cluster # 9070

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Anopheles gambiae
cluster # 9070 cluster # 9070 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9070#0 length = 1397 sequences # 6

consensus_9070#1 length = 1325 sequences # 6
consensus_9070#2 length = 551 sequences # 2

consensusID : consensus_9070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1397
fasta sequence

                              [CCGGTCGGGCAAGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCGATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCGCATTGTGAGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGCGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGAT-CCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGAT-CGAGGGCGACGT-GCTG--AAGGGTGCGGACTGTACCGCACCGCACACC-ACGCACTGTCTGCCGAACGGCAACATCATGATCTCGATCATGGGCGATGCGGAAGGCAATGCGAA-GGGTGACTTTGTCGAGTTCGACAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGATCGGAAAGCACTCTGCGGGTACGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCGTCGGAGTGGGGCGCACCGAAGCTGTTCCGCCGCGGCTACCACCCGACGGACTGTGACGATCGGACGCAGTACGGCTGCCGGCTGAACTTTTACCGCTGGCAGGAGCGCGAACTGTTCCAAACGATCGACCTCGGGGACGATGGGCTGACGCCGCTCGAGATACGCTTCCTGCACAATCCGCGCGAAAACCAGGGCTACGTTGGGTGCGCGTTCTATGCGAACGTGTACCGCTTCTACCAGAAGCCCGGCTCGGACGAGTACACCGCCGAAAAGGTGATCGATGTG-CCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCGCGCCTTACCGGGCAAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTATTTTTGAAGGGACGCC]

[+] EMBL BM582566             [CCGGTCGGGCAAGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCGATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCAGTCTTATTGTGCGGTGGTCTGGAGCAGC         AGCAACATGAGTGAATCCAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCAGTGGAGAAGCTGCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAACGGTGGACGTTGAT CCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACATACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM582092             [                                                    CCGCTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCGCATTGTGAGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGCGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGAT CCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGATCCGAGGGCGACGTGGCTGGAAAGGGTGCGGACTGTACCGCACCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX622430             [                                                                                                                                           GCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCGCATTGTGAGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGCGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGAT CCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGAT CGAGGGCGACGT GCTG  AAGGGTGCGGACTGTACCGCACCGCACACC ACGCACTGTCTGCCGAACGGCAACATCATGATCTCGATCATGGGCGATGCGGAAGGCAATGCGAA GGGTGACTTTGTCGAGTTCGACAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGATCGGAAAGCACTCTGCGGGTACGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCGTCNGAGTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX619440             [                                                                                                                                                                                                                                                                                                                                                    ACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGATNGGCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGAT CGAGGGCGACGT GCTG  AAGGGTGCGGACTGTACCGCACCGCACACCAACGCACTGTCTGCCGAACGGCAACATCATGATCTCGATCATGGGCGATGCGGAA GCAATGCGAAGGGGTGACTTTGTCCAGTCCGACAAGAACTTTGAGCTGGTCAGCACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX607599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGAT CGAGGGCGACGT GCTG  AAGGGTGCGGACTGTACCGCACCGCACACC ACGCACTGTCTGCCGAACGGCAACATCATGATCTCGGTCATGGGCGATGCGGAAGGCAATGCGAA GGGTGACTTTGTCGAGTTCGACAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGATCGGAAAGCACTCTGCGGGTATGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCGTCGGAGTGGGGCGCACCGAAGCTGTTCCGCCGCGGCTACCACCCGACGGACTGTGACGATCGGACGCAGTACGGCTGCCGGCTGAACTTTTACCGCTGGCAGGAGCGCGAACTGTTCCAAACGATCGACCTCGGGGACGATGGGCTGACGCCGCTCGAGATACGCTTCCTGCACAATCCGCGCGAAAACCAGGGCTACGTTGGGTGCGCGTTCTATGCGAACGTGTACCGCTTCTACCAGAAGCCCGGCTCGGACGAGTACACCGCCGAAAAGGTGATCGATGTG CCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCGC                                                                                                                   ]
[+] EMBL BM613059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGATCGGAAAGCACTCTGCGGGTACGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCGTCGGAGTGGGGCGCACCGAAGCTGTTCCGCCGCGGCTACCACCCGACGGACTGTGACGATCGGACGCAGTACGGCTGCCGGCTGAACTTTTACCGCTGGCAGGAGCGCGAACTGTTCCAAACGATCGACCTCGGGGACGATGGGCTGACGCCGCTCGAGATACGCTTCTTGCACAATCCGCGCGAAAACCAGGGCTACGTTGGGTGCGCGTTCTATGCGAACGTGTACCGCTTCTACCAGAAGCCCGGCTCGGACGAGTACACCGCCGAAAAGGTGATCGATGTGCCCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGCATGATGACGGACATACTGATCTCGCTGGACGATCGCTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCACGCCTTACCGGGCAAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTATTTTTGAAGGGACGCC]




>consensus_9070#0
CCGGTCGGGCAAGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTC
TCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCG
CGCTGGCCGATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGC
TGCCAGTCGCATTGTGAGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCA
AAGTGCAAATGCGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTG
GAGAAGCTGCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTAT
CTCGCTACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACG
TACACTAATAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGT
CACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTG
AACTCGGACCGCATCTTCGTGATCGATACCGGGACCGATCCTCGCGCACCCAAGCTCGCC
AAAGTGATCGAGGGCGACGTGCTGAAGGGTGCGGACTGTACCGCACCGCACACCACGCAC
TGTCTGCCGAACGGCAACATCATGATCTCGATCATGGGCGATGCGGAAGGCAATGCGAAG
GGTGACTTTGTCGAGTTCGACAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGAT
CGGAAAGCACTCTGCGGGTACGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCG
TCGGAGTGGGGCGCACCGAAGCTGTTCCGCCGCGGCTACCACCCGACGGACTGTGACGAT
CGGACGCAGTACGGCTGCCGGCTGAACTTTTACCGCTGGCAGGAGCGCGAACTGTTCCAA
ACGATCGACCTCGGGGACGATGGGCTGACGCCGCTCGAGATACGCTTCCTGCACAATCCG
CGCGAAAACCAGGGCTACGTTGGGTGCGCGTTCTATGCGAACGTGTACCGCTTCTACCAG
AAGCCCGGCTCGGACGAGTACACCGCCGAAAAGGTGATCGATGTGCCGGTGAAGAAGGTG
CAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCG
CTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGAC
ATCAGCGATCGGGCCAATCCGCGCCTTACCGGGCAAGGTGTTTCTGGGCGGTGCGATCCA
GCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGT
ATTTTTGAAGGGACGCC

consensusID : consensus_9070#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1325
fasta sequence

                              [CTGGATAGCAGCAGCAGCAGCAGCAGTAGCCGCATCGCATTCTCCCCGTA-GTCTTGTCGGGCATGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCTCATTGTGCGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAACAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACGAGTACACCGCCGAAAAGGTGATTAATGTGCCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCACGCCTTACCGGGCAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTGTTCTTGAAGGGACGCCGCCTGCTCGGGGGACCGCAGATGCTGCAGCTGTCGCTCGACGGTCGCCGGCTGTACGTGTCTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGTTCTATCCGGAGATGGTGGCGGCCGGCGGTACGATCGTGCAGCTGGACATCGACGTCGAGAACGGTGGCATGAAGCTGAACGAGAACTTCCTGGTGGACTTTGGCGGCGAACCGTACGGTCCAGGATTGCCACACGAGATGCGGTACCCTGGAGGCGATTGCACATCGGACATCTGGCTAGTTAATGAATGATACAGTCTGTTTCTTCTGTTTTTTTAGTATACATAGTTTTACAGGCATTCCATAATATTCAAGTGAAAACAAGGTTCAATTATCTGTCTGTTATCTGTTATCACAATTGAATAAATTACATTGAAAAATTTAAAAAAAA]

[+] EMBL CNS092KP             [CTGGATAGCAGCAGCAGCAGCAGCAGTAGCCGCATCGCATTCTCCCCGTA GTCTTGTCGGGCATGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCTCATTGTGCGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAACAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACGAGTACACCGCCGAAAAGGTGATTAATGTGCCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCACGCCTTACCGGGCAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCGAAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTGTTCTTGAAGGGACGCCGCCTGCTCGGGGGA CGCAGATGCTGCAGCTGTCGCTCGACGGTCGCCGGCTGTACGTGTCTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGTTCTATCCGGAGAT                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX602842             [                         GTAGCCGCATCGCATTCTCCCCGTAGGTCTTGTCGGGCATGACAAGCAATTTCCCTCACTTAATAGCAA AGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTTGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCAGTCTTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09D2W             [                              CGCATCGCATTCTCCCCGTA GTCTTGTCGGGCATGACAACCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATCGCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCCAATCGTTTATCGCTCCA TGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTCTCATTGTGCGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAACAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS092KQ             [                                                                                                                                                                                                                                                                                                                                                TTCGGAATGGTCCGGTGGAGAAGCTGCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTTTCTCGCAACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAACAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGACGAGTACACCGCCGAAAAGGTGATTGATGTGCCGGTGAAGAAGGTGCAGGGCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGCCAATCCACGCCTTACCGGGCAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTGTTCTTGAAGGGACGCCGCCTGCTCGGGGGACCGCAGATGCTGCAGCTGTCGCTCGACGGTCGCCGGCTGTACGTGTCTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGTTCTATCCGGAGATGGTGGCGGCCGGCGGTACGATCGTGCAGCTGGACATCGACGTCGAGAACGGTGGCATGAAGCTGAACGAGAACTTCCTGGTGGACTTTGGCGGCGAACCGTACGGTCCAGGATTGCCACACGAGATGCGGTACCCTGGAGGCGATTGCACATCGGACATCTGGCTAGTTAATGAATGATACAGTCTGTTTCTTCTGTTTTTTTAGTATACATAGTTTTACAGGCATTCCATAATATTCAAGTGAAAACAAGGTTCAATTATCTGTCTGTTATCTGTTATCACAATTGAATAAATTACATTGAAAAATTTA       ]
[-] EMBL CNS09D2X             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGACATCAGCGATCGGGCCAATCCACGCCTTACCGGGCAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTGTTCTTGAAGGGACGCCGCCTGCTCGGGGGACCGCAGATGCTGCAG TGTCGCTCGACGGTCGCCGGCTGTACGTGTCTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGTTCTATCCGGAGATGGTGGCGGCCGGCGGTACGATCGTGCAGCTGGACATCGACGTCGAGAACGGTGGCATGAAGCTGAACGAGAACTTCCTGGTGGACTTTGGCGGCGAACCGTACGGTCCA GATTGCCACACGAGATGCGGTACCCTGGAGGCGATTGCACATCGGACATCTGGCTAGTTAATGAATGATACAGTCTGTTTCTTCTGTTTTTTTAGTATAAATAGTTTTACAGGCATTCCATAATATTCAAGTGAAAACAAGG                                                                 ]
[-] EMBL AGA281098            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAACTTCTTGGTGGACTTTGGCGGCGAACCGTACGGTCCCGGGTTGCCACACGAGATGCGGTACCCTGGAGGCGATTGCACATCGGACATCTGGCTAGTTAATGAGTGATACAGTCTGTTTCTTCTGTTTTTTTAGTCTACATAGTTTTACAGGCATTCCATAATATTCAAGTGAAAACAAGGTGCAATTATCTGTCTGTTATCTGTTATCACAATTGAATAAATTACATTGAAAAATTTAAAAAAAA]




>consensus_9070#1
CTGGATAGCAGCAGCAGCAGCAGCAGTAGCCGCATCGCATTCTCCCCGTAGTCTTGTCGG
GCATGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATC
GCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCC
AATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTC
TCATTGTGCGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAA
ATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCT
GCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAAC
GGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAA
CAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGT
CCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGA
CGAGTACACCGCCGAAAAGGTGATTAATGTGCCGGTGAAGAAGGTGCAGGGCGAGAACGG
CGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGGACGATCGGTA
CCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCGGCAGTACGACATCAGCGATCGGGC
CAATCCACGCCTTACCGGGCAGGTGTTTCTGGGCGGTGCGATCCAGCGCGACGCGCCGAG
ACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTGTTCTTGAAGGGACG
CCGCCTGCTCGGGGGACCGCAGATGCTGCAGCTGTCGCTCGACGGTCGCCGGCTGTACGT
GTCTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGTTCTATCCGGAGATGGTGGCGGCCGG
CGGTACGATCGTGCAGCTGGACATCGACGTCGAGAACGGTGGCATGAAGCTGAACGAGAA
CTTCCTGGTGGACTTTGGCGGCGAACCGTACGGTCCAGGATTGCCACACGAGATGCGGTA
CCCTGGAGGCGATTGCACATCGGACATCTGGCTAGTTAATGAATGATACAGTCTGTTTCT
TCTGTTTTTTTAGTATACATAGTTTTACAGGCATTCCATAATATTCAAGTGAAAACAAGG
TTCAATTATCTGTCTGTTATCTGTTATCACAATTGAATAAATTACATTGAAAAATTTAAA
AAAAA

consensusID : consensus_9070#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 551
fasta sequence

                              [CAGATCGCCCGAGGTTANGAGTGTGATAGATCTCCGAAGACACGGTTGTGTNTTGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCAGTCTTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGTTGTACGTTGTGTGCGTACAG-CGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGATCGGTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACTGGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGATCGAGGGCGAC]

[+] EMBL AL696956             [CAGATCGCCCGAGGTTANGAGTGTGATAGATCTCCGAAGACACGGTTGTGTNTTGCGCTGGCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCAGTCTTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGTTGTACGTTGTGTGCGTACAG CGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAATAGCAAGCACAATGAGCTACACCACAGTGGTGGAACACCTGCTCCAGCTGTCACTTTGTCCCAGGCGGCAAGGAAGTGCCTACGCGCGATCGGTCGTACTGCCCTGCCTGAACTCGGACCGCATCTTCGTGATCGATACTGGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGATCGAGGGCGAC]
[+] EMBL AGA282725            [                                                                                              CCCCTTATCAAGTGCATTCGCTACCAGTCTTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCTGTTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCTACGGTGGACGTTGA                                                                                                                                                                                                                                             ]




>consensus_9070#2
CAGATCGCCCGAGGTTANGAGTGTGATAGATCTCCGAAGACACGGTTGTGTNTTGCGCTG
GCCAATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCA
GTCTTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTG
CAAATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAA
GCTGTTGTACGTTGTGTGCGTACAGCGAACCTGGACGAGGAGCATGGTGACTATCTCGCT
ACGGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACT
AATAGCAAGCACAATGAGCTACACCACAGTGGTGGAACACCTGCTCCAGCTGTCACTTTG
TCCCAGGCGGCAAGGAAGTGCCTACGCGCGATCGGTCGTACTGCCCTGCCTGAACTCGGA
CCGCATCTTCGTGATCGATACTGGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGA
TCGAGGGCGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9070#0      ----------------------------------------------------CCGGTCGG 8
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      CTGGATAGCAGCAGCAGCAGCAGCAGTAGCCGCATCGCATTCTCCCCGTAGTCTTGTCGG 60
                                                                                  

consensus_9070#0      GCAAGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATC 68
consensus_9070#2      ------------------------------------------------------CAGATC 6
consensus_9070#1      GCATGACAAGCAATTTCCCTCACTTAATAGCAACTGTCCCGCGTCCACTTTCTCGCAATC 120
                                                                               ***

consensus_9070#0      GCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCC 128
consensus_9070#2      GCC--CGAGGTTANGAGTGTGATAGATCTCCGAAGAC-ACGGTTGTGTNTTGCGCTGGCC 63
consensus_9070#1      GCAAACCAAACTCGGAGTGTGATAGATCTCCGAAGACGACGGTTGTGTCTCGCGCTGGCC 180
                      **   * *   *  *********************** ********** * *********

consensus_9070#0      GATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTC 188
consensus_9070#2      AATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTACCAGTC 123
consensus_9070#1      AATCGTTTATCGCTCCACTGTAGGAACAGGCCCCCTTATCAAGTGCATTCGCTGCCAGTC 240
                       **************************************************** ******

consensus_9070#0      GCATTGTGAGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAA 248
consensus_9070#2      TTATTGTGCGGTGGTCGGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAA 183
consensus_9070#1      TCATTGTGCGGTGGTCTGGAGCAGCAGCAGCAGTAGCAACATGAGTGAATCAAAGTGCAA 300
                        ****** ******* *******************************************

consensus_9070#0      ATGCGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCT 308
consensus_9070#2      ATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCT 243
consensus_9070#1      ATGTGGTCCGGGTTATGCAACACCGCTGGACGCGGTTCGGAATGGTCCGGTGGAGAAGCT 360
                      *** ********************************************************

consensus_9070#0      GCTGTACGTTGTATGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCTAC 368
consensus_9070#2      GTTGTACGTTGTGTGCGTACAGC-GAACCTGGACGAGGAGCATGGTGACTATCTCGCTAC 302
consensus_9070#1      GCTGTACGTTGTGTGCGTACAGCCGAACCTGGACGAGGAGCATGGTGACTATCTCGCAAC 420
                      * ********** ********** ********************************* **

consensus_9070#0      GGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAA 428
consensus_9070#2      GGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAA 362
consensus_9070#1      GGTGGACGTTGATCCCGCCAGTCCAACGTACTGTCAGGTTATCCATCGTACGTACACTAA 480
                      ************************************************************

consensus_9070#0      TAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGT 488
consensus_9070#2      TAGCAAGCACAATGAGCTACACCACAGTGG-TGGAACACCTGCTCCAGCTGTCACTTTGT 421
consensus_9070#1      CAGCAAGCACAATGAGCTACACCACAGTGGCTGGAACACCTGCTCCAGCTGTCACTTTGT 540
                       ***************************** *****************************

consensus_9070#0      CCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGA 548
consensus_9070#2      CCCAGGCGGCAAGGAAGTGCCTACGCGCGATCGG-TCGTACTGCCCTGCCTGAACTCGGA 480
consensus_9070#1      CCCAGGCGGCAAGGAAGTGCCTACGCGCGACCGGCTCGTACTGCCCTGCCTGAACTCGGA 600
                      ****************************** *** *************************

consensus_9070#0      CCGCATCTTCGTGATCGATACCGGG-ACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGA 607
consensus_9070#2      CCGCATCTTCGTGATCGATACTGGGGACCGATCCTCGCGCACCCAAGCTCGCCAAAGTGA 540
consensus_9070#1      CGAG---TACACCGCCGAAA--AGG---TGATTAATGTGCCGGTGAAGAAGGTGCAGGG- 651
                      *      * *     *** *   **    ***    * **     *    *    ** * 

consensus_9070#0      TCGAGGGCGACGTGCTGAAGGGTGCGGACTGTACCGCACCGCACACCACGCACTGTCTGC 667
consensus_9070#2      TCGAGGGCGAC------------------------------------------------- 551
consensus_9070#1      -CGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCT---CGC 707
                       ****  ** *                                                 

consensus_9070#0      CGAACGG-CAACATCATGATCTCGATCATGGGCGATGCGGAAGGCAATGCGAAGGGTGAC 726
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      TGGACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGATGTGCG-GCAGTACGAC 766
                                                                                  

consensus_9070#0      TTTGTCGAGTTCGACAAGAACTTTGAGCTGGTCGGCACCTGGTCCCGGGGTGATCGGAAA 786
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      ATCAGCGA--TCGGGCCAATCCACGCCTTACCGGGCAGGTGTTTCTGGG-CGGTGCGATC 823
                                                                                  

consensus_9070#0      GCACTCTGCGGGTACGATTACTGGTATCAGCCGCACTTTAACGTGATGGTCGCGTCGGAG 846
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      CAGCGCGACGCGC-CGAGACGCGTCCTCAAC--GATCCGGAGCTGAAGGAAGCACCGGAA 880
                                                                                  

consensus_9070#0      TGGGGCGCACCGAAGCTGTTCCGCC-GCGGCTACCACCCGACGGACTGTGACGATCGGAC 905
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      CCGGTGTTCTTGAAGGGACGCCGCCTGCTCGGGGGACCGCAGATGCTGCAGCTGTCGCTC 940
                                                                                  

consensus_9070#0      GCAGTACGGCTGCCGGCTGAACTTTTACCGCTGGCAGGAGCGCGAACTGTTCCAAACGAT 965
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      G----ACGGTCGCCGGCTGTACGTGT-CTTCGAGCCTGTTCTCGCCGTGGGACAAGCAGT 995
                                                                                  

consensus_9070#0      CGACCTCGGGGACGATGGGCTGACGCCGCTCGAGATACGCTTCCTG-CACAATCCGCGCG 1024
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      TCTATCCGGAGATGGTGG-CGGCCGGCGGTACGATCGTGCAGCTGGACATCGACGTCGAG 1054
                                                                                  

consensus_9070#0      AAAACCAGGGCTACGTTGGGTGCGCGTTCTATGCGAACGTGTACCGCTTCTACCAGAAGC 1084
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      AACGGTGGCATGAAGCTGAACGAGAACTTCCTG-----GTGGACTTTGGCGGCGAACCGT 1109
                                                                                  

consensus_9070#0      CCGGCTCGGACGAGTACACCGCCGAAAAGGTGATCGATGTGCCGGTGAAGAAGGTGCAGG 1144
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      ACGGTCCAG--GATTGCCACAC----GAGATG--CGGTACCCTGGAGGCGATTGCACATC 1161
                                                                                  

consensus_9070#0      GCGAGAACGGCGAGATCGAAATGATGGGCGGTATGATGACGGACATACTGATCTCGCTGG 1204
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      GGACATCTGGCTAGTT---AATGA--------ATGAT-----ACAGTCTGTTTCTTCTGT 1205
                                                                                  

consensus_9070#0      ACGATCGGTACCTGTACTTTAGCAACTGGCGGCATGGTGAT-GTGCGGCAGTACGACATC 1263
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      TTTTTTAGTATACATAGTTTTACAGGCATTC-CATAATATTCAAGTGAAAACAAGGT-TC 1263
                                                                                  

consensus_9070#0      AGCGATCGGGCCAATCCGCGCCTTACCGGGCAAGGTGTTTCTGGGCGGTGCGATCCAGCG 1323
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      AATTATCTGTCTGTTATCTGTTATCACAATTGAATAAATTACA--TTGAAAAATTTAAAA 1321
                                                                                  

consensus_9070#0      CGACGCGCCGAGACGCGTCCTCAACGATCCGGAGCTGAAGGAAGCACCGGAACCGGTATT 1383
consensus_9070#2      ------------------------------------------------------------
consensus_9070#1      AAAA-------------------------------------------------------- 1325
                                                                                  

consensus_9070#0      TTTGAAGGGACGCC 1397
consensus_9070#2      --------------
consensus_9070#1      --------------