCGCGTCCCCGCTATCCGGGCGCTAGGT
GGCGTTGGATTGAAACGGGTTCATTTCGTACCCCTTNGCCTGAGTTAACGACCAGGCTCC
ACCAGGGAAGGGGGCGGTAGAGTTTGCAGAAAATCTTGNTGAATTCGTGAGANTTAAAAT
GGGGCGTCGGTCGNTTGAAATTAAAGCCCGAATTCAAGGGTTTNGCCCAG

consensusID : consensus_9032#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 699
fasta sequence

                              [CCGCCCACGCGTCCGCCGCCGC-TCCGCACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTACTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGAGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTACACGCAGGCCTGCACTTCGATTCGGGCGTGCTATTCTCTCGGTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGCCAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGAC-GATGGAGGAGTTCTTCCCGATGGATCGCTCCCGCTATCCGGCGCTGGT-GGCGTGGATT-GAACGGCTCAGTCGTACCCTGCCTGAGTACGACCAGCTCAACC-AGGAAGGGGCGGTAGAGTTTGCAGAAATCTGTGAATCGTTGAGGC]

[+] EMBL BM592153             [CCGCCCACGCGTCCGCCCACGCGTCCGCACGACGGAGCCATGGCAACGAACCCCATCATCAAGCTGTACACGGCGAAACTAAGCCCAGCGGGTCGTGCCGTACAACTGACTGCCAAGCTGCTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATCATCATCTATTTGGTGCACAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGGCTGCACTTCGATTCGGGCGTACTGTTCTCTCGGCTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGAC GATGGAG                                                                                                                                              ]
[+] EMBL BM606320             [               CCGCCGC TCAACACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTACTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGAGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTACACGCAGGCCTGCACTTCGATTCGGGCGTGCTATTCTCTCGGTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGCCAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGAC GATGGAGGAGTTCTTCCCGATGGATCGCTCCCGCTATCCGGCGCTGGT GGCGTGGATT GAACGGCTCAGTCGTACCCTGCCTGAGTACGACCAGCTCAACC AGGAAGGGGCGGTAGAGTTTGCAGAAATCTGTGAATCGTTGAGGC]
[+] EMBL BM582913             [               CCGCCGC TCAACACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTACTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGAGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTACACGCAGGCCTGCACTTCGATTCGGGCGTGCTATTCTCTCGGTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGCAGGCCAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCGCAACGATTGCGACGGATGGAGGAGTTCTTCCCGATGGATCGCTCCCGCTATCCGGCGCTGGTGGGCGTGGATTGGAACGGCTCAGTCGTACCCTGCCTGAGTACGACCAGCTCCACCAAGGAAGGG                                     ]
[+] EMBL BM609193             [                        CCGCACGACGGAGCCATGGCGACGAACCCCATCATCAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTACTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGAGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAACCCTCTAT                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM593359             [                                                                                                           GACTGCCAAGCTACTCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGAGACAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_9032#2
CCGCCCACGCGTCCGCCGCCGCTCCGCACGACGGAGCCATGGCGACGAACCCCATCATCA
AGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTAC
TCGGCCTGTCCCTAGACATCGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACG
AGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCG
TGCGAGACAGTCACGCCATCATCATCTATTTGGTGCAGAAGTACGGAAAGGATGGTCAAA
CCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTACACGCAGGCCTGCACTTCGATT
CGGGCGTGCTATTCTCTCGGTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGG
CGGAAGTGCCGCAGGCCAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACG
CCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTTAGCTGCATCG
CAACGATTGCGACGATGGAGGAGTTCTTCCCGATGGATCGCTCCCGCTATCCGGCGCTGG
TGGCGTGGATTGAACGGCTCAGTCGTACCCTGCCTGAGTACGACCAGCTCAACCAGGAAG
GGGCGGTAGAGTTTGCAGAAATCTGTGAATCGTTGAGGC

consensusID : consensus_9032#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence

                              [CCGAGGTTATCACACGACGGAGCCATGGCGACGAACCCATCATTAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAGAAATCTGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATACATCATCTATCTGGTGCAGAAGTACGGGAAGGCATGGTCAGAACCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGACACTTACGATNTCGGGCGTGCTGTTCTCAACGAGCTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTG]

[+] EMBL AL695535             [CCGAGGTTATCACACGACGGAGCCATGGCGACGAACCCATCATTAAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAGAAATCTGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCACGCCATACATCATCTATCTGGTGCAGAAGTACGGGAAGGCATGGTCAGAACCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGACACTTACGATNTCGGGCGTGCTGTTCTCAACGAGCTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAGTGCCGAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGTG]




>consensus_9032#3
CCGAGGTTATCACACGACGGAGCCATGGCGACGAACCCATCATTAAGCTCTACACGGCGA
AACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTGCTCGGCCTGAAGCTAG
AAATCTGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGACGAGTTTCTGCGCCTT
AACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGATCGTGCGGGACAGTCAC
GCCATACATCATCTATCTGGTGCAGAAGTACGGGAAGGCATGGTCAGAACCTCTATCCGG
AAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGACACTTACGATNTCGGGCGTGC
TGTTCTCAACGAGCTTGCGGTTCTATTTCGAACCGATACTGTACGAAGGATCGGCGGAAG
TGCCGAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTGCTGAACGACGCCCTGGT
G

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9032#1      ---------GCAGAATCGGCACGATGGCACGACGGAGCCATGGCGACGAACCCCATCATC 51
consensus_9032#3      ---------------CCGAGGTTATCACACGACGGAGCCATGGCGACGAACCC-ATCATT 44
consensus_9032#0      ---------GGCAGATCGGCACGA-GGCACGACGGAGC-ATGGCGACNAACCCCATCATC 49
consensus_9032#2      CCGCCCACGCGTCCGCCGCCGCTC-CGCACGACGGAGCCATGGCGACGAACCCCATCATC 59
                                      **         *********** ******** ***** ***** 

consensus_9032#1      AAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTG 111
consensus_9032#3      AAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGGCTGCCAAGCTG 104
consensus_9032#0      AAGCTGTACACGGCGAAACTAAGCCCACCGGGTCGTGCCGTAGAACTGACTGCCAAGCTG 109
consensus_9032#2      AAGCTCTACACGGCGAAACTAAGCCCGCCGGGTCGTGCCGTAGAACTGACTGCCAAGCTA 119
                      ***** ******************** ********************* ********** 

consensus_9032#1      CTCGGCCTGAAGCTAGAAATC-GTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGA 170
consensus_9032#3      CTCGGCCTGAAGCTAGAAATCTGTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGA 164
consensus_9032#0      CTCGGCCTGTCCCTAGACATC-GTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGA 168
consensus_9032#2      CTCGGCCTGTCCCTAGACATC-GTCCCAATCAATCTGCTCGCCGGTGATCATCGGACGGA 178
                      *********   ***** *** **************************************

consensus_9032#1      CGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGAT 230
consensus_9032#3      CGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGAT 224
consensus_9032#0      CGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGAT 228
consensus_9032#2      CGAGTTTCTGCGCCTTAACCCGCAGCACACAATCCCGGTGATTGACGATGGTGGTGTGAT 238
                      ************************************************************

consensus_9032#1      CGTGCGGGACAGTCACGCCAT-CATCATCTATCTGGTGCAGAAGTACGGGAAGG-ATGGT 288
consensus_9032#3      CGTGCGGGACAGTCACGCCATACATCATCTATCTGGTGCAGAAGTACGGGAAGGCATGGT 284
consensus_9032#0      CGTGCGGGACAGTCACGCCAT-CATCATCTATTTGGTGCAGAAGTACGGAAAGG-ATGGT 286
consensus_9032#2      CGTGCGAGACAGTCACGCCAT-CATCATCTATTTGGTGCAGAAGTACGGAAAGG-ATGGT 296
                      ****** ************** ********** **************** **** *****

consensus_9032#1      CAGACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTG-CACTT 347
consensus_9032#3      CAGAACCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTGACACTT 344
consensus_9032#0      CAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTAAACGCTGGCCTG-CACTT 345
consensus_9032#2      CAAACCCTCTATCCGGAAGATCCAATCGCTCGGGCGAAGGTACACGCAGGCCTG-CACTT 355
                      ** * ************************************* **** ****** *****

consensus_9032#1      -CGATT-CGGGCGTGCTGTTCTCTCGG---CTGCGGTTCTATTTCGAACCGATACTGTAC 402
consensus_9032#3      ACGATNTCGGGCGTGCTGTTCTCAACGAGCTTGCGGTTCTATTTCGAACCGATACTGTAC 404
consensus_9032#0      -CGATT-CGGGCGTACTGTTCTCTCGG---CTGCGGTTCTATTTCGAACCGATACTGTAC 400
consensus_9032#2      -CGATT-CGGGCGTGCTATTCTCTCGG---TTGCGGTTCTATTTCGAACCGATACTGTAC 410
                       ****  ******* ** *****   *    *****************************

consensus_9032#1      GAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTG 462
consensus_9032#3      GAAGGATCGGCGGAAGTGCCG-AGGACAAAATCGACTACATGAAGAAAGGGTACGAGCTG 463
consensus_9032#0      GAAGGATCGGCGGAAGTGCCGCAGGACAAAATCGACTATATGAAGAAAGGGTACGAGCTG 460
consensus_9032#2      GAAGGATCGGCGGAAGTGCCGCAGGCCAAAATCGACTACATGAAGAAAGGGTACGAGCTG 470
                      ********************* *** ************ *********************

consensus_9032#1      CTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTT 522
consensus_9032#3      CTGAACGACGCCCTGGTG------------------------------------------ 481
consensus_9032#0      CTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTT 520
consensus_9032#2      CTGAACGACGCCCTGGTGGAGGATTACATTGCGGGAAGCTCACTTACGCTGGCCGATGTT 530
                      ******************                                          

consensus_9032#1      AGCTGCATCGCAACGATTGCGACGATTGGAGGGAGTTCTTTCCCGATGGATCGCGTCCCC 582
consensus_9032#3      ------------------------------------------------------------
consensus_9032#0      AGCTGCATCGCAACGATTGCGACGATGGAGGAG---TTCTTCCCGATGGATCGC-TCCCG 576
consensus_9032#2      AGCTGCATCGCAACGATTGCGACGATGGAGGAG---TTCTTCCCGATGGATCGC-TCCCG 586
                                                                                  

consensus_9032#1      GCTATCCGGGCGCTAGGTGGCGTTGGATTGAAACGGGTTCATTTCGTACCCCTTNGCCTG 642
consensus_9032#3      ------------------------------------------------------------
consensus_9032#0      CTATCCGGCGCTGGTGGCGTGGATTGAACGGCTCAGTCGTACCTTGCCTGAGTACGACCA 636
consensus_9032#2      CTATCCGGCGCTGGTGGCGTGGATTGAACGGCTCAGTCGTACCCTGCCTGAGTACGACCA 646
                                                                                  

consensus_9032#1      AGTTAACGACCAGGCTCCACCAGGGAAGGGGGCGGTAGAGTTTGCAGAAAATCTTGNTGA 702
consensus_9032#3      ------------------------------------------------------------
consensus_9032#0      GCTCAACCAGGAAGGGGCGGTAGAGTTTGCAGAAATCTGTGAATCGCTGAGGCTTAAAAA 696
consensus_9032#2      GCTCAACCAGGAAGGGGCGGTAGAGTTTGCAGAAATCTGTGAATCGTTGAGGC------- 699
                                                                                  

consensus_9032#1      ATTCGTGAGANTTAAAATGGGGCGTCGGTCGNTTGAAATTAAAGCCCGAATTCAAGGGTT 762
consensus_9032#3      ------------------------------------------------------------
consensus_9032#0      TGGGGCGTCGGGTCCGCTTGCGAAAGTAAAAGCCACGATTTCCCAAGGGGTTTTGGACCA 756
consensus_9032#2      ------------------------------------------------------------
                                                                                  

consensus_9032#1      TNGCCCAG----------------- 770
consensus_9032#3      -------------------------
consensus_9032#0      CTTTCACCGGGGANATTTCCTGGTC 781
consensus_9032#2      -------------------------