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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2584 fasta sequence
[CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT--ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCATATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACATTCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGCGGGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCGATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGGAGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCCCCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAA-CCTTCCTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACCGGGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGCATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG]
[-] EMBL BM645000 [CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGcgg ]
[-] EMBL BX620260 [ CACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAACCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTAACATGCATGCTAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACATCCTCCNCNCCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTTAATTGGTTCGATCC ]
[-] EMBL BX622770 [ TAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACAACGGTGATGGCCATCAACCATCAACCAATAGAATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCATATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCT ]
[-] EMBL BX627286 [ GGTGATGNCCATCANCCATCAACCAATAGTATCATGCATGCCAAAAACATCNTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGA TTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTG TTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTCTTTCGTAGTT ]
[-] EMBL BM640167 [ TTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCACCATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACATTCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATcgg ]
[-] EMBL BM637111 [ CTCACATTCACATATACTTCTCTTTCTCTTAGTTATGACACGCACGCACTCACACCATAT CCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGCGG ]
[-] EMBL BM638231 [ ATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGTAAGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCGATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGGAGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCCCCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCATACAAAACTAAACCCTTCCTCTGTGTG CACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCcgg ]
[+] EMBL AGA285271 [ ATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAA CCTTCCTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTTGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCAAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGC ]
[-] EMBL BM649257 [ taAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAC CCTTCCTCTGTGTAAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGCTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACCGG ]
[-] EMBL AGA283975 [ TGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCGATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACACTGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGCATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG]
consensusID : consensus_9127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 797 fasta sequence
[CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCGGCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTGNGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTAGGNTANTAGGGTTAAGGTTGAGGCCGGNGCCAGGGTAGGACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCACCAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGCCGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTACTATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGTTAAACTCTCGTTAGTGTTTTCAAATCCATGTGAAAATCTAATTTAAGGTACGCGCATTTTATATTACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT]
[-] EMBL AL694946 [CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCGGCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTGNGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTAGGNTANTAGGGTTAAGGTTGAGGCCGGNGCCAGGGTAGGACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCACCAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGCCGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTACTATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGTTAAACTCTCGTTAGTGTTTTCAAATCCATGTGAAAATCTAATTTAAGGTACGCGCATTTTATATTACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT]
consensusID : consensus_9127#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence
[ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACTTATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTACATCTATCTTACAAGAATAGTAGTACACAACAGAGACTGAANNNAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATACAAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC]
[-] EMBL BX467173 [ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACTTATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTACATCTATCTTACAAGAATAGTAGTACACAACAGAGACTGAANNNAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATACAAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC]
consensusID : consensus_9127#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence
[TATGGCCCTGGTGGGATTTTTTTACATCTATCTTGACAAGAATAGTAGTAAACAACAGAGACTGAANNGANAGACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTCCTCGTGCGCGATTCTGCC]
[-] EMBL BX467509 [TATGGCCCTGGTGGGATTTTTTTACATCTATCTTGACAAGAATAGTAGTAAACAACAGAGACTGAANNGANAGACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTCCTCGTGCGCGATTCTGCC]
consensusID : consensus_9127#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence
[TAAAGTGTGCGCAAAAGATGACAAAAAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAAAAAAGAAGGTTTGTTTTTCTCTTCTTGTGATAGCAGCAGCACGAGGCGCACGTACGCCGTGCGAACCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACATAAAAACTGCATCATGCTANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT]
[-] EMBL BX619187 [TAAAGTGTGCGCAAAAGATGACAAAAAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAAAAAAGAAGGTTTGTTTTTCTCTTCTTGTGATAGCAGCAGCACGAGGCGCACGTACGCCGTGCGAACCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACATAAAAACTGCATCATGCTANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATG 60
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTC 120
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAA 180
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACG 240
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 -------------ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACT 47
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 --------------CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCG 46
consensus_9127#0 GTGATGGCCATCAACCATCAACCAATAG-TATCATGCATGC-CAAAAACATCCTATTACT 298
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 TATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTG 107
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 GCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTG 106
consensus_9127#0 AT--GACCCCGCCCGTCAGCAGCATCCATCATCATCACCACC---ACCACACCACCTGTG 353
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 CTTTCACCATGGTTACGACGATCAGGTCGATTATATGG-GC-TG-GTGGGATTTTTTTAC 164
consensus_9127#3 ---------------------------------TATGG-CCCTG-GTGGGATTTTTTTAC 25
consensus_9127#1 NGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTA-GGNTANTAGGGTTAA 165
consensus_9127#0 CTTTCACCATGGTTACGACGATCAGGTCGATTATATGG-GCTGG-TGGGATTTTTTTTAC 411
consensus_9127#4 -----------------------------------TAAAGTGTGCGCAAAAGATGACAAA 25
* *
consensus_9127#2 ATCTATCTT-ACAAGAATAGTAGT-ACACAACAGAGA-CTGAANNNAAA--CTGCACCCC 219
consensus_9127#3 ATCTATCTTGACAAGAATAGTAGT-AAACAACAGAGA-CTGAANNGANAGACTGCACCCC 83
consensus_9127#1 GGTTGAGGCCGGNGCCAGGGTAGG-ACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCAC 224
consensus_9127#0 ATCTATCTT-ACAAGAATAGTAGT-AAACAACAGAGA-CTGAAAAAAA---CTGCACCCC 465
consensus_9127#4 AAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAA 85
* * * * * *
consensus_9127#2 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 271
consensus_9127#3 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 135
consensus_9127#1 CAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGC 284
consensus_9127#0 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 517
consensus_9127#4 AAA------AGAAGGTTT--GTTTTTCTCTTCTTGTGATAGCA---GCAGCACG---AGG 131
* * ** * * * * * * * * *** **
consensus_9127#2 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 322
consensus_9127#3 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 186
consensus_9127#1 CGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTAC 344
consensus_9127#0 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 568
consensus_9127#4 CGCACGTACGCCGT-GCGAACCCACACACATACA-CACACACACTTACCCACACGGG-GT 188
**** ** ** ** * ** * ********* *** **
consensus_9127#2 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 379
consensus_9127#3 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 243
consensus_9127#1 TATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 404
consensus_9127#0 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 625
consensus_9127#4 TACCTTCTATATTTT-----ATGTTCC-TGCTCTTTGCTA-CGCCTGATTATTGTTGCTC 241
* ** * ** * *** * * *** * ** ** *** * *
consensus_9127#2 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 434
consensus_9127#3 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 298
consensus_9127#1 ATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGT--TAAAC 462
consensus_9127#0 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 680
consensus_9127#4 ACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATA 301
* ** * ** * * *** *** ** * * * * * * * *
consensus_9127#2 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 491
consensus_9127#3 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 355
consensus_9127#1 TCTCGTTAGTGTTTTCAAATCCATGTG-AAAATCTAATTTAAGGTACGCGCATTTTATAT 521
consensus_9127#0 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 737
consensus_9127#4 TTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACAT 361
* * *** *** * * ** * * * * ** * *** * * **
consensus_9127#2 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 549
consensus_9127#3 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 413
consensus_9127#1 TACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 581
consensus_9127#0 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCAT 795
consensus_9127#4 AAAAACTGCATCATGCT--ANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT---- 415
* ** * * * * *** ** ** ** * * * *
consensus_9127#2 ATTGTGTTGCTGTTTT--TTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATAC 607
consensus_9127#3 CCTCGTGCGCGATTCT--GCC--------------------------------------- 432
consensus_9127#1 ATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACAC-ATACAAGC 640
consensus_9127#0 ATTGTGTTGCTGTTTT--TTGCACATTTCAATTCCCTACCCTACCCTACAC-ATACAAGC 852
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 AAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC---------------------- 645
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 TATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGC 700
consensus_9127#0 TATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGC 912
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 TGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTG 760
consensus_9127#0 TGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTG 972
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 CAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT----------------------- 797
consensus_9127#0 CAACATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTC 1032
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACAT 1092
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCC 1152
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACA 1212
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTT 1272
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 ATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTA 1332
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTAC 1392
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGT 1452
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATG 1512
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGG 1572
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAA 1632
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CTATGTACATAAAAAAGCGGGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCG 1692
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 ATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGG 1752
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCC 1812
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAACCTTC 1872
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGC 1932
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 AAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTA 1992
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACC 2052
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCA 2112
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTAC 2172
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATAT 2232
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGA 2292
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGG 2352
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 TGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCA 2412
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 CCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACT 2472
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ------------------------------------------------------------
consensus_9127#3 ------------------------------------------------------------
consensus_9127#1 ------------------------------------------------------------
consensus_9127#0 GGCCACCGGGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGC 2532
consensus_9127#4 ------------------------------------------------------------
consensus_9127#2 ----------------------------------------------------
consensus_9127#3 ----------------------------------------------------
consensus_9127#1 ----------------------------------------------------
consensus_9127#0 ATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG 2584
consensus_9127#4 ----------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||