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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1050 fasta sequence
[AACAACAAGCAGCACGCTTCTTCGTAATTCAGTATTGAATTTTCTTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGC-GGCCAGCGGCGGAAAGGACAG--C--ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC-GGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC-GGCGATAC-GGCAC-GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT-CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGCGAACGGATGGTGGCACTGCAGGACCAG]
[+] EMBL CNS08RO9 [AACAACAAGCAGCACGCTTCTTCGTAATTCAGTATTGAATTTTCTTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATA C GTCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGACCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACC GGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGC CTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAA CGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT TCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTG ]
[+] EMBL CNS08HCF [ CAACAAGCAGCACGCTTCTTCGTAATTCAGTATTGAATTTTCTTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGCGGGCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGACCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGC CTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAA CGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCG ]
[+] EMBL CNS09JSP [ ctggaAGCACAAAGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGC GGCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAG GCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCACGGATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAA CGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTTCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGCGAACGGATGGTGGCACTGCAGGACCAG]
[+] EMBL CNS0959S [ GTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATA C GCCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGG GCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAA CGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTC ]
[+] EMBL CNS08S72 [ CGGCGACCAAAAACGGGCGATACGCTCTGCAAGGGATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAG GGCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACC GGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGC ]
[+] EMBL BM582368 [ GCTCTGCAAGGAATGTTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGACGGGCGAGAAGGTAGCGATAGC GGCCAGCGGCGGAAAGGACAG C ACCGTGCTGGCGCACGTGATGAACCTGTTAAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGTCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGT ]
[-] EMBL CNS08ROA [ AGCAGGGGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGC GGCCAGCGGCGGAAAGGACAG ACAACCCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGACCTGGGGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTTTGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGCGGGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTTTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
[-] EMBL CNS09JSQ [ GTTCCGGCCGGGCGAAAAGGTAGCGATAGC GGCCAGCGGCGGAAAGGACAG CCAACC CTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCCCAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
[-] EMBL CNS08QAF [ CCGGGCGAAAAGGTAGCGATAGC GGCCAGCGGCGGAAAGGACAGGCC ACC CTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGCGCCCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAGGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
[-] EMBL CNS0959T [ aACAG CCAACCG TGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGTTCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGAACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGCGGGCGATACGGGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGTCCCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
[-] EMBL CNS08HCG [ TGGACAAGCGCTACAACTACGGCCTAGACCTGGGGCTGGTGTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
[-] EMBL CNS08S73 [ CCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCG ACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGC GGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGC GGCGATAC GGCAC GATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACCGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGT CCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCTGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGC ]
consensusID : consensus_9076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 965 fasta sequence
[CTGGTACACCCCCCGCTTCTTCGTAATTCAGTATTGAATTTTCTTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGCGCTCCAGCGGCGGAAAGGACAGCACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGAATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGCGGCGTGTTCCGCCGGCAGGCCCCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGCGGCGATACGGCACGATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAGGGGCACGGTGAAGAAGCCTGTCCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCT]
[+] EMBL CNS08QAE [CTGGTACACCCCCCGCTTCTTCGTAATTCAGTATTGAATTTTCTTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGGCGACCAAAAACGGGCGATACGCTCTGCAAGGAATGCTTCTTCCTTGCGTTCGAGACGGAAATACACAACACCATCCAGCAGGAGCAGCTGTTCCGGCCGGGCGAAAAGGTAGCGATAGCGCTCCAGCGGCGGAAAGGACAGCACCGTGCTGGCGCACGTGATGAACCTGTTGAACAAGCGCTACAACTACGGCCTAGATCTGGTGCTGCTGTCCATCGACGAGGGAATCACCGGGTACCGGACGACAGCCTGAAAACGGTGGCCCAAAACCGGGACGACTATGGAATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTACGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTGCGGCGTGTTCCGCCGGCAGGCCCCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGTGGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGCGGCGATACGGCACGATTGCGACGCTGCTGCGATATCAAAACGGGATCCAAAGAGGCGGACACGATCCCTCGGGTGAAACGCTTAAGTATAGCTACGAGAAAGAGATCGTGATGTACGCACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACCGGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGGACATCATTCATGCCGGCGAGCAGCTGCAAATCAGGGGCACGGTGAAGAAGCCTGTCCGCGGGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGCT]
consensusID : consensus_9076#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 729 fasta sequence
[CAGCAGATCACCCGCGGTTAAAAGCAGCACGCTTGTTCGTCCNTTCAGTATTTTCTTTAACTTTCCTTAGCACAATGCCAGTCCCCTGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGTGNTGACAAAAACGGGCGATACGCTCTGCAAGGAATGTAATCTATACCTATGCGTTCTGAGACGGAAATACACAACACCATACCAGCAGTGAGCAGCTGTTACCTGGACAGNCGAANAAGGTAGCTGATAGCAGCCAGCGGCCGGAACAGTGACAGCACCGNTGCTGGCTGCACGTGATGAACCTGTATGAACGAAAGCTGCTCACAACCTAACGAGCCTAAGATACTNGGTTGCTAGACATGTACACATACGAACGAATGGNAATACACCTGGGAGTTAACCTGGGAANAGACAATGGACCCTGAACAAACGGGATNGGNCCACACACACACCGNNGGACCAGGAACATACATTTAGNAGGCCATTAGCACCAGGCATNNGGCCAGACCCGTAAACNNTTACATTCACCAATNCAACGACCAACGCGAAAANGACTNTAGGTCAACCATGGGNNTNAGTGGAACCGAGCAAATTAGNGGGATACCCCGGACCAATACACNGANTCGGAGCGACACAGCACTNANNAGNGCCCCCCGNCAGCACCCCAAAGCCNAAAACAGACCAANCTACACAACCTACGGCGGANCGAACGTACGNTACACCCCAG]
[+] EMBL AL929938 [CAGCAGATCACCCGCGGTTAAAAGCAGCACGCTTGTTCGTCCNTTCAGTATTTTCTTTAACTTTCCTTAGCACAATGCCAGTCCCCTGTGGAAGTAGCTGTGGTCGCAATGCTTTCATGCGTGNTGACAAAAACGGGCGATACGCTCTGCAAGGAATGTAATCTATACCTATGCGTTCTGAGACGGAAATACACAACACCATACCAGCAGTGAGCAGCTGTTACCTGGACAGNCGAANAAGGTAGCTGATAGCAGCCAGCGGCCGGAACAGTGACAGCACCGNTGCTGGCTGCACGTGATGAACCTGTATGAACGAAAGCTGCTCACAACCTAACGAGCCTAAGATACTNGGTTGCTAGACATGTACACATACGAACGAATGGNAATACACCTGGGAGTTAACCTGGGAANAGACAATGGACCCTGAACAAACGGGATNGGNCCACACACACACCGNNGGACCAGGAACATACATTTAGNAGGCCATTAGCACCAGGCATNNGGCCAGACCCGTAAACNNTTACATTCACCAATNCAACGACCAACGCGAAAANGACTNTAGGTCAACCATGGGNNTNAGTGGAACCGAGCAAATTAGNGGGATACCCCGGACCAATACACNGANTCGGAGCGACACAGCACTNANNAGNGCCCCCCGNCAGCACCCCAAAGCCNAAAACAGACCAANCTACACAACCTACGGCGGANCGAACGTACGNTACACCCCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9076#0 ---------------AACAACAAGCAGCACGCTTCTTCGTA-ATTCAGTATTGAATTTTC 44
consensus_9076#1 ----------------CTGGTACACCCCCCGCTTCTTCGTA-ATTCAGTATTGAATTTTC 43
consensus_9076#2 CAGCAGATCACCCGCGGTTAAAAGCAGCACGCTTGTTCGTCCNTTCAGTAT-----TTTC 55
* * * ***** ***** ******** ****
consensus_9076#0 TTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTT 104
consensus_9076#1 TTCGATTTTCCTTAGCACAATGCCAGTCCCATGTGGAAGTAGCTGTGGTCGCAATGCTTT 103
consensus_9076#2 TTTAACTTTCCTTAGCACAATGCCAGTCCCCTGTGGAAGTAGCTGTGGTCGCAATGCTTT 115
** * ************************ *****************************
consensus_9076#0 CATGCG-GCGACCAAAAACGGGCGATACGCTCTGCAAGGAATG----CTTCTTCCTTGCG 159
consensus_9076#1 CATGCG-GCGACCAAAAACGGGCGATACGCTCTGCAAGGAATG----CTTCTTCCTTGCG 158
consensus_9076#2 CATGCGTGNTGACAAAAACGGGCGATACGCTCTGCAAGGAATGTAATCTATACCTATGCG 175
****** * ******************************* ** * ****
consensus_9076#0 TTC-GAGACGGAAATACACAACACCAT-CCAGCAG-GAGCAGCTGTT--CCGGCCGGGCG 214
consensus_9076#1 TTC-GAGACGGAAATACACAACACCAT-CCAGCAG-GAGCAGCTGTT--CCGGCCGGGCG 213
consensus_9076#2 TTCTGAGACGGAAATACACAACACCATACCAGCAGTGAGCAGCTGTTACCTGGACAGNCG 235
*** *********************** ******* *********** * ** * * **
consensus_9076#0 AAAA-GGTAGC-GATAGCGG-CCAGCGGCGGAAAG---GACAGCACCGT-GCTGGC-GCA 266
consensus_9076#1 AAAA-GGTAGC-GATAGCGCTCCAGCGGCGGAAAG---GACAGCACCGT-GCTGGC-GCA 266
consensus_9076#2 AANAAGGTAGCTGATAGCAG-CCAGCGGCCGGAACAGTGACAGCACCGNTGCTGGCTGCA 294
** * ****** ****** ******** * ** ********** ****** ***
consensus_9076#0 CGTGATGAACCTGT-TGAACAAGCGCT----ACAACT--ACG-GCCTA-GATCTGGTGCT 317
consensus_9076#1 CGTGATGAACCTGT-TGAACAAGCGCT----ACAACT--ACG-GCCTA-GATCTGGTGCT 317
consensus_9076#2 CGTGATGAACCTGTATGAACGAAAGCTGCTCACAACCTAACGAGCCTAAGATACTNGGTT 354
************** ***** * *** ***** *** ***** *** * *
consensus_9076#0 GCT------GTCCATCGACGAGGGAATCACCGGGTACCGGGACGACAGCCTGAAAACGGT 371
consensus_9076#1 GCT------GTCCATCGACGAGGGAATCACCGGGTACCGG-ACGACAGCCTGAAAACGGT 370
consensus_9076#2 GCTAGACATGTACACATACGAACGAATGGNAATACACCTGGGAGTTAACCTGGGAANAGA 414
*** ** ** **** **** *** * * * **** ** *
consensus_9076#0 GGCCCAAAACCGGGACGACTATGGCATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTA 431
consensus_9076#1 GGCCCAAAACCGGGACGACTATGGAATGCCGTTGCGCGTACTATCGTACCAGGAGCTGTA 430
consensus_9076#2 CAAT-GGACCCTGAACAAACGGGATNGGNCCACACACACACCGNNGGACCAGGAAC-ATA 472
* ** * ** * * * * * * ** * ******* * **
consensus_9076#0 CGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTG 491
consensus_9076#1 CGGGTGGACGATGGATCGCATAGTGGCGGAGATAGGCCGCAGCAACAATTGCACTTTCTG 490
consensus_9076#2 CATTTAGNAGGCCATTAGCACCAGGCATNNGGCCAGACCCGTAAACNNTTACATTCACCA 532
* * * * * *** * * * * * *** ** ** * *
consensus_9076#0 CGGCGTGTTCCGCCGGCAGGCGCTCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGT 551
consensus_9076#1 CGGCGTGTTCCGCCGGCAGGC-CCCGATCGTGGCGCACGCTTGATGGAGGTCGACTGTGT 549
consensus_9076#2 A-------TNCAACGACCAAC--GCGAAAANGACTNTAGGTCAACCATGG--GNNTNAGT 581
* * ** * * *** * * * * * ** * * **
consensus_9076#0 GGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGCGG 611
consensus_9076#1 GGCTACGGGCCACAATGCGGACGACATTGCGGAAACCGTCATCATGAACATCCTGCGCGG 609
consensus_9076#2 GGAACCGAGCA--AATTAGNGGGATACCCCGGA--CCAATACACNGANT------CGGAG 631
** ** ** *** * ** * **** ** * ** ** *
consensus_9076#0 CGATACGGCAC-GATTGCGACGCTGCTGCGATATC--AAAACGGGATCCAAAGAGGCGGA 668
consensus_9076#1 CGATACGGCAC-GATTGCGACGCTGCTGCGATATC--AAAACGGGATCCAAAGAGGCGGA 666
consensus_9076#2 CGACACAGCACTNANNAGNGCCCCCCGNCAGCACCCCAAAGCCNAAAACAGACCAANCTA 691
*** ** **** * * * * * * * *** * * ** * *
consensus_9076#0 CACGATCCCTCGGGTGAAACCGCTTAAGTATA-GCTACGAGAAAGAGATCGTGATGTACG 727
consensus_9076#1 CACGATCCCTCGGGTGAAAC-GCTTAAGTATA-GCTACGAGAAAGAGATCGTGATGTACG 724
consensus_9076#2 CACAA--CCTACGGCGGANC-----GAACGTACGNTACACCCCAG--------------- 729
*** * *** ** * * * * ** * *** **
consensus_9076#0 CACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACC 787
consensus_9076#1 CACACTTCAAGAAGCTGGTCTACTTCTCGACCGAATGTGTCTTTGCTCCGAACGCGTACC 784
consensus_9076#2 ------------------------------------------------------------
consensus_9076#0 GGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGG 847
consensus_9076#1 GGGGCCATGCGCGGGCGTTTTTGAAAGATCTGGAAAAGGTGCGCCCATCGGCCATCATGG 844
consensus_9076#2 ------------------------------------------------------------
consensus_9076#0 ACATCATTCATGCCGGCGAGCAGCTGCAAATCAAGGGCACGGTGAAGAAGCCTGTCCGCG 907
consensus_9076#1 ACATCATTCATGCCGGCGAGCAGCTGCAAATCAGGGGCACGGTGAAGAAGCCTGTCCGCG 904
consensus_9076#2 ------------------------------------------------------------
consensus_9076#0 GGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGC 967
consensus_9076#1 GGGTGTGTGGCCGGTGCGGGTTCGTCTCGTCCCAGCAGCCGTGCAAGGCGTGTGTGCTGC 964
consensus_9076#2 ------------------------------------------------------------
consensus_9076#0 TGGAAGGGCTAAACCGTGGATTGCCCAAGTTAGGCATCGGGAAGAAGTCGAAGGGCGAAC 1027
consensus_9076#1 T----------------------------------------------------------- 965
consensus_9076#2 ------------------------------------------------------------
consensus_9076#0 GGATGGTGGCACTGCAGGACCAG 1050
consensus_9076#1 -----------------------
consensus_9076#2 -----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||