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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1219 fasta sequence
[CAATAAC-GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG-AACACAAACACAAACGCCC-ATCGCAAGGGTCCCACGAACTGGCT--------GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG-TC-TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT-CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT----AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC-GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG-TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA-CGACTACGTCCCGGAGCTGTACGCCACCTTTAC-GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC-CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG-----CTC----TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG-AAAAAAAGT-ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA]
[+] EMBL CNS08P6K [ AATAACGGGAACA TGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGGCGCAGACGCAACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTTCTTTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCA CAATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGAC ]
[+] EMBL CNS08Z4M [cgcTACC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACACCC ATCGCAAGGGTCCCACGGACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCT ]
[+] EMBL CNS08V91 [ AC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCTATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGTGCGGCGAGGCAGTAACGTgc ]
[+] EMBL AY187040 [ gtCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAAACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCTGTCCGTTCGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGGTCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGTTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTTAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCTCACACACACGCGCTCCTCCATGTCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAAGT ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA]
[+] EMBL CNS08VJ7 [ TGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCCAATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGCCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAG AATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACCGGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGA ]
[+] EMBL BM606356 [ ccgCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTTAACGT CGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAA AT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACC GGGCTGCAC ]
[-] EMBL CNS08P6L [ TGTGAACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGAAACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCTGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTACGGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT Aatcg ]
[+] EMBL BX604492 [ AACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCGAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTT ]
[-] EMBL CNS08VJ8 [ ACAGACAGGTCGAGTGAAAATAT AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGGAGTGTCGCTCGGCAACCCGGTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAAAACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTCGCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTCTCCCGTATTCTTTTACACCCACACACACACG CTC TCCCCACACACAACTTG ]
[+] EMBL BX618342 [ GGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCAAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGACACTGCGTAGAAGTACGC ]
[-] EMBL CNS08Z4N [ GATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGTGAC TCGCAAGAAGA ]
[-] EMBL CNS08V92 [ CTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACCGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACAAACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCAACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT ATTGCGCAAGA ]
consensusID : consensus_9051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 747 fasta sequence
[AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA]
[+] EMBL AL933213 [AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA]
consensusID : consensus_9051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence
[CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC]
[+] EMBL BM641012 [CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9051#0 CAATAACGGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGAT 60
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 CTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACGAACACAAACACAAACG 120
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 CCCATCGCAAGGGTCCCACGAACTGGCTGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGC 180
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 CGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTCTTTGTTGTGCACT 240
consensus_9051#2 ---------------------------------------CCGCGGACG----CGTG-GGT 16
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 CGCTCCGAACGGAGTCAACGTCGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGC 300
consensus_9051#2 CGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGC 76
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 TGAATAAAGACACACACAGACAGGTCGAGTGAAAATATAAAAAAATGGCACTGCTACTCC 360
consensus_9051#2 TGAATAAAGACACACACAGACAGGTCGAGTGAAAATA--AAAAAATGGCACTGCTACTCC 134
consensus_9051#1 -------AGATCGCCCGAGGNTAGTCGAGTGAAAATA---AAAAATGGCACTGCTACTCC 50
*** * ** ************** ********************
consensus_9051#0 GTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 420
consensus_9051#2 GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 194
consensus_9051#1 GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 110
******************** ** ************************************
consensus_9051#0 ACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 480
consensus_9051#2 ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 254
consensus_9051#1 ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 170
********************* **************************************
consensus_9051#0 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACC 540
consensus_9051#2 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 314
consensus_9051#1 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 230
********************************************************** *
consensus_9051#0 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCG 600
consensus_9051#2 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 374
consensus_9051#1 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 290
************************************************* ** *******
consensus_9051#0 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 660
consensus_9051#2 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 434
consensus_9051#1 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 350
************************************************************
consensus_9051#0 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 720
consensus_9051#2 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 494
consensus_9051#1 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 410
************************************************************
consensus_9051#0 TGCTGGCCGATTACGTCGGTTCC-GGACCGCCGCAG-GGTACCGGGCTGCACCGGTACGT 778
consensus_9051#2 TGCTGGCCGATTACGTCGGTTCC-GGACCACCGCAG-GGTACCGGGCTGCACC------- 545
consensus_9051#1 TGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGT 470
*********************** ***** ****** ****************
consensus_9051#0 GTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAG 838
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 GTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGC 530
consensus_9051#0 GAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTGTGAAGGATTACGAGCTGGGCGT 898
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 AGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGG 590
consensus_9051#0 TCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACGACTACGTCCCGGAGCTGTACGC 958
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 GCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGC 650
consensus_9051#0 CACCTTTACGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAA 1018
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 TGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAG 710
consensus_9051#0 TCGTAAAACTCCCCTCCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATC 1078
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 GATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA----------------------- 747
consensus_9051#0 CTCTCACACCCACACACACACGCTCTCCCCACACACAACTTGTTTTTCGGTTCCATCCAC 1138
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 CGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAGTACTTCGCAAGAAG 1198
consensus_9051#2 ------------------------------------------------------------
consensus_9051#1 ------------------------------------------------------------
consensus_9051#0 AAACGGTAAAAAAAAAAAAAA 1219
consensus_9051#2 ---------------------
consensus_9051#1 ---------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||