cluster # 9046

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Anopheles gambiae
cluster # 9046 cluster # 9046 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9046#0 length = 1005 sequences # 4
consensus_9046#1 length = 903 sequences # 1

consensus_9046#2 length = 879 sequences # 7
consensus_9046#3 length = 559 sequences # 2

consensusID : consensus_9046#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1005
fasta sequence

                              [TTCGTTTGTAGTAGCCAATATTTAAACCACTCGTAGTGTGTGTAGTGCTTGACGATCGCCTCTTTCCTGCACACTGGTACTGATTCTGCATATTTCTTTCTTTGCTATTCCCTTCGCTGGTTCGCCGTTTTGCACCGTAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACAACAAGGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGGCGTGGAAGCTGCAGGCTCGCCCGTCCGCCGCCATCCTGTTCGTGGTGGAGAACGTGACGTACAACATCTGCGACCAGCGCTTTCACGAGTTTTACATCCGCGAAACGTACCCGCACGTGGCCGTCGTGCGCCGCACGCTGACGCAGATCGGCGAGCAGGGCCGGCTCGGCCCGGGCAAGGAGCTGCTGGTGGGCGACGTCGAGGCAAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCCGTCGCGATCAAGTGCCCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCGGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCTAAGATCGAAGCGATCCGGGACATCTTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGTGGCGCTCGCGCTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGGCAACAACGTGTACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACGGTCCGCCTGGATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTACATGGTACGGCCGAATGGGCCGGTGCCGCCCCCGCTGGTCCAGCTCGTGTCCGAGCTCGGCATCTTCGGTGCCATCATCGGCTCCAAGGACAAGGTGCTGTACAACAAGCAGATCGGGCACATG]

[+] EMBL BX606255             [TTCGTTTGTAGTAGCCAATATTTAAACCACTCGTAGTGTGTGTAGTGCTTGACGATCGCCTCTTTCCTGCACACTGGTACTGATTCTGCATATTTCTTTCTTTGCTATTCCCTTCGCTGGTTCGCCGTTTTGCACCGTAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACAACAAGGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGGCGTGGAAGCTGCAGGCTCGCCCGTCCGCCGCCATCCTGTTCGTGGTGGAGAACGTGACGTACAACATCTGCGACCAGCGCTTTCACGAGTTTTACATCCGCGAAACGTACCCGCACGTGGCCGTCGTGCGCCGCACGCTGACGCAGATCGGCGAGCAGGGCCGGCTCGGCCCGGGCAAGGAGCTGCTGGTGGGCGACGTCGAGGCAAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCCGTCGCGATCAAGTGCCCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCGGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCTAAGATCGAAGCGATCCGGGACATCTTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGTGGCGCTCGCGCTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGGCAACAACGTGTACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACGGTCCGCCTGGATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTA                                                                                                                            ]
[+] EMBL BM614172             [                                                                                                                                                                                                                                                                                                                                                      CCGCACGTGGCCGTCGTGCGCCGCACGCTGACGCAGATCGGCGAGCAGGGCCGGCTCGGCCCGGGCAAGGAGCTGCTGGTGGGCGACGTCGAGGCAAGCGTGGTGTACTTCCGGGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCGGTCGCGATCAAGTGCCCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCAGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCCAAGATCGAAGCGATCCGGGACATCTTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGTGGCGCTCGCGCTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGGCAACAACGTGTACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACGGTCCGCCTGGATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTACATGGTACGGCCGAATGGGCCGGTGCCGCCCCCGCTGGTCCAGCTCGTGTCCGAGCTCGGCATCTTCGGTGCCATCATCGGCTCCAAGGACAAGGTGCTGTACAACAAGCAGATCGGGCACATG]
[+] EMBL BX616502             [                                                                                                                                                                                                                                                                                                                                                                                                                GCCCGGGCAAGGAGCTGCTGGTGGGCGACGTCGAGGCAAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCCGTCGCGATCAAGTGCCCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCGGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGC                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX611556             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCCGTCGCGATCAAGTGCCCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCGGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCTAAGATCGAAGCGATCCGGGACATCTTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGTGGCGCTCGCGCTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGGCAACAACGTGTACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACGGTCCGCCTGGATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTACATGGTACGGCCGAATGGGCCGGTGCCGCCCCCGCTGGTCCAGCTCGTGTCCGAGCTCGGCATCTTCGGTGCCATCATCGGCTCCAAGGACAAGGTG                           ]




>consensus_9046#0
TTCGTTTGTAGTAGCCAATATTTAAACCACTCGTAGTGTGTGTAGTGCTTGACGATCGCC
TCTTTCCTGCACACTGGTACTGATTCTGCATATTTCTTTCTTTGCTATTCCCTTCGCTGG
TTCGCCGTTTTGCACCGTAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTC
AATCTGCCCGACAACAAGGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGGCGTGGAAG
CTGCAGGCTCGCCCGTCCGCCGCCATCCTGTTCGTGGTGGAGAACGTGACGTACAACATC
TGCGACCAGCGCTTTCACGAGTTTTACATCCGCGAAACGTACCCGCACGTGGCCGTCGTG
CGCCGCACGCTGACGCAGATCGGCGAGCAGGGCCGGCTCGGCCCGGGCAAGGAGCTGCTG
GTGGGCGACGTCGAGGCAAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTAC
TTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCCGTCGCGATCAAGTGC
CCCTCGATCCAGTACCATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCCAAGCCG
GACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCTAAGATCGAAGCGATCCGGGACATC
TTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGTGGCGCTCGCG
CTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGGCAACAACGTG
TACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACGGTCCGCCTGG
ATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTACATGGTACGGCCGAATGGG
CCGGTGCCGCCCCCGCTGGTCCAGCTCGTGTCCGAGCTCGGCATCTTCGGTGCCATCATC
GGCTCCAAGGACAAGGTGCTGTACAACAAGCAGATCGGGCACATG

consensusID : consensus_9046#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 903
fasta sequence

                              [CAGATTCGCGCAGCAGTTAGAGGCAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCGTCGCGATCAAGTGCCCTCGATCCAGTACATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCAAGCCGGACGTGCTGCGCCGGTTCGGTGGGCGATNACNCGCCTAAAAGGAATCTCAAAGCGAATCCCGGGGGACATTCTTTTTAACCCGGGGCTTNTAACTTCGCTTCCGAAACCCGGGAAGGGAAGGGGGCCGGGGCGGAACACGNAAAGGCGCCGGGTTGTGACGGGCCTCCGCGNGCCCTTGGGGCCCGGAACCCCGGGAAGAGCCCGGGTTAACAGGTTGCCTTGGAAAGGCCCGGCAAGGGCCGCCGGAACGTGGTGGCCAGGTGCCTGGTGGTCGAAACCAAACACGGTTGGCTTAACCCGGCGGGGTTTGGGCCCCGGNGCGAAGACGCCAAATTTTTCTCCCCCCCGTGGGTGCGCCCTAGGGGGGCCCCCCNTTTGGGGCGCCACNGTGGGGGCGCNGGANAATTTGGGAAGCGCNCNCAAGAGGCGCCTGGGCCCCGGCGGGAGAAACCCGGGGGNGTTGCCCCCCCCCNGGTGCGGCCCCCTTTGGGTCGGGCACGTTATAATCCCCTTTTGGGCACGTTGTTGGGGGCGACACGAGGCGCCNGCGCGCGACNATTTCTCCTTTGTTTTTTTNCCCCCCNTTGGGGGTGGTCCCCCCGCCCCTTNTGGTGTTTGTCGCCCAAAAGACGACCCTACTGNGGGNGGGTTTTANACCCCCACCTTTTTTGGTGGGGGTGTTTAAACCACCGGTGGGGGCCGCCTGGCNAGACAACCCTT]

[+] EMBL AL697096             [CAGATTCGCGCAGCAGTTAGAGGCAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCGTCGCGATCAAGTGCCCTCGATCCAGTACATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCAAGCCGGACGTGCTGCGCCGGTTCGGTGGGCGATNACNCGCCTAAAAGGAATCTCAAAGCGAATCCCGGGGGACATTCTTTTTAACCCGGGGCTTNTAACTTCGCTTCCGAAACCCGGGAAGGGAAGGGGGCCGGGGCGGAACACGNAAAGGCGCCGGGTTGTGACGGGCCTCCGCGNGCCCTTGGGGCCCGGAACCCCGGGAAGAGCCCGGGTTAACAGGTTGCCTTGGAAAGGCCCGGCAAGGGCCGCCGGAACGTGGTGGCCAGGTGCCTGGTGGTCGAAACCAAACACGGTTGGCTTAACCCGGCGGGGTTTGGGCCCCGGNGCGAAGACGCCAAATTTTTCTCCCCCCCGTGGGTGCGCCCTAGGGGGGCCCCCCNTTTGGGGCGCCACNGTGGGGGCGCNGGANAATTTGGGAAGCGCNCNCAAGAGGCGCCTGGGCCCCGGCGGGAGAAACCCGGGGGNGTTGCCCCCCCCCNGGTGCGGCCCCCTTTGGGTCGGGCACGTTATAATCCCCTTTTGGGCACGTTGTTGGGGGCGACACGAGGCGCCNGCGCGCGACNATTTCTCCTTTGTTTTTTTNCCCCCCNTTGGGGGTGGTCCCCCCGCCCCTTNTGGTGTTTGTCGCCCAAAAGACGACCCTACTGNGGGNGGGTTTTANACCCCCACCTTTTTTGGTGGGGGTGTTTAAACCACCGGTGGGGGCCGCCTGGCNAGACAACCCTT]




>consensus_9046#1
CAGATTCGCGCAGCAGTTAGAGGCAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGC
CACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTCGTCGCGATCA
AGTGCCCTCGATCCAGTACATCTGGCCGGCACGAAGAAGGTGCAGCAGGCGCTGGCAAGC
CGGACGTGCTGCGCCGGTTCGGTGGGCGATNACNCGCCTAAAAGGAATCTCAAAGCGAAT
CCCGGGGGACATTCTTTTTAACCCGGGGCTTNTAACTTCGCTTCCGAAACCCGGGAAGGG
AAGGGGGCCGGGGCGGAACACGNAAAGGCGCCGGGTTGTGACGGGCCTCCGCGNGCCCTT
GGGGCCCGGAACCCCGGGAAGAGCCCGGGTTAACAGGTTGCCTTGGAAAGGCCCGGCAAG
GGCCGCCGGAACGTGGTGGCCAGGTGCCTGGTGGTCGAAACCAAACACGGTTGGCTTAAC
CCGGCGGGGTTTGGGCCCCGGNGCGAAGACGCCAAATTTTTCTCCCCCCCGTGGGTGCGC
CCTAGGGGGGCCCCCCNTTTGGGGCGCCACNGTGGGGGCGCNGGANAATTTGGGAAGCGC
NCNCAAGAGGCGCCTGGGCCCCGGCGGGAGAAACCCGGGGGNGTTGCCCCCCCCCNGGTG
CGGCCCCCTTTGGGTCGGGCACGTTATAATCCCCTTTTGGGCACGTTGTTGGGGGCGACA
CGAGGCGCCNGCGCGCGACNATTTCTCCTTTGTTTTTTTNCCCCCCNTTGGGGGTGGTCC
CCCCGCCCCTTNTGGTGTTTGTCGCCCAAAAGACGACCCTACTGNGGGNGGGTTTTANAC
CCCCACCTTTTTTGGTGGGGGTGTTTAAACCACCGGTGGGGGCCGCCTGGCNAGACAACC
CTT

consensusID : consensus_9046#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 879
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCACACTCGGGCTGCCGGGCCGCTGGACAACTGTGTGCCGGCCG-GTTTTATCTTATCAGTTTGCCTCGTTTTGTGTTTCACCATTCCGCAGTGTGTGTGTTTTTTTTTTTGCAGCGTGACAATACAGACGGCTGATTTCAGTCCGGCAGAAGCACACAAACGCCGTGTTGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGC-GGTCCAAGCAGGAC-TTCAACCC--GGA-TGCGCTGCTG-TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACAACAAAGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGG]

[+] EMBL BM623820             [CCGCCCACGCGTCCGCCCACGCGTCCGCACACTCGGGCTGCCGGGCCGCTGGACAACTGTGTGCCGGCCGTGTTTTATCTTATCAGTTTGCCTCGTTTTGTGTTTCACCATTCCGCAGTGTGTGTGTTTTTTTTTTTGCAGCGTGACAATACAGACGGCTGATTTCAGGCCGGCAGAAGCACACAAACGCCGTGTTGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCAATGC GGTCCAAGCAGGAC TTCAACCC  GGA TGCGCTGCTG TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACATGCGGTGGCGCACGACAGtc                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM593703             [                                                                   CCG GTTTTATCTTATCAGTTTGCCTCGTTTTGTGTTTCACCATTCCTCAGTGTGTGTGTGTGTTTTTTTGCAGCGTGACAATACAGACGGCTGATTTCAGTCCGGCAGAAGCACACAAACGCCGTGTTGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGC GGTCCAAGCAGGAC TTCAACCC  GGA TGCGCTGCTG TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCC                                                                                                                                     ]
[+] EMBL AGA282022            [                                                                                                                                                              CTGATTTCAGTCCGGGAGCCCCACACAAACGCCGTGAAAAGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCANTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTATTATCGCCGCCATGTGTATGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AL693675             [                                                                                                                                                                                         cgaggctTGTTGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGGCAAGGACTGGGCGATCATGCACGGTGCCG GATGCGGGTCCAAGCAGGACTTTCAACCCCGGGATTGCGCTGCTGTTTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCA                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX606778             [                                                                                                                                                                                                   TGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGC GGTCCAAGCAGGAC TTCAACCC  GGA TGCGCTGCTG TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACAACAAAGCCCTGTCCGGGCTG                   ]
[+] EMBL BM650933             [                                                                                                                                                                                                   ccGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGC GGTCCAAGCAGGAC TTCAACCC  GGA TGCGCTGCTG TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACAACAAGGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGG]
[+] EMBL BX606105             [                                                                                                                                                                                                       TCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGC GGTCCAAGCAGGAC TTCAACCC  GGA TGCGCTGCTG TTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACATGCGGTGGCGCACGAC                                                                                                                                                                                                                                                                                                                                     ]




>consensus_9046#2
CCGCCCACGCGTCCGCCCACGCGTCCGCACACTCGGGCTGCCGGGCCGCTGGACAACTGT
GTGCCGGCCGGTTTTATCTTATCAGTTTGCCTCGTTTTGTGTTTCACCATTCCGCAGTGT
GTGTGTTTTTTTTTTTGCAGCGTGACAATACAGACGGCTGATTTCAGTCCGGCAGAAGCA
CACAAACGCCGTGTTGGGTCGCAGTAGCGAAATCGGAAGACAATCGTTCTCCAAGTGGAG
TTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTA
CGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGG
AGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGCGGTCCAAGC
AGGACTTCAACCCGGATGCGCTGCTGTTTGCACCGTTCATACTGACGCCGAGCTCGTTTC
CGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACG
CGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACG
AGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGA
CCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGC
AGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGA
TGCATAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGTCAATCTGCCCGACA
ACAAAGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGG

consensusID : consensus_9046#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence

                              [CCGCGGACGCGTGGGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGCGGTCCAAGCAGGACTTCAACCCGGATGCGCTGCTGTTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCT]

[+] EMBL BM652056             [CCGCGGACGCGTGGGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGCGGTCCAAGCAGGACTTCAACCCGGATGCGCTGCTGTTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCT]
[+] EMBL AGA282814            [                                                                                                                                                                                                   TGCTGTTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCAAAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGGCGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTACCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAACGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGGAGA                                                                            ]




>consensus_9046#3
CCGCGGACGCGTGGGCGCCCGGAAAGTCGCCCAGTAGTATCGCCGCCATGTGTACGCCGT
CGAAAACGCTCCAGTCCTGCGTGCCGTTCCCGCTGGACGACGCGCTGCTGCAGGAGGTGG
TGGAGAAGGCCAAGGACTGGGCGATCATGCACGGTGCCGCGATGCGGTCCAAGCAGGACT
TCAACCCGGATGCGCTGCTGTTTGCACCGTTCATACTGACGCCGAGCTCGTTTCCGCGCA
AAGAGTTCCAGAAGGCGGTCGAGCTGCAGCCGCTGCTGAACGAGCTGATACACGCGGTGG
CGCACGACAGCCAGTTTCTGCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTA
CCCGGGCCCTCATCGCCATCTACCGCACCGTGCTGGACGAGGGCATTGCGCAGACCGTAA
CGCTCGCACTACTGCGGTCAGATTATTTGCCCAACTTTTCGGACACCATCAAGCAGGTGG
AGATAAACACGATCGCCTCCAGCTTCGGCGGTATCTCGACCATTATGACACCGATGCATA
GCTACATTCTGTCGGAGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9046#2      ------------------CCGCCCACGCGTCCGCCCACGCGTCCGCACACTCGGGCTGCC 42
consensus_9046#3      ------------------------------------------------------------
consensus_9046#0      TTCGTTTGTAGTAGCCAATATTTAAACCACTCGTAGTGTGTGTAGTGCTTGACGATCGCC 60
consensus_9046#1      ------------------------------------------------------------
                                                                                  

consensus_9046#2      GGGCCGCTGGACAACTGTGTGCCGGCCGGTTTTATCTTATCAGTTTGCCTCGTTTTGTGT 102
consensus_9046#3      ------------------------------------------------------------
consensus_9046#0      TCTTTCCTGCACACTGGTACTGATTCTGCATATTTCTTTCTTTGCTATTCCCTTCGCTGG 120
consensus_9046#1      ---------CAGATTCGCGCAGCAGTTAGAGGCAGCGTGGTGTACT-TCCGAGCCGGGTA 50
                                                                                  

consensus_9046#2      TTCACCATTCCGCAGTGTGTGTGTTTTTTTTTTTGCAGCGTGACAATACAGACGGCTGAT 162
consensus_9046#3      ------------------------------------------------------------
consensus_9046#0      TTCGCCGTTTTGCACCGTA-GCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCTGGT 179
consensus_9046#1      CGAGCCGGGCCACTACTTCGGTGCGGGCGAGTGGGACGCCCGGCTGCTGATCGAGCGGTC 110
                                                                                  

consensus_9046#2      T--TCAGTCCGGCAGAAGCACACAAACGCCGTGTTGGGTCGCAGTAGCGAAATCGGAAGA 220
consensus_9046#3      ------------------------------------------------------------
consensus_9046#0      CAATCTGCCCGACAACAAGGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGGCGTGGAA 239
consensus_9046#1      GTCGCGATCAAGTGCCCTCGATCCAGTACATCTGGCCGGCACGAAGAAGGTGCAGCAGGC 170
                                                                                  

consensus_9046#2      CAAT-CGTTCTCCAAGTGGAGTTGCAGTTGTGGAATTGGTCGCGCCCGGAAAGT----CG 275
consensus_9046#3      ---------------------------CCGCGGACGCGTGGGCGCCCGGAAAGT----CG 29
consensus_9046#0      GCTG-CAGGCTCGCCCGTCCGCCGCCATCCTGTTCGTGGTGGAGAACGTGACGTACAACA 298
consensus_9046#1      GCTGGCAAGCCGGACGTGCTGCGCCGGTTCGGTGGGCGATNACNCGCCTAAAAGG---AA 227
                                                     *     *        *   *         

consensus_9046#2      CCCAGTAGTATCGCCGCCATGTGT---ACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCG 332
consensus_9046#3      CCCAGTAGTATCGCCGCCATGTGT---ACGCCGTCGAAAACGCTCCAGTCCTGCGTGCCG 86
consensus_9046#0      TCTGCGACCAGCGCTTTCACGAGTTTTACATCCGCGAAACGTACCCGCACGTGGCCGTCG 358
consensus_9046#1      TCTCAAAGCGAATCCCGGGGGACATTCTTTTTAACCCGGGGCTTNTA-ACTTCGCTTCCG 286
                       *    *      *      *             *              * *      **

consensus_9046#2      TTC-CCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGC-GA 390
consensus_9046#3      TTC-CCGCTGGACGACGCGCTGCTGCAGGAGGTGGTGGAGAAGGCCAAGGACTGGGC-GA 144
consensus_9046#0      TGCGCCGCACGCTGACGCAGATCGGCGAGCAGGGCCGGCTCGGCCCGGGCAAGGAGCTGC 418
consensus_9046#1      AAACCCGGGAAGGGAAGGGGGCCGGGGCGGAACACGNAAAGGCGCCGGGTTGTGACGGGC 346
                          ***      ** *     * *   *               **  *    *    * 

consensus_9046#2      TCATGCACGGTGCCGCGAT--GCGGTCCAAGCAGGACTTCAACCCGGATGCGCTGCTGTT 448
consensus_9046#3      TCATGCACGGTGCCGCGAT--GCGGTCCAAGCAGGACTTCAACCCGGATGCGCTGCTGTT 202
consensus_9046#0      TGGTGGGCGACGTCGAG----GCAAGCGTGGTGTACTTCCGAGCCGGGTACGAGCCGGGC 474
consensus_9046#1      CTCCGCGNGCCCTTGGGGCCCGGAACCCCGGGAAGAGCCCGGGTTAACAGGTTGCCTTGG 406
                          *   *     * *    *    *   *        *               *    

consensus_9046#2      TGCACCGTTCATACTGACGCCGAGCTCGTT-T--CCGCGCAAAGAGTTCCAGAAGGCGGT 505
consensus_9046#3      TGCACCGTTCATACTGACGCCGAGCTCGTT-T--CCGCGCAAAGAGTTCCAGAAGGCGGT 259
consensus_9046#0      CACTACTTCGGTGCGGGCGAGTGGGACGCC-CGGCTGCTGATCGAGCGGTCCGTCGCGAT 533
consensus_9046#1      AAAGGC-CCGGCAAGGGCCGCCGGAACGTGGTGGCCAGGTGCCTGGTGGTCGAAACCAAA 465
                           *         * *     *  **      *          *          *   

consensus_9046#2      CGAGCTGCAGCCGCTGCTGAACGAGCTGA---TACACGCGGTGGCG-CACGACAGCCAGT 561
consensus_9046#3      CGAGCTGCAGCCGCTGCTGAACGAGCTGA---TACACGCGGTGGCG-CACGACAGCCAGT 315
consensus_9046#0      CAAGTGCCCCTCGATCCAGTACCATCTGG---CCGGCACGAAGAAGGTGCAGCAGGCGCT 590
consensus_9046#1      CACGGTTGGCTTAACCCGGCGGGGTTTGGGCCCCGGNGCGAAGACGCCAAATTTTTCTCC 525
                      *  *            * *       **          **  *  *          *   

consensus_9046#2      TTCT--GCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTA---CCCGGGCCCT 616
consensus_9046#3      TTCT--GCTCGCCACGCTCAGCTCCACCGAGAAGGTGGACGAGTTTA---CCCGGGCCCT 370
consensus_9046#0      GGCCAAGCCGGACGTGCTGCGCCGGTTCGTGGGCGATGACGCGCCTAAGATCGAAGCGAT 650
consensus_9046#1      CCCCCGTGGGTGCGCCCTAGGGGGGCCCCCCNTTTGGGGCGCCACNG---TGGGGGCG-- 580
                        *         *   **  *      *         * **              **   

consensus_9046#2      CATCGCCATCT--ACCGCACCGTGCT----------GGACGAGGGCATTGCGCAGACCGT 664
consensus_9046#3      CATCGCCATCT--ACCGCACCGTGCT----------GGACGAGGGCATTGCGCAGACCGT 418
consensus_9046#0      CCGGGACATCTTTACCGGGCTGTACTCGCTCGACCGGGAGGAGGGCGGCGACGAGGCGGT 710
consensus_9046#1      CNGGANAATTT-----GGGAAGCGCNCNCAAGA--GGCGCCTGGGCCCCGGCGGGAGAAA 633
                      *      ** *     *    *  *           *     ****   *    *     

consensus_9046#2      AACGCTCGCACTACTGCGGTCAGAT---TATTTGCCCAACTTTTCG------------GA 709
consensus_9046#3      AACGCTCGCACTACTGCGGTCAGAT---TATTTGCCCAACTTTTCG------------GA 463
consensus_9046#0      GGCGCTCGCGCTGGCCGACCCGGAGCGGTACGTGCTGAAGCCGCAGCGCGAGGGCGGCGG 770
consensus_9046#1      CCCGGGGGNGTTGCCCCCCCCCNGGTGCGGCCCCCTTTGGGTCGGGCACG-------TTA 686
                        **   *   *        *             *          *              

consensus_9046#2      CACCATCAAGCAGGTGGAGATAAACACGATCGCCTC-CAGCTT-----CGGCGGTATCTC 763
consensus_9046#3      CACCATCAAGCAGGTGGAGATAAACACGATCGCCTC-CAGCTT-----CGGCGGTATCTC 517
consensus_9046#0      CAACAACGTGTACGGTGCGGACATCCCGGCCGCCCTGCAGGCGATGAGCAGCGCGGAACG 830
consensus_9046#1      TAATCCCCTTTTGGGCACG-TTGTTGGGGGCGACAC-GAGGCGC----CNGCGCGCGACN 740
                       *    *      *    *        *  ** *    **        * ***       

consensus_9046#2      GACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCTTGGACATCGGGAAAAGCT 823
consensus_9046#3      GACCATTATGACACCGATGCATAGCTACATTCTGTCGGAGCT------------------ 559
consensus_9046#0      GTCCGCCTGGATACTGATGGAGCGCATCTTTCCGCCCCTGTCCACCGGGTACATGGTACG 890
consensus_9046#1      ATTTCTC----CTTTGTTTTTTTNCCCCCCNTTGGGGGTGGTCCCCCCGCCCCTTNTGGT 796
                                     * *      *  *     *     *                    

consensus_9046#2      GGTCAATCTGCCCGACAACAAAGCCCTGTCCGGGCTGTGCGATGCGATGGTTGAGG---- 879
consensus_9046#3      ------------------------------------------------------------
consensus_9046#0      GCCGAATGGGCCGGTGCCGCCCCCGCTGGTCCAGCTCGTGTCCGAGCTCGGCATCTTCGG 950
consensus_9046#1      GTTTGTCGCCCAAAAGACGACCCTACTGNGGGNGGGTTT-TANACCCCCACCTTTTTTGG 855
                                                                                  

consensus_9046#2      -------------------------------------------------------
consensus_9046#3      -------------------------------------------------------
consensus_9046#0      TGCCATCATCGGCTCCAAGGACAAGGTGCTGTACAACAAGCAGATCGGGCACATG 1005
consensus_9046#1      TGGGGGTGTTTAAACCACCGGTGGGG-GCCGCCTGGCNAGACAACCCTT------ 903