cluster # 9033

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Anopheles gambiae
cluster # 9033 cluster # 9033 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9033#0 length = 1260 sequences # 10

consensus_9033#1 length = 956 sequences # 2
consensus_9033#2 length = 708 sequences # 1

consensusID : consensus_9033#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1260
fasta sequence

                              [TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG-GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC-AAGGGCGAT-CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG-ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC--GCTGCTCAACATGCTGAACATCT--CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG-CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG-ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAACAAAAAGGCCACATGTGCCCCAGCCGCC]

[+] EMBL CNS09DLO             [TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTTGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACA CAAGAACGACGACCCACGCCGACCGCATGCG                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09C6M             [                           TAGCGACCG TTTGTTCTTAAATTTCTTTACGAATCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGATGCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGGGCCG TCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09I51             [                                                                                         GAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGCGCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAG                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08EIS             [                                                                                                                                                ACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGTTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTG                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08EK9             [                                                                                                                                                           AGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCGAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAACGTGGAGT                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09DLP             [                                                                                                                                                                                                                                                                              GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTAAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAAGGGCGAT CTGGCCGAGATCCGCGAAAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG AAACTTCCGCTCGAGGTTGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACAACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAAC                           ]
[-] EMBL CNS08EKA             [                                                                                                                                                                                                                                                                               CCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG AAACTTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATACAGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGA                                                             ]
[-] EMBL CNS08EIT             [                                                                                                                                                                                                                                                                                                                           CTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT TTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGAATCG TCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCT  CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGTTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACAACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAA                                                               ]
[+] EMBL CNS08FTW             [                                                                                                                                                                                                                                                                                                                                                                                                                GGTGCGTG CCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACA CAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAACAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCCAGCCGCC]
[-] EMBL CNS09I52             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC  GCTGCTCAACATGCTGAACTTCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGACAACAACTGATTCCGCTGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_9033#0
TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGA
GTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATT
TCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACA
ATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGC
TGATGGGCAAGAACACCATGATGCGCAAGGCCATTCGCGGGCATCTGGAGAACAACCAGA
ACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGGGCG
ATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCG
GTGCGATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGA
AGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAA
TCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGC
TGCTCAACATGCTGAACATCTCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGT
GTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTT
CCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGT
CAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGC
TGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGA
TGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCG
ACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATC
TACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAA
TGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACC
AACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAG
GAAACAATCCGGAAAGAAAAAAAACAAAAAAACAAAAAGGCCACATGTGCCCCAGCCGCC

consensusID : consensus_9033#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 956
fasta sequence

                              [TTGTTTTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCT]

[+] EMBL CNS093TA             [TTGTTTTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCT]
[+] EMBL CNS09KSE             [                       ATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCAACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTGGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAG                     ]




>consensus_9033#1
TTGTTTTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTAC
GAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTG
GATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAAC
TATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGG
TGGACAAAGAAGTAGTGGTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGC
TATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGC
GGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCG
ATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTC
GAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCT
CATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTA
CGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTC
GTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAAC
GTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGC
GTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGG
GCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTC
AAATGATCGATCGAATGATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCT

consensusID : consensus_9033#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 708
fasta sequence

                              [GACCTCACCAGAAGCACAAAACCACGAGCTCTCGAGAGTGGGAGCGCCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTCGCGCGCGGCTGTGATGTACCGCTGGCGCACTACAAAACGATGCACTGCCAGCCGGTCGGCAACCGTCCGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCGTGCACGTGGACTGTGCGGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTGCTGCTCGACCGGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAACGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCCACTGAACCGAAGCTACAGTGCAAGT]

[+] EMBL CNS08NCT             [GACCTCACCAGAAGCACAAAACCACGAGCTCTCGAGAGTGGGAGCGCCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTCGCGCGCGGCTGTGATGTACCGCTGGCGCACTACAAAACGATGCACTGCCAGCCGGTCGGCAACCGTCCGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCGTGCACGTGGACTGTGCGGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTGCTGCTCGACCGGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAACGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCCACTGAACCGAAGCTACAGTGCAAGT]




>consensus_9033#2
GACCTCACCAGAAGCACAAAACCACGAGCTCTCGAGAGTGGGAGCGCCAAAAAAAATGCA
TTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTCGCGCGCGGCTGTGA
TGTACCGCTGGCGCACTACAAAACGATGCACTGCCAGCCGGTCGGCAACCGTCCGGACGG
TTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTT
TAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTGTCCCAGTTTTG
CTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCGTGCACGT
GGACTGTGCGGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCC
GCAGAGCTGCTGCTCGACCGGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACG
GCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTG
CCGGACGCGGAGGTTTTTCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCG
ATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAACGGATATTTTTGTGA
AGGGCACCGGTAGTAAGCCGGCCACTGAACCGAAGCTACAGTGCAAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9033#1      ------------------------------------------------------------
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGA 60
                                                                                  

consensus_9033#1      -------------------------------------------------------TTGTT 5
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      GTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATT 120
                                                                                  

consensus_9033#1      TTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAA 65
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      TCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCA--TCGTCGGCGCTGA 178
                                                                                  

consensus_9033#1      CAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAG 125
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      CAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGT 238
                                                                                  

consensus_9033#1      TGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCA 185
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      GCTGATGGGCAAGAACACCATGATGCGCAAGGCCATTCGCGGGCATCTGGAGAACAACCA 298
                                                                                  

consensus_9033#1      CAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGAC 245
consensus_9033#2      ------------GACCT-CACCAGAAGCACAAAACCA-CGAGCTCTCGAGAGTGGGAGCG 46
consensus_9033#0      GAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCT-TCGTGTTCACCAAGG 357
                                  *     ** *   * **          * *** ***            

consensus_9033#1      AAAGAAGTAGTG-GTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATT 304
consensus_9033#2      CCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTC 106
consensus_9033#0      GCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTG 417
                                 *   *               *          ***    *     *  * 

consensus_9033#1      CCCTGTTGATCTTTTTAATTTC--ATGCTAGTGGATAATACGTCGACGTATCGGCGGCGG 362
consensus_9033#2      GCGCGCGG----CTGTGATGTA--CCGCTGGCGCACTACAAAACGATGCACTGCCAGCCG 160
consensus_9033#0      CCGGTGCGATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGG 477
                       *     *     *    *       *            *   *   *         * *

consensus_9033#1      --CAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCG 420
consensus_9033#2      GTCGGCAACCGTCCGGACGGTTGCCCGGAA-----AGGTACGACTGCCCCTCGATAACGG 215
consensus_9033#0      AGAAGACCTCCTTCTTCCAGGCCCTGTCGATCC--CGACCAAGATTTCCAAGGGTACGAT 535
                          *      * *     *   *            *           *     **    

consensus_9033#1      ATCATTGCACAGTGGCA-GCTCTTCCTGGACC--TGCTGGAAGTACAGATGGCTGGCAAG 477
consensus_9033#2      CGCAC--GACAGCAGCA-AGTGTTACTTTAAT--GGCAAAACGTACGAC--ATCGATCAG 268
consensus_9033#0      TGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGC--GCTTCCGAG 593
                         *     **    *       * **  *     **   * *  *            **

consensus_9033#1      GTCGAGCAG--------GAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCA--T 527
consensus_9033#2      CCCGTGCCG--------GACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACT--G 318
consensus_9033#0      GCCACGCTGCTCAACATGCTGAACATCTCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGG 653
                        *  ** *        *  *      *  *  *  *      *     *     *    

consensus_9033#1      CCAAACATTCGCTC---ATCC--TTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCC 582
consensus_9033#2      CCG---ATCCGCTA---ATCCGATTGCTAAATTCCGCTGCGTGCACGTG---GACTGTGC 369
consensus_9033#0      CTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCA 713
                      *        ****    ***   *  *  *     ***               *  *   

consensus_9033#1      ATAGACTGCGGTAACGTACGGCCGTAGAAATTA--TTCGCAAGCGACACCAGCTGCGATG 640
consensus_9033#2      GGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTG 429
consensus_9033#0      ACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCG 773
                         *  *            *                 **          *      *  *

consensus_9033#1      AGCCTTGATTTTCGAGAT--TCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCAC 698
consensus_9033#2      CTGCTCGAC---CGGGA----CGGTTGCCCGGAAAGGTACG--ACTGCCCCTCGA--TAA 478
consensus_9033#0      AAAC--GGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAA-CGA 830
                         *  *      * *     *       **   * *   *   ** *      *     

consensus_9033#1      CTGTGCTGGAAGC-GCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCAC 757
consensus_9033#2      CGGCGCACGACA--GCAGCAAGTGTTAC------TTTAATGGCAAAACGTACGACATCGA 530
consensus_9033#0      CTGCTTCCGCTGCCGCCCCAGCTGCCAA------GGCTGAGGAGAAGAAGGTGGAGTC-- 882
                      * *     *     **   *   *                 *   *           *  

consensus_9033#1      TCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTC--TCGCAGGTAGCTGAG 815
consensus_9033#2      TCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTC--TG--CCGCCTGCTACTGC- 585
consensus_9033#0      CGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGC- 941
                        **  **      * *  * *  * *     *  *     *         *   * *  

consensus_9033#1      TGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGA-GCGACCGTTA 874
consensus_9033#2      CGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAA 645
consensus_9033#0      AAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTG 1001
                                  *     *              * **  *           *        

consensus_9033#1      CCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAA-C 933
consensus_9033#2      CGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCC-----ACTGAACCGAAGCTA-C 699
consensus_9033#0      TGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTC 1061
                        * *   *     *      *           **                        *

consensus_9033#1      AGTGCTCGAGGAATTCCGCAGCT------------------------------------- 956
consensus_9033#2      AGTGCAAGT--------------------------------------------------- 708
consensus_9033#0      AAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATA 1121
                      *  **  *                                                    

consensus_9033#1      ------------------------------------------------------------
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      CGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGG 1181
                                                                                  

consensus_9033#1      ------------------------------------------------------------
consensus_9033#2      ------------------------------------------------------------
consensus_9033#0      TGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAACAAAAAGGC 1241
                                                                                  

consensus_9033#1      -------------------
consensus_9033#2      -------------------
consensus_9033#0      CACATGTGCCCCAGCCGCC 1260